Wall clock time and date at job start Sat Mar 6 2021 16:09:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42893 * 1 3 3 Si 1.86293 * 109.47399 * 2 1 4 4 C 1.50700 * 109.46748 * 119.99918 * 2 1 3 5 5 C 1.30892 * 118.38022 * 250.15894 * 4 2 1 6 6 N 1.38922 * 121.78156 * 180.56530 * 5 4 2 7 7 C 1.47030 * 118.88616 * 346.51598 * 6 5 4 8 8 C 1.50701 * 109.82149 * 163.20514 * 7 6 5 9 9 O 1.21274 * 120.00136 * 341.79734 * 8 7 6 10 10 N 1.34787 * 119.99858 * 161.79430 * 8 7 6 11 11 C 1.46497 * 119.99715 * 179.97438 * 10 8 7 12 12 H 1.08997 * 112.85375 * 336.19892 * 11 10 8 13 13 C 1.53782 * 113.60934 * 107.50587 * 11 10 8 14 14 C 1.53780 * 87.08051 * 89.11802 * 13 11 10 15 15 H 1.09007 * 113.68580 * 270.86532 * 14 13 11 16 16 C 1.50696 * 113.61626 * 139.98533 * 14 13 11 17 17 C 1.38244 * 119.97291 * 322.21990 * 16 14 13 18 18 C 1.38194 * 120.02785 * 179.72900 * 17 16 14 19 19 C 1.38464 * 119.97212 * 0.57140 * 18 17 16 20 20 F 1.35100 * 120.02542 * 179.68139 * 19 18 17 21 21 C 1.38453 * 119.94830 * 359.70609 * 19 18 17 22 22 C 1.38200 * 119.97759 * 359.97438 * 21 19 18 23 23 C 1.53773 * 87.08402 * 25.42965 * 14 13 11 24 24 C 1.53547 * 107.65578 * 43.66623 * 7 6 5 25 25 C 1.50208 * 118.54754 * 70.00295 * 4 2 1 26 26 H 0.96697 * 114.00265 * 300.00675 * 1 2 3 27 27 H 1.09000 * 109.47041 * 239.99595 * 2 1 3 28 28 H 1.48502 * 110.00179 * 299.99873 * 3 2 1 29 29 H 1.48503 * 110.00230 * 61.31585 * 3 2 1 30 30 H 1.07995 * 119.14217 * 0.39981 * 5 4 2 31 31 H 0.97003 * 120.55912 * 166.49730 * 6 5 4 32 32 H 1.08995 * 109.82333 * 284.12832 * 7 6 5 33 33 H 0.96995 * 119.99484 * 0.02562 * 10 8 7 34 34 H 1.09003 * 113.61263 * 203.66412 * 13 11 10 35 35 H 1.08998 * 113.61849 * 334.56350 * 13 11 10 36 36 H 1.08003 * 119.98577 * 359.97438 * 17 16 14 37 37 H 1.08005 * 120.01761 * 180.30050 * 18 17 16 38 38 H 1.08000 * 120.01441 * 180.02562 * 21 19 18 39 39 H 1.07997 * 119.98905 * 180.02562 * 22 21 19 40 40 H 1.09000 * 113.61275 * 220.02375 * 23 14 13 41 41 H 1.08996 * 113.68757 * 89.13031 * 23 14 13 42 42 H 1.09003 * 109.62130 * 179.32609 * 24 7 6 43 43 H 1.09003 * 109.77433 * 58.86526 * 24 7 6 44 44 H 1.09002 * 109.33122 * 39.66150 * 25 4 2 45 45 H 1.08996 * 109.32461 * 280.01273 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9312 -0.7104 1.2305 5 6 2.5070 -0.0004 2.1673 6 7 3.0059 -0.5839 3.3252 7 6 2.6258 -1.9681 3.6436 8 6 3.5685 -2.5325 4.6751 9 8 4.6433 -2.0048 4.8674 10 7 3.2169 -3.6237 5.3839 11 6 4.1335 -4.1726 6.3862 12 1 5.1741 -3.9085 6.1979 13 6 3.6844 -3.9205 7.8352 14 6 2.9084 -5.2449 7.7420 15 1 1.8912 -5.1309 7.3672 16 6 2.9799 -6.0760 8.9970 17 6 4.1546 -6.1297 9.7238 18 6 4.2197 -6.8871 10.8779 19 6 3.1113 -7.6018 11.2997 20 9 3.1757 -8.3477 12.4243 21 6 1.9371 -7.5518 10.5679 22 6 1.8723 -6.7885 9.4176 23 6 3.9184 -5.6699 6.6632 24 6 2.7207 -2.7869 2.3481 25 6 1.7450 -2.1978 1.3269 26 1 -0.3933 0.4418 0.7650 27 1 1.7923 -0.5139 -0.8900 28 1 1.5616 2.4678 -1.2085 29 1 1.5879 2.4586 1.2242 30 1 2.5995 1.0675 2.0359 31 1 3.5954 -0.0866 3.9135 32 1 1.6041 -1.9929 4.0226 33 1 2.3574 -4.0458 5.2297 34 1 4.5019 -3.9432 8.5559 35 1 3.0437 -3.0459 7.9479 36 1 5.0206 -5.5764 9.3918 37 1 5.1361 -6.9251 11.4483 38 1 1.0718 -8.1085 10.8961 39 1 0.9564 -6.7490 8.8468 40 1 3.4666 -6.2076 5.8296 41 1 4.8002 -6.1712 7.0621 42 1 2.4561 -3.8247 2.5508 43 1 3.7360 -2.7382 1.9546 44 1 1.9281 -2.6483 0.3514 45 1 0.7230 -2.4139 1.6380 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10466350_15413834.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:09:25 Heat of formation + Delta-G solvation = -34.916622 kcal Electronic energy + Delta-G solvation = -27568.045622 eV Core-core repulsion = 23467.469307 eV Total energy + Delta-G solvation = -4100.576316 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 333.153 amu Computer time = 1.06 seconds Orbital eigenvalues (eV) -49.92169 -41.75817 -40.79620 -39.58686 -38.59870 -37.41869 -34.68845 -33.19491 -32.90191 -32.12206 -31.26359 -27.68308 -26.67544 -25.93927 -25.31903 -24.11803 -23.67546 -22.62623 -21.89492 -20.23021 -19.41932 -19.03228 -18.72883 -18.11144 -17.44398 -17.24794 -16.77445 -16.74510 -16.62637 -16.28712 -16.06882 -15.77654 -15.43267 -15.25243 -15.17927 -14.90616 -14.47904 -14.40956 -14.28141 -14.01060 -13.97154 -13.88021 -13.64673 -13.39802 -12.99313 -12.93433 -12.87307 -12.37724 -12.19100 -11.93672 -11.85085 -11.65616 -11.63812 -11.24359 -11.21068 -10.88238 -10.28888 -10.13156 -10.05696 -9.48019 -8.45201 -4.88526 0.12221 0.26964 1.35007 1.41749 1.47627 1.57033 1.88581 1.99392 2.55912 2.65581 3.30263 3.47860 3.53404 3.60187 3.67207 3.72522 3.81633 3.83278 3.89999 3.95977 3.98566 4.07301 4.22210 4.32549 4.33152 4.42479 4.49015 4.64147 4.66191 4.74345 4.79589 4.79998 4.87648 4.90671 5.03141 5.04901 5.06094 5.06359 5.15738 5.19595 5.27279 5.28759 5.32088 5.50151 5.59983 5.66361 5.92654 6.26352 6.47709 6.65941 6.83897 7.13183 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.556 6.556 2 C -0.055 4.055 3 Si 0.742 3.258 4 C -0.281 4.281 5 C 0.137 3.863 6 N -0.738 5.738 7 C 0.138 3.862 8 C 0.517 3.483 9 O -0.571 6.571 10 N -0.694 5.694 11 C 0.116 3.884 12 H 0.086 0.914 13 C -0.144 4.144 14 C -0.064 4.064 15 H 0.118 0.882 16 C -0.081 4.081 17 C -0.091 4.091 18 C -0.160 4.160 19 C 0.063 3.937 20 F -0.157 7.157 21 C -0.160 4.160 22 C -0.088 4.088 23 C -0.125 4.125 24 C -0.121 4.121 25 C -0.051 4.051 26 H 0.382 0.618 27 H 0.111 0.889 28 H -0.312 1.312 29 H -0.284 1.284 30 H 0.140 0.860 31 H 0.407 0.593 32 H 0.109 0.891 33 H 0.418 0.582 34 H 0.096 0.904 35 H 0.069 0.931 36 H 0.149 0.851 37 H 0.141 0.859 38 H 0.143 0.857 39 H 0.156 0.844 40 H 0.091 0.909 41 H 0.100 0.900 42 H 0.100 0.900 43 H 0.062 0.938 44 H 0.073 0.927 45 H 0.069 0.931 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.074 -1.975 -0.398 2.282 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.364 6.364 2 C -0.166 4.166 3 Si 0.650 3.350 4 C -0.291 4.291 5 C 0.016 3.984 6 N -0.370 5.370 7 C 0.029 3.971 8 C 0.303 3.697 9 O -0.450 6.450 10 N -0.346 5.346 11 C 0.010 3.990 12 H 0.104 0.896 13 C -0.182 4.182 14 C -0.082 4.082 15 H 0.136 0.864 16 C -0.082 4.082 17 C -0.109 4.109 18 C -0.179 4.179 19 C 0.044 3.956 20 F -0.135 7.135 21 C -0.179 4.179 22 C -0.106 4.106 23 C -0.163 4.163 24 C -0.159 4.159 25 C -0.089 4.089 26 H 0.231 0.769 27 H 0.129 0.871 28 H -0.241 1.241 29 H -0.211 1.211 30 H 0.157 0.843 31 H 0.243 0.757 32 H 0.126 0.874 33 H 0.256 0.744 34 H 0.114 0.886 35 H 0.088 0.912 36 H 0.167 0.833 37 H 0.159 0.841 38 H 0.161 0.839 39 H 0.173 0.827 40 H 0.109 0.891 41 H 0.118 0.882 42 H 0.118 0.882 43 H 0.080 0.920 44 H 0.092 0.908 45 H 0.088 0.912 Dipole moment (debyes) X Y Z Total from point charges -0.470 -1.250 -0.734 1.524 hybrid contribution -1.127 -0.173 1.173 1.636 sum -1.597 -1.423 0.440 2.184 Atomic orbital electron populations 1.86543 1.19616 1.80163 1.50083 1.24843 0.82697 1.09749 0.99288 0.94439 0.91050 0.73790 0.75707 1.20865 1.13900 0.96654 0.97727 1.20543 0.94900 0.96846 0.86072 1.44391 1.54746 1.12682 1.25193 1.21096 0.97595 0.83948 0.94431 1.20837 0.87093 0.80492 0.81301 1.90726 1.25061 1.60746 1.68423 1.45497 1.21682 1.29170 1.38215 1.21846 0.94270 0.95054 0.87838 0.89603 1.23569 1.00682 0.97389 0.96567 1.21615 1.00596 0.93967 0.91986 0.86396 1.19983 0.93313 0.97862 0.96993 1.21120 0.98861 0.97582 0.93316 1.21365 0.98287 0.99047 0.99220 1.18136 0.96752 0.95565 0.85099 1.91471 1.97104 1.74964 1.49997 1.21401 0.97204 1.02382 0.96925 1.21235 0.99539 0.94799 0.94991 1.23386 0.99981 0.94347 0.98624 1.21840 1.00824 0.99690 0.93588 1.19951 0.98669 0.91175 0.99074 0.76942 0.87079 1.24075 1.21105 0.84288 0.75657 0.87360 0.74389 0.88551 0.91238 0.83318 0.84118 0.83949 0.82666 0.89051 0.88203 0.88158 0.91950 0.90848 0.91213 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -1.62 12.88 -148.98 -1.92 -3.54 16 2 C -0.06 0.01 2.81 71.24 0.20 0.21 16 3 Si 0.74 -0.52 29.96 68.60 2.06 1.54 16 4 C -0.28 0.38 5.36 -16.53 -0.09 0.29 16 5 C 0.14 -0.23 9.60 83.64 0.80 0.57 16 6 N -0.74 0.94 5.47 -329.17 -1.80 -0.86 16 7 C 0.14 -0.59 3.36 44.33 0.15 -0.44 16 8 C 0.52 -0.68 7.10 87.66 0.62 -0.06 16 9 O -0.57 -4.33 15.66 -3.01 -0.05 -4.38 16 10 N -0.69 5.04 5.26 -440.03 -2.32 2.72 16 11 C 0.12 -0.67 4.32 45.52 0.20 -0.47 16 12 H 0.09 -0.07 7.46 -2.39 -0.02 -0.09 16 13 C -0.14 0.92 7.25 31.12 0.23 1.15 16 14 C -0.06 0.57 3.86 -11.02 -0.04 0.52 16 15 H 0.12 -1.43 8.09 -2.38 -0.02 -1.45 16 16 C -0.08 0.39 5.29 -19.86 -0.11 0.28 16 17 C -0.09 0.29 8.59 22.26 0.19 0.48 16 18 C -0.16 -0.08 10.03 22.31 0.22 0.14 16 19 C 0.06 0.23 7.30 22.37 0.16 0.39 16 20 F -0.16 -1.18 17.27 44.97 0.78 -0.40 16 21 C -0.16 0.00 10.03 22.31 0.22 0.23 16 22 C -0.09 0.35 9.71 22.26 0.22 0.57 16 23 C -0.13 1.16 7.29 31.12 0.23 1.38 16 24 C -0.12 0.59 5.47 30.79 0.17 0.76 16 25 C -0.05 0.16 5.86 29.70 0.17 0.33 16 26 H 0.38 -1.07 8.70 -74.06 -0.64 -1.71 16 27 H 0.11 -0.07 7.96 -2.39 -0.02 -0.09 16 28 H -0.31 -2.48 7.11 99.48 0.71 -1.78 16 29 H -0.28 -0.66 6.82 99.48 0.68 0.01 16 30 H 0.14 -0.49 4.28 -2.91 -0.01 -0.50 16 31 H 0.41 -0.09 8.08 -92.71 -0.75 -0.84 16 32 H 0.11 -0.85 8.14 -2.39 -0.02 -0.87 16 33 H 0.42 -5.57 8.70 -92.71 -0.81 -6.38 16 34 H 0.10 -0.61 6.32 -2.39 -0.02 -0.62 16 35 H 0.07 -0.32 8.14 -2.39 -0.02 -0.34 16 36 H 0.15 -1.03 6.67 -2.91 -0.02 -1.05 16 37 H 0.14 -0.22 8.06 -2.91 -0.02 -0.24 16 38 H 0.14 -0.34 8.06 -2.91 -0.02 -0.36 16 39 H 0.16 -1.43 8.05 -2.91 -0.02 -1.45 16 40 H 0.09 -1.01 8.14 -2.39 -0.02 -1.03 16 41 H 0.10 -0.86 7.72 -2.39 -0.02 -0.88 16 42 H 0.10 -0.94 8.14 -2.39 -0.02 -0.96 16 43 H 0.06 -0.06 8.14 -2.39 -0.02 -0.08 16 44 H 0.07 -0.18 8.14 -2.39 -0.02 -0.20 16 45 H 0.07 -0.24 8.14 -2.39 -0.02 -0.26 16 Total: 0.00 -18.90 368.80 -0.84 -19.75 By element: Atomic # 1 Polarization: -20.04 SS G_CDS: -1.14 Total: -21.18 kcal Atomic # 6 Polarization: 2.80 SS G_CDS: 3.55 Total: 6.35 kcal Atomic # 7 Polarization: 5.98 SS G_CDS: -4.12 Total: 1.86 kcal Atomic # 8 Polarization: -5.95 SS G_CDS: -1.97 Total: -7.92 kcal Atomic # 9 Polarization: -1.18 SS G_CDS: 0.78 Total: -0.40 kcal Atomic # 14 Polarization: -0.52 SS G_CDS: 2.06 Total: 1.54 kcal Total: -18.90 -0.84 -19.75 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10466350_15413834.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -15.167 kcal (2) G-P(sol) polarization free energy of solvation -18.905 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -34.072 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.845 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.749 kcal (6) G-S(sol) free energy of system = (1) + (5) -34.917 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds