Wall clock time and date at job start Sat Mar 6 2021 16:08:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 C 1.36410 * 125.80177 * 2 1 4 4 C 1.47375 * 127.19259 * 0.02562 * 3 2 1 5 5 O 1.21613 * 120.00174 * 359.97438 * 4 3 2 6 6 N 1.34782 * 120.00397 * 179.97438 * 4 3 2 7 7 C 1.46495 * 120.00265 * 179.97438 * 6 4 3 8 8 H 1.08999 * 112.84703 * 25.33319 * 7 6 4 9 9 C 1.53783 * 113.61458 * 156.52708 * 7 6 4 10 10 C 1.53780 * 87.08188 * 89.11462 * 9 7 6 11 11 H 1.09000 * 113.62059 * 270.80343 * 10 9 7 12 12 C 1.50704 * 113.61301 * 139.97988 * 10 9 7 13 13 C 1.38243 * 119.97244 * 299.72970 * 12 10 9 14 14 C 1.38207 * 120.02392 * 179.72257 * 13 12 10 15 15 C 1.38457 * 119.97198 * 0.57639 * 14 13 12 16 16 F 1.35096 * 120.02729 * 179.68121 * 15 14 13 17 17 C 1.38465 * 119.94954 * 359.69895 * 15 14 13 18 18 C 1.38203 * 119.97038 * 0.02562 * 17 15 14 19 19 C 1.53774 * 113.61768 * 254.13552 * 7 6 4 20 20 C 1.47023 * 105.61475 * 179.97438 * 3 2 1 21 21 C 1.34168 * 105.95640 * 359.97438 * 20 3 2 22 22 C 1.50694 * 125.44155 * 179.97438 * 21 20 3 23 23 O 1.42901 * 109.47118 * 64.99901 * 22 21 20 24 24 Si 1.86298 * 109.47775 * 185.00146 * 22 21 20 25 25 O 1.33657 * 125.79967 * 180.28121 * 2 1 3 26 26 H 1.09002 * 109.47314 * 90.00264 * 1 2 3 27 27 H 1.09009 * 109.47171 * 209.99991 * 1 2 3 28 28 H 1.08997 * 109.47582 * 330.00177 * 1 2 3 29 29 H 0.97002 * 119.99432 * 359.97438 * 6 4 3 30 30 H 1.08998 * 113.61690 * 203.66584 * 9 7 6 31 31 H 1.09005 * 113.61035 * 334.57197 * 9 7 6 32 32 H 1.08004 * 119.99104 * 359.97438 * 13 12 10 33 33 H 1.07993 * 120.01352 * 180.25218 * 14 13 12 34 34 H 1.07995 * 120.01324 * 179.97438 * 17 15 14 35 35 H 1.08000 * 119.98357 * 179.97438 * 18 17 15 36 36 H 1.08996 * 113.61507 * 25.43139 * 19 7 6 37 37 H 1.09003 * 113.61768 * 156.34022 * 19 7 6 38 38 H 1.08002 * 127.01710 * 179.97438 * 20 3 2 39 39 H 1.09004 * 109.47407 * 305.00258 * 22 21 20 40 40 H 0.96708 * 114.00246 * 180.02562 * 23 22 21 41 41 H 1.48506 * 109.99834 * 300.00486 * 24 22 21 42 42 H 1.48502 * 110.00011 * 61.31751 * 24 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3050 1.1063 0.0000 4 6 1.8739 2.5157 0.0005 5 8 0.6890 2.7891 0.0006 6 7 2.7930 3.5015 0.0010 7 6 2.3645 4.9024 0.0009 8 1 1.3724 5.0415 0.4303 9 6 3.4200 5.8695 0.5627 10 6 3.9665 5.9810 -0.8704 11 1 4.7242 5.2345 -1.1083 12 6 4.3823 7.3787 -1.2509 13 6 3.4540 8.4031 -1.2380 14 6 3.8355 9.6864 -1.5811 15 6 5.1451 9.9435 -1.9494 16 9 5.5177 11.1963 -2.2912 17 6 6.0727 8.9156 -1.9674 18 6 5.6902 7.6343 -1.6183 19 6 2.5531 5.6043 -1.3542 20 6 3.6849 0.5990 0.0006 21 6 3.5859 -0.7390 0.0015 22 6 4.7458 -1.7011 0.0019 23 8 5.4762 -1.5661 1.2227 24 14 4.1069 -3.4445 -0.1500 25 8 2.2888 -1.0840 -0.0053 26 1 -0.3634 0.0000 -1.0277 27 1 -0.3634 -0.8901 0.5139 28 1 -0.3634 0.8899 0.5138 29 1 3.7382 3.2834 0.0013 30 1 3.0004 6.8005 0.9437 31 1 4.1148 5.4006 1.2595 32 1 2.4312 8.2012 -0.9558 33 1 3.1111 10.4872 -1.5671 34 1 7.0944 9.1150 -2.2548 35 1 6.4134 6.8323 -1.6327 36 1 2.5486 4.9217 -2.2039 37 1 1.8970 6.4631 -1.4963 38 1 4.5927 1.1840 0.0004 39 1 5.4016 -1.4799 -0.8402 40 1 6.2391 -2.1564 1.2919 41 1 3.2114 -3.7585 0.9923 42 1 3.3725 -3.6066 -1.4305 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10466350_13308374.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:08:51 Heat of formation + Delta-G solvation = -40.311266 kcal Electronic energy + Delta-G solvation = -27162.083905 eV Core-core repulsion = 22990.866477 eV Total energy + Delta-G solvation = -4171.217428 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 332.126 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -49.92430 -43.90859 -41.54133 -40.21166 -38.64168 -37.88135 -34.83751 -34.06560 -33.25346 -32.12937 -31.34929 -29.51690 -26.71260 -26.55929 -25.54974 -24.41186 -23.96402 -22.78997 -22.21196 -20.89881 -20.05829 -18.83496 -18.70985 -18.49104 -17.50223 -17.41098 -17.22512 -16.97351 -16.66908 -16.62663 -15.97649 -15.87765 -15.79990 -15.40375 -15.19351 -14.73359 -14.48082 -14.35514 -14.21596 -14.19954 -14.18038 -13.96434 -13.92445 -13.64204 -13.42775 -13.16336 -12.92640 -12.61593 -12.22003 -12.20540 -11.86476 -11.69184 -11.25666 -11.20349 -11.04368 -10.46508 -10.17055 -10.06876 -9.68009 -9.48965 -5.09014 0.08642 0.11786 0.26428 0.72398 1.16604 1.41093 1.63369 2.01061 2.04280 2.14495 2.55091 3.14529 3.29530 3.43931 3.60172 3.62124 3.65462 3.67137 3.72898 3.81779 3.95125 3.96045 4.04069 4.19441 4.24718 4.31966 4.37608 4.41196 4.44464 4.53850 4.60142 4.69002 4.76778 4.84977 4.88495 4.99669 5.01274 5.03827 5.04538 5.12410 5.14026 5.18426 5.27910 5.48756 5.64115 5.77928 5.91863 6.42017 6.85047 7.09115 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.085 4.085 2 C 0.074 3.926 3 C -0.263 4.263 4 C 0.593 3.407 5 O -0.572 6.572 6 N -0.691 5.691 7 C 0.114 3.886 8 H 0.088 0.912 9 C -0.124 4.124 10 C -0.063 4.063 11 H 0.115 0.885 12 C -0.081 4.081 13 C -0.091 4.091 14 C -0.160 4.160 15 C 0.064 3.936 16 F -0.156 7.156 17 C -0.159 4.159 18 C -0.088 4.088 19 C -0.143 4.143 20 C -0.137 4.137 21 C -0.038 4.038 22 C -0.033 4.033 23 O -0.559 6.559 24 Si 0.802 3.198 25 O -0.194 6.194 26 H 0.100 0.900 27 H 0.091 0.909 28 H 0.103 0.897 29 H 0.414 0.586 30 H 0.104 0.896 31 H 0.088 0.912 32 H 0.149 0.851 33 H 0.142 0.858 34 H 0.144 0.856 35 H 0.155 0.845 36 H 0.067 0.933 37 H 0.100 0.900 38 H 0.189 0.811 39 H 0.131 0.869 40 H 0.414 0.586 41 H -0.310 1.310 42 H -0.296 1.296 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.552 -4.347 -0.266 7.867 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.140 4.140 2 C 0.021 3.979 3 C -0.268 4.268 4 C 0.382 3.618 5 O -0.453 6.453 6 N -0.342 5.342 7 C 0.009 3.991 8 H 0.107 0.893 9 C -0.162 4.162 10 C -0.081 4.081 11 H 0.133 0.867 12 C -0.081 4.081 13 C -0.109 4.109 14 C -0.178 4.178 15 C 0.046 3.954 16 F -0.135 7.135 17 C -0.178 4.178 18 C -0.106 4.106 19 C -0.181 4.181 20 C -0.156 4.156 21 C -0.085 4.085 22 C -0.143 4.143 23 O -0.371 6.371 24 Si 0.709 3.291 25 O -0.093 6.093 26 H 0.118 0.882 27 H 0.110 0.890 28 H 0.121 0.879 29 H 0.251 0.749 30 H 0.122 0.878 31 H 0.106 0.894 32 H 0.167 0.833 33 H 0.160 0.840 34 H 0.162 0.838 35 H 0.173 0.827 36 H 0.085 0.915 37 H 0.119 0.881 38 H 0.206 0.794 39 H 0.149 0.851 40 H 0.268 0.732 41 H -0.239 1.239 42 H -0.224 1.224 Dipole moment (debyes) X Y Z Total from point charges 4.540 -4.451 -0.241 6.363 hybrid contribution 0.165 1.047 -0.197 1.078 sum 4.705 -3.404 -0.437 5.824 Atomic orbital electron populations 1.20715 0.82606 1.05449 1.05266 1.23319 0.94903 0.83096 0.96565 1.21263 0.94202 0.93567 1.17737 1.17241 0.85275 0.84122 0.75125 1.90757 1.17960 1.84399 1.52157 1.45322 1.09901 1.04851 1.74163 1.21904 0.99565 0.79693 0.97956 0.89345 1.23389 0.97289 0.99505 0.96049 1.21638 0.97144 0.92890 0.96414 0.86681 1.19945 0.93465 0.95671 0.99062 1.21123 1.00818 0.90927 0.98005 1.21362 0.94633 0.99401 1.02443 1.18125 0.94909 0.79609 1.02805 1.91471 1.92247 1.39544 1.90198 1.21398 1.00314 0.92891 1.03201 1.21223 0.96370 0.96098 0.96874 1.23622 0.96640 1.00762 0.97083 1.22860 0.96578 0.93143 1.03036 1.21856 0.82222 0.95593 1.08843 1.23907 0.91460 1.06894 0.92018 1.86412 1.47109 1.67277 1.36297 0.94397 0.83010 0.75935 0.75754 1.83705 1.17542 1.35907 1.72115 0.88171 0.89030 0.87898 0.74855 0.87752 0.89354 0.83304 0.84024 0.83821 0.82728 0.91462 0.88120 0.79358 0.85123 0.73223 1.23885 1.22359 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.34 9.89 71.24 0.70 0.37 16 2 C 0.07 0.58 7.37 25.26 0.19 0.76 16 3 C -0.26 -1.63 6.31 -18.99 -0.12 -1.75 16 4 C 0.59 3.95 7.81 86.65 0.68 4.63 16 5 O -0.57 -7.43 14.46 -4.07 -0.06 -7.48 16 6 N -0.69 0.48 5.26 -443.36 -2.33 -1.85 16 7 C 0.11 -0.21 4.30 45.52 0.20 -0.01 16 8 H 0.09 0.21 7.50 -2.39 -0.02 0.19 16 9 C -0.12 0.77 7.29 31.12 0.23 1.00 16 10 C -0.06 0.39 3.87 -10.92 -0.04 0.35 16 11 H 0.12 -1.04 8.09 -2.39 -0.02 -1.06 16 12 C -0.08 0.25 5.29 -19.86 -0.11 0.15 16 13 C -0.09 0.18 8.62 22.26 0.19 0.37 16 14 C -0.16 -0.22 10.03 22.31 0.22 0.01 16 15 C 0.06 0.28 7.30 22.38 0.16 0.44 16 16 F -0.16 -1.25 17.27 44.97 0.78 -0.47 16 17 C -0.16 -0.12 10.03 22.32 0.22 0.10 16 18 C -0.09 0.24 9.71 22.26 0.22 0.46 16 19 C -0.14 0.49 7.27 31.21 0.23 0.71 16 20 C -0.14 -0.24 10.48 23.65 0.25 0.00 16 21 C -0.04 -0.15 6.22 24.76 0.15 0.00 16 22 C -0.03 0.13 2.96 71.23 0.21 0.34 16 23 O -0.56 2.54 12.86 -148.98 -1.92 0.63 16 24 Si 0.80 -2.18 32.09 68.60 2.20 0.03 16 25 O -0.19 -1.67 8.90 4.38 0.04 -1.63 16 26 H 0.10 0.19 8.14 -2.39 -0.02 0.17 16 27 H 0.09 0.10 8.14 -2.38 -0.02 0.08 16 28 H 0.10 0.63 6.48 -2.39 -0.02 0.62 16 29 H 0.41 -2.53 7.88 -92.71 -0.73 -3.26 16 30 H 0.10 -0.68 7.73 -2.39 -0.02 -0.70 16 31 H 0.09 -0.66 8.14 -2.38 -0.02 -0.68 16 32 H 0.15 -0.84 6.64 -2.91 -0.02 -0.86 16 33 H 0.14 -0.12 8.06 -2.91 -0.02 -0.15 16 34 H 0.14 -0.26 8.06 -2.91 -0.02 -0.28 16 35 H 0.16 -1.21 8.05 -2.91 -0.02 -1.23 16 36 H 0.07 -0.07 8.14 -2.39 -0.02 -0.09 16 37 H 0.10 -0.42 6.30 -2.39 -0.02 -0.44 16 38 H 0.19 -1.01 7.74 -2.91 -0.02 -1.03 16 39 H 0.13 -1.40 7.96 -2.38 -0.02 -1.42 16 40 H 0.41 -6.59 8.74 -74.05 -0.65 -7.24 16 41 H -0.31 -2.30 7.11 99.48 0.71 -1.59 16 42 H -0.30 -1.27 7.11 99.48 0.71 -0.56 16 Total: 0.00 -24.45 361.60 2.03 -22.41 By element: Atomic # 1 Polarization: -19.29 SS G_CDS: -0.26 Total: -19.54 kcal Atomic # 6 Polarization: 4.34 SS G_CDS: 3.58 Total: 7.92 kcal Atomic # 7 Polarization: 0.48 SS G_CDS: -2.33 Total: -1.85 kcal Atomic # 8 Polarization: -6.55 SS G_CDS: -1.94 Total: -8.49 kcal Atomic # 9 Polarization: -1.25 SS G_CDS: 0.78 Total: -0.47 kcal Atomic # 14 Polarization: -2.18 SS G_CDS: 2.20 Total: 0.03 kcal Total: -24.45 2.03 -22.41 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10466350_13308374.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -17.899 kcal (2) G-P(sol) polarization free energy of solvation -24.446 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -42.345 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.033 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.412 kcal (6) G-S(sol) free energy of system = (1) + (5) -40.311 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.00 seconds