Wall clock time and date at job start Sat Mar 6 2021 16:09:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42892 * 1 3 3 Si 1.86298 * 109.47605 * 2 1 4 4 C 1.50699 * 109.47249 * 239.99737 * 2 1 3 5 5 C 1.38053 * 119.80778 * 299.72925 * 4 2 1 6 6 C 1.38715 * 120.08405 * 179.72620 * 5 4 2 7 7 O 1.35654 * 120.14513 * 180.25606 * 6 5 4 8 8 C 1.40136 * 119.69985 * 0.54234 * 6 5 4 9 9 C 1.47534 * 120.19003 * 179.75204 * 8 6 5 10 10 O 1.21593 * 120.00039 * 359.97438 * 9 8 6 11 11 N 1.34781 * 120.00099 * 179.97438 * 9 8 6 12 12 C 1.46495 * 120.00165 * 180.02562 * 11 9 8 13 13 H 1.09003 * 112.84784 * 23.80250 * 12 11 9 14 14 C 1.53772 * 113.61671 * 154.99915 * 12 11 9 15 15 C 1.53782 * 87.08127 * 89.11412 * 14 12 11 16 16 H 1.08998 * 113.61355 * 270.88307 * 15 14 12 17 17 C 1.50706 * 113.61310 * 139.98615 * 15 14 12 18 18 C 1.38248 * 119.96968 * 299.72481 * 17 15 14 19 19 C 1.38192 * 120.02240 * 179.73292 * 18 17 15 20 20 C 1.38469 * 119.97327 * 0.56540 * 19 18 17 21 21 F 1.35099 * 120.02222 * 179.69001 * 20 19 18 22 22 C 1.38455 * 119.94773 * 359.70703 * 20 19 18 23 23 C 1.38198 * 119.97459 * 359.97438 * 22 20 19 24 24 C 1.53773 * 87.08194 * 25.43535 * 15 14 12 25 25 C 1.39704 * 119.61816 * 359.73242 * 8 6 5 26 26 C 1.37793 * 119.90699 * 359.97438 * 25 8 6 27 27 H 0.96703 * 114.00176 * 60.00012 * 1 2 3 28 28 H 1.09004 * 109.47449 * 120.00278 * 2 1 3 29 29 H 1.48506 * 109.99834 * 298.68369 * 3 2 1 30 30 H 1.48502 * 110.00011 * 59.99633 * 3 2 1 31 31 H 1.08000 * 119.95357 * 359.97438 * 5 4 2 32 32 H 0.96700 * 113.99918 * 270.28484 * 7 6 5 33 33 H 0.96998 * 119.99635 * 359.97438 * 11 9 8 34 34 H 1.08999 * 113.62093 * 203.66289 * 14 12 11 35 35 H 1.09007 * 113.61731 * 334.56785 * 14 12 11 36 36 H 1.07994 * 119.98490 * 359.97438 * 18 17 15 37 37 H 1.08000 * 120.01458 * 180.25503 * 19 18 17 38 38 H 1.08004 * 120.01170 * 179.97438 * 22 20 19 39 39 H 1.07996 * 119.98710 * 179.97438 * 23 22 20 40 40 H 1.09002 * 113.61734 * 220.02024 * 24 15 14 41 41 H 1.08996 * 113.61554 * 89.11408 * 24 15 14 42 42 H 1.08002 * 120.04845 * 179.97438 * 25 8 6 43 43 H 1.08000 * 119.84578 * 180.02562 * 26 25 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2304 5 6 1.6000 -2.0338 -1.4420 6 6 2.0546 -2.6917 -2.5755 7 8 1.7255 -3.9906 -2.7873 8 6 2.8602 -2.0103 -3.4977 9 6 3.3542 -2.7011 -4.7040 10 8 3.0628 -3.8652 -4.9002 11 7 4.1284 -2.0419 -5.5887 12 6 4.6184 -2.7276 -6.7869 13 1 3.9968 -3.5761 -7.0730 14 6 4.9385 -1.7776 -7.9529 15 6 6.3575 -1.6677 -7.3706 16 1 6.4683 -0.8676 -6.6387 17 6 7.4409 -1.6585 -8.4181 18 6 7.5850 -2.7362 -9.2721 19 6 8.5745 -2.7266 -10.2366 20 6 9.4293 -1.6421 -10.3400 21 9 10.4010 -1.6345 -11.2785 22 6 9.2876 -0.5659 -9.4805 23 6 8.2931 -0.5749 -8.5210 24 6 6.1213 -3.0504 -6.7407 25 6 3.1926 -0.6729 -3.2682 26 6 2.7273 -0.0331 -2.1400 27 1 -0.3934 0.4417 -0.7651 28 1 1.7923 -0.5139 0.8900 29 1 1.5879 2.4585 -1.2243 30 1 1.5615 2.4679 1.2085 31 1 0.9828 -2.5563 -0.7262 32 1 2.3514 -4.6220 -2.4069 33 1 4.3604 -1.1131 -5.4324 34 1 4.9037 -2.2587 -8.9304 35 1 4.3794 -0.8424 -7.9203 36 1 6.9215 -3.5841 -9.1878 37 1 8.6843 -3.5667 -10.9063 38 1 9.9540 0.2803 -9.5600 39 1 8.1826 0.2642 -7.8502 40 1 6.5171 -3.1429 -5.7293 41 1 6.4098 -3.8796 -7.3866 42 1 3.8134 -0.1411 -3.9741 43 1 2.9845 1.0009 -1.9638 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10466350_13422076.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:09:00 Heat of formation + Delta-G solvation = -67.902438 kcal Electronic energy + Delta-G solvation = -28459.373156 eV Core-core repulsion = 24158.733144 eV Total energy + Delta-G solvation = -4300.640012 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.126 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -49.80597 -41.91661 -41.16918 -39.88601 -38.79707 -38.25457 -37.26278 -34.65317 -32.81080 -32.20164 -31.25746 -31.16719 -27.72729 -26.87400 -26.03419 -24.24280 -23.99692 -23.63175 -22.62460 -21.77690 -20.35405 -19.44920 -18.91544 -18.63772 -18.33119 -17.51982 -17.30015 -17.01950 -16.61536 -16.51240 -16.38302 -16.26873 -16.13701 -15.83349 -15.51573 -15.37654 -15.09404 -14.87100 -14.58420 -14.38225 -14.23251 -13.98592 -13.80540 -13.74660 -13.57763 -13.36679 -12.97943 -12.91900 -12.45277 -12.32330 -12.14299 -11.96152 -11.79464 -11.68668 -11.36072 -10.92368 -10.70547 -10.23660 -10.14738 -10.07910 -9.84809 -9.51938 -5.09154 -0.46467 0.05036 0.08663 0.19522 1.12094 1.47293 1.70715 1.85447 1.95834 2.48411 2.52024 3.05423 3.22427 3.26845 3.30368 3.38056 3.50520 3.53728 3.58142 3.66188 3.71448 3.81528 3.88586 3.92813 4.01784 4.15120 4.19727 4.31983 4.33211 4.48812 4.51892 4.58484 4.63129 4.71208 4.77314 4.85608 4.89417 4.90926 4.95445 5.00360 5.08114 5.12144 5.14202 5.20866 5.42196 5.47603 5.53941 5.86061 6.25718 6.38301 6.66931 7.16527 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.526 6.526 2 C -0.081 4.081 3 Si 0.688 3.312 4 C -0.074 4.074 5 C -0.129 4.129 6 C 0.174 3.826 7 O -0.476 6.476 8 C -0.165 4.165 9 C 0.562 3.438 10 O -0.515 6.515 11 N -0.712 5.712 12 C 0.120 3.880 13 H 0.107 0.893 14 C -0.136 4.136 15 C -0.073 4.073 16 H 0.099 0.901 17 C -0.082 4.082 18 C -0.088 4.088 19 C -0.150 4.150 20 C 0.094 3.906 21 F -0.140 7.140 22 C -0.151 4.151 23 C -0.087 4.087 24 C -0.144 4.144 25 C -0.065 4.065 26 C -0.135 4.135 27 H 0.378 0.622 28 H 0.123 0.877 29 H -0.258 1.258 30 H -0.255 1.255 31 H 0.141 0.859 32 H 0.398 0.602 33 H 0.399 0.601 34 H 0.100 0.900 35 H 0.078 0.922 36 H 0.134 0.866 37 H 0.136 0.864 38 H 0.136 0.864 39 H 0.132 0.868 40 H 0.076 0.924 41 H 0.096 0.904 42 H 0.134 0.866 43 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.049 3.735 1.766 5.135 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.333 6.333 2 C -0.190 4.190 3 Si 0.589 3.411 4 C -0.075 4.075 5 C -0.148 4.148 6 C 0.127 3.873 7 O -0.287 6.287 8 C -0.168 4.168 9 C 0.349 3.651 10 O -0.390 6.390 11 N -0.364 5.364 12 C 0.015 3.985 13 H 0.125 0.875 14 C -0.174 4.174 15 C -0.091 4.091 16 H 0.117 0.883 17 C -0.083 4.083 18 C -0.106 4.106 19 C -0.169 4.169 20 C 0.075 3.925 21 F -0.118 7.118 22 C -0.170 4.170 23 C -0.105 4.105 24 C -0.183 4.183 25 C -0.084 4.084 26 C -0.153 4.153 27 H 0.226 0.774 28 H 0.141 0.859 29 H -0.183 1.183 30 H -0.180 1.180 31 H 0.159 0.841 32 H 0.257 0.743 33 H 0.235 0.765 34 H 0.118 0.882 35 H 0.096 0.904 36 H 0.152 0.848 37 H 0.154 0.846 38 H 0.154 0.846 39 H 0.150 0.850 40 H 0.095 0.905 41 H 0.115 0.885 42 H 0.151 0.849 43 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges 2.264 3.620 1.840 4.649 hybrid contribution -0.258 0.135 -0.499 0.578 sum 2.006 3.755 1.340 4.463 Atomic orbital electron populations 1.86628 1.17276 1.79972 1.49387 1.25160 0.84333 1.11324 0.98232 0.95021 0.91497 0.74014 0.80561 1.20406 0.96532 0.94132 0.96417 1.21362 1.01419 0.94795 0.97191 1.18511 0.91710 0.85956 0.91122 1.84767 1.51667 1.12386 1.79924 1.20400 1.03004 0.95634 0.97796 1.18040 0.78018 0.86405 0.82622 1.90843 1.56586 1.16002 1.75592 1.45578 1.52421 1.15463 1.22962 1.21848 0.95307 0.96593 0.84760 0.87469 1.23448 0.95063 1.00455 0.98460 1.21594 0.92590 0.99015 0.95887 0.88259 1.19747 0.96963 0.94346 0.97211 1.20895 0.97333 0.98342 0.94004 1.21193 0.96445 0.98392 1.00871 1.17783 0.88788 0.96319 0.89602 1.91522 1.60623 1.96759 1.62929 1.21194 1.00712 0.98494 0.96613 1.20928 0.93887 0.98146 0.97505 1.23584 0.95839 0.96721 1.02113 1.21135 0.97669 0.92669 0.96888 1.20948 0.99512 1.00189 0.94645 0.77421 0.85884 1.18277 1.18005 0.84131 0.74301 0.76512 0.88196 0.90360 0.84830 0.84601 0.84643 0.85011 0.90528 0.88533 0.84866 0.84630 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.11 12.77 -35.23 -0.45 -0.56 16 2 C -0.08 0.14 2.81 36.01 0.10 0.24 16 3 Si 0.69 -1.78 29.77 -169.99 -5.06 -6.84 16 4 C -0.07 0.10 5.39 -104.57 -0.56 -0.46 16 5 C -0.13 -0.01 9.53 -39.47 -0.38 -0.38 16 6 C 0.17 0.22 6.72 -38.69 -0.26 -0.04 16 7 O -0.48 -1.10 11.58 -40.54 -0.47 -1.57 16 8 C -0.16 -0.06 5.89 -104.85 -0.62 -0.67 16 9 C 0.56 0.90 7.76 -12.47 -0.10 0.80 16 10 O -0.51 -2.77 14.76 -16.59 -0.24 -3.02 16 11 N -0.71 1.14 5.21 -54.06 -0.28 0.86 16 12 C 0.12 -0.19 4.32 -67.12 -0.29 -0.48 16 13 H 0.11 0.04 7.46 -51.93 -0.39 -0.35 16 14 C -0.14 0.42 7.29 -25.92 -0.19 0.23 16 15 C -0.07 0.23 3.86 -90.96 -0.35 -0.12 16 16 H 0.10 -0.43 8.09 -51.93 -0.42 -0.85 16 17 C -0.08 0.13 5.29 -104.62 -0.55 -0.42 16 18 C -0.09 0.10 8.62 -39.59 -0.34 -0.24 16 19 C -0.15 -0.01 10.03 -39.51 -0.40 -0.41 16 20 C 0.09 0.13 7.30 -39.42 -0.29 -0.16 16 21 F -0.14 -0.41 17.27 2.25 0.04 -0.38 16 22 C -0.15 0.00 10.03 -39.52 -0.40 -0.39 16 23 C -0.09 0.12 9.71 -39.60 -0.38 -0.27 16 24 C -0.14 0.33 7.25 -25.92 -0.19 0.14 16 25 C -0.06 0.16 9.54 -39.20 -0.37 -0.22 16 26 C -0.14 0.35 8.64 -39.63 -0.34 0.01 16 27 H 0.38 -0.95 8.70 45.56 0.40 -0.56 16 28 H 0.12 -0.31 7.96 -51.93 -0.41 -0.72 16 29 H -0.26 0.20 7.11 56.52 0.40 0.60 16 30 H -0.26 -0.28 7.11 56.52 0.40 0.13 16 31 H 0.14 -0.01 8.06 -52.49 -0.42 -0.44 16 32 H 0.40 -0.58 9.06 45.56 0.41 -0.17 16 33 H 0.40 -1.73 6.73 -40.82 -0.27 -2.00 16 34 H 0.10 -0.31 7.73 -51.93 -0.40 -0.71 16 35 H 0.08 -0.27 8.14 -51.92 -0.42 -0.70 16 36 H 0.13 -0.38 6.64 -52.49 -0.35 -0.73 16 37 H 0.14 -0.16 8.06 -52.49 -0.42 -0.58 16 38 H 0.14 -0.18 8.06 -52.48 -0.42 -0.60 16 39 H 0.13 -0.45 8.05 -52.49 -0.42 -0.88 16 40 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 41 H 0.10 -0.25 6.29 -51.93 -0.33 -0.57 16 42 H 0.13 -0.74 6.40 -52.49 -0.34 -1.07 16 43 H 0.14 -0.63 4.85 -52.49 -0.25 -0.88 16 LS Contribution 363.98 15.07 5.49 5.49 Total: 0.00 -9.51 363.98 -10.98 -20.49 By element: Atomic # 1 Polarization: -7.54 SS G_CDS: -4.09 Total: -11.63 kcal Atomic # 6 Polarization: 3.06 SS G_CDS: -5.91 Total: -2.84 kcal Atomic # 7 Polarization: 1.14 SS G_CDS: -0.28 Total: 0.86 kcal Atomic # 8 Polarization: -3.98 SS G_CDS: -1.16 Total: -5.15 kcal Atomic # 9 Polarization: -0.41 SS G_CDS: 0.04 Total: -0.38 kcal Atomic # 14 Polarization: -1.78 SS G_CDS: -5.06 Total: -6.84 kcal Total LS contribution 5.49 Total: 5.49 kcal Total: -9.51 -10.98 -20.49 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10466350_13422076.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -47.416 kcal (2) G-P(sol) polarization free energy of solvation -9.511 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -56.926 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.976 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.487 kcal (6) G-S(sol) free energy of system = (1) + (5) -67.902 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.94 seconds