Wall clock time and date at job start Sat Mar 6 2021 16:10:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86296 * 109.47183 * 2 1 4 4 C 1.50698 * 109.47171 * 120.00312 * 2 1 3 5 5 C 1.38249 * 119.97135 * 245.00109 * 4 2 1 6 6 C 1.38282 * 120.11067 * 179.97438 * 5 4 2 7 7 C 1.38120 * 120.05683 * 0.03718 * 6 5 4 8 8 C 1.38753 * 119.94798 * 359.97438 * 7 6 5 9 9 O 1.35892 * 120.06161 * 179.97438 * 8 7 6 10 10 C 1.42905 * 116.99729 * 0.02562 * 9 8 7 11 11 C 1.50705 * 109.46842 * 179.97438 * 10 9 8 12 12 O 1.21278 * 120.00250 * 359.97438 * 11 10 9 13 13 N 1.34783 * 119.99542 * 179.97438 * 11 10 9 14 14 C 1.46502 * 119.99683 * 179.97438 * 13 11 10 15 15 H 1.09007 * 112.90475 * 23.75266 * 14 13 11 16 16 C 1.53779 * 113.61301 * 154.99921 * 14 13 11 17 17 C 1.53787 * 87.07963 * 89.11687 * 16 14 13 18 18 H 1.08994 * 113.61447 * 270.88515 * 17 16 14 19 19 C 1.50702 * 113.61150 * 139.98062 * 17 16 14 20 20 C 1.38245 * 119.97506 * 299.72393 * 19 17 16 21 21 C 1.38198 * 120.02478 * 179.76902 * 20 19 17 22 22 C 1.38461 * 119.97522 * 0.51105 * 21 20 19 23 23 F 1.35096 * 120.02887 * 179.76531 * 22 21 20 24 24 C 1.38462 * 119.94398 * 359.74847 * 22 21 20 25 25 C 1.38193 * 119.97608 * 359.97438 * 24 22 21 26 26 C 1.53779 * 113.61564 * 252.49989 * 14 13 11 27 27 C 1.38169 * 119.97201 * 65.28956 * 4 2 1 28 28 H 0.96705 * 113.99981 * 300.00235 * 1 2 3 29 29 H 1.08998 * 109.46652 * 239.99818 * 2 1 3 30 30 H 1.48500 * 110.00015 * 178.68085 * 3 2 1 31 31 H 1.48499 * 110.00099 * 299.99983 * 3 2 1 32 32 H 1.08002 * 119.94257 * 359.97438 * 5 4 2 33 33 H 1.07997 * 119.96914 * 180.02562 * 6 5 4 34 34 H 1.08008 * 120.03020 * 179.97438 * 7 6 5 35 35 H 1.08994 * 109.47349 * 59.99994 * 10 9 8 36 36 H 1.08996 * 109.47042 * 299.99329 * 10 9 8 37 37 H 0.96996 * 119.99920 * 359.97438 * 13 11 10 38 38 H 1.08997 * 113.61646 * 334.57319 * 16 14 13 39 39 H 1.08998 * 113.69354 * 203.67627 * 16 14 13 40 40 H 1.08004 * 119.98571 * 0.02562 * 20 19 17 41 41 H 1.07999 * 120.01076 * 180.25591 * 21 20 19 42 42 H 1.07996 * 120.00693 * 179.97438 * 24 22 21 43 43 H 1.08006 * 119.98860 * 180.02562 * 25 24 22 44 44 H 1.09002 * 113.61557 * 156.33711 * 26 14 13 45 45 H 1.09004 * 113.61501 * 25.43131 * 26 14 13 46 46 H 1.07995 * 120.02897 * 0.02562 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7105 1.2304 5 6 2.6387 -0.0117 2.1910 6 6 3.1006 -0.6607 3.3213 7 6 2.8567 -2.0093 3.4930 8 6 2.1472 -2.7130 2.5304 9 8 1.9064 -4.0400 2.6967 10 6 2.4127 -4.6469 3.8873 11 6 2.0510 -6.1099 3.8981 12 8 1.4214 -6.5858 2.9773 13 7 2.4274 -6.8894 4.9313 14 6 2.0754 -8.3115 4.9421 15 1 1.8951 -8.7115 3.9442 16 6 3.0250 -9.1746 5.7895 17 6 2.0997 -8.8818 6.9824 18 1 2.3682 -7.9797 7.5321 19 6 1.8775 -10.0716 7.8802 20 6 1.3034 -11.2223 7.3727 21 6 1.1035 -12.3156 8.1939 22 6 1.4688 -12.2547 9.5281 23 9 1.2695 -13.3212 10.3330 24 6 2.0387 -11.0998 10.0366 25 6 2.2429 -10.0097 9.2121 26 6 0.9750 -8.6660 5.9561 27 6 1.6897 -2.0609 1.3947 28 1 -0.3933 0.4418 0.7651 29 1 1.7923 -0.5139 -0.8900 30 1 3.5346 1.7702 0.0321 31 1 1.5615 2.4679 -1.2085 32 1 2.8310 1.0427 2.0582 33 1 3.6526 -0.1125 4.0705 34 1 3.2180 -2.5158 4.3759 35 1 1.9757 -4.1586 4.7582 36 1 3.4970 -4.5402 3.9167 37 1 2.9314 -6.5088 5.6675 38 1 4.0230 -8.7497 5.8965 39 1 3.0412 -10.2245 5.4968 40 1 1.0148 -11.2682 6.3329 41 1 0.6588 -13.2159 7.7962 42 1 2.3236 -11.0510 11.0771 43 1 2.6878 -9.1089 9.6084 44 1 0.4296 -9.5766 5.7080 45 1 0.3181 -7.8303 6.1975 46 1 1.1415 -2.6074 0.6417 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10466350_4860298.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:10:30 Heat of formation + Delta-G solvation = -62.324860 kcal Electronic energy + Delta-G solvation = -29492.244541 eV Core-core repulsion = 25036.308772 eV Total energy + Delta-G solvation = -4455.935769 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.141 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -49.82160 -41.85117 -41.33040 -40.30647 -39.16228 -38.50319 -37.21489 -34.70360 -32.52678 -32.22417 -31.92089 -31.33876 -29.31095 -26.92098 -26.86000 -26.00484 -24.20163 -23.72379 -23.07518 -22.51500 -21.70842 -20.37737 -19.38272 -18.83895 -18.51366 -17.68613 -17.63329 -17.47366 -17.30424 -17.10200 -16.74155 -16.66928 -16.52897 -16.15200 -15.72222 -15.58942 -15.43095 -15.16558 -14.92450 -14.65291 -14.60512 -14.29076 -14.16646 -14.03280 -13.98386 -13.81513 -13.68569 -13.47604 -13.00405 -12.99472 -12.60006 -12.35951 -12.22882 -11.99805 -11.97775 -11.84300 -11.69684 -11.41988 -10.97537 -10.48500 -10.27420 -10.15433 -9.97755 -9.54196 -9.31169 -5.04081 0.06621 0.15734 0.17708 0.35795 1.23306 1.38069 1.39584 1.63549 1.96919 2.46622 2.46974 2.62471 3.23296 3.27277 3.35943 3.46376 3.47459 3.51965 3.60817 3.67315 3.69930 3.75978 3.82887 3.84826 3.86866 3.96323 3.98478 4.14351 4.17686 4.30185 4.31821 4.44951 4.49793 4.54518 4.58088 4.65746 4.72743 4.81859 4.86280 4.92039 4.92606 4.97157 5.10288 5.18457 5.18848 5.30343 5.33873 5.39590 5.49042 5.60440 5.84198 6.16694 6.31512 6.57038 7.01015 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.537 6.537 2 C -0.071 4.071 3 Si 0.692 3.308 4 C -0.080 4.080 5 C -0.152 4.152 6 C -0.073 4.073 7 C -0.206 4.206 8 C 0.129 3.871 9 O -0.288 6.288 10 C 0.041 3.959 11 C 0.519 3.481 12 O -0.508 6.508 13 N -0.711 5.711 14 C 0.120 3.880 15 H 0.108 0.892 16 C -0.135 4.135 17 C -0.073 4.073 18 H 0.100 0.900 19 C -0.083 4.083 20 C -0.088 4.088 21 C -0.150 4.150 22 C 0.095 3.905 23 F -0.140 7.140 24 C -0.151 4.151 25 C -0.086 4.086 26 C -0.145 4.145 27 C -0.120 4.120 28 H 0.379 0.621 29 H 0.115 0.885 30 H -0.257 1.257 31 H -0.254 1.254 32 H 0.130 0.870 33 H 0.132 0.868 34 H 0.130 0.870 35 H 0.096 0.904 36 H 0.095 0.905 37 H 0.403 0.597 38 H 0.079 0.921 39 H 0.100 0.900 40 H 0.134 0.866 41 H 0.136 0.864 42 H 0.136 0.864 43 H 0.132 0.868 44 H 0.097 0.903 45 H 0.077 0.923 46 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.141 3.616 5.602 7.370 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.343 6.343 2 C -0.181 4.181 3 Si 0.593 3.407 4 C -0.080 4.080 5 C -0.170 4.170 6 C -0.091 4.091 7 C -0.225 4.225 8 C 0.084 3.916 9 O -0.200 6.200 10 C -0.038 4.038 11 C 0.303 3.697 12 O -0.381 6.381 13 N -0.365 5.365 14 C 0.015 3.985 15 H 0.126 0.874 16 C -0.173 4.173 17 C -0.091 4.091 18 H 0.118 0.882 19 C -0.083 4.083 20 C -0.106 4.106 21 C -0.169 4.169 22 C 0.076 3.924 23 F -0.118 7.118 24 C -0.170 4.170 25 C -0.104 4.104 26 C -0.183 4.183 27 C -0.139 4.139 28 H 0.227 0.773 29 H 0.133 0.867 30 H -0.182 1.182 31 H -0.179 1.179 32 H 0.147 0.853 33 H 0.150 0.850 34 H 0.148 0.852 35 H 0.113 0.887 36 H 0.113 0.887 37 H 0.237 0.763 38 H 0.097 0.903 39 H 0.119 0.881 40 H 0.152 0.848 41 H 0.154 0.846 42 H 0.154 0.846 43 H 0.150 0.850 44 H 0.116 0.884 45 H 0.095 0.905 46 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges 3.132 3.379 3.815 5.982 hybrid contribution 0.495 -0.722 0.831 1.207 sum 3.627 2.657 4.646 6.465 Atomic orbital electron populations 1.86532 1.16848 1.81714 1.49184 1.25136 0.85442 1.10267 0.97301 0.94701 0.81007 0.77751 0.87194 1.20164 0.97745 0.93576 0.96534 1.20929 1.01406 0.99573 0.95106 1.20907 0.97557 0.93607 0.97005 1.21292 1.04710 0.96081 1.00408 1.19042 0.95407 0.82415 0.94783 1.86174 1.73772 1.20097 1.40003 1.22452 1.00698 0.91777 0.88863 1.20044 0.79741 0.87487 0.82410 1.90797 1.37724 1.74593 1.35014 1.45470 1.58294 1.09325 1.23372 1.21871 0.95947 0.80102 1.00557 0.87389 1.23444 0.98235 1.01143 0.94477 1.21601 0.97644 0.96024 0.93828 0.88211 1.19735 0.99195 0.95304 0.94100 1.20897 0.97794 0.91833 1.00044 1.21194 1.02837 1.00611 0.92244 1.17785 1.01115 0.84658 0.88892 1.91522 1.92976 1.54365 1.72945 1.21194 1.01736 0.92650 1.01431 1.20926 0.98678 0.98084 0.92761 1.23595 0.96570 1.02974 0.95179 1.20285 1.02856 0.93660 0.97087 0.77327 0.86715 1.18223 1.17921 0.85305 0.85046 0.85236 0.88658 0.88706 0.76258 0.90277 0.88113 0.84822 0.84581 0.84637 0.85022 0.88424 0.90476 0.84639 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.42 12.84 -35.23 -0.45 -0.87 16 2 C -0.07 -0.01 2.80 36.00 0.10 0.09 16 3 Si 0.69 -0.75 29.80 -169.99 -5.07 -5.82 16 4 C -0.08 -0.05 5.35 -104.64 -0.56 -0.61 16 5 C -0.15 0.12 8.67 -39.56 -0.34 -0.22 16 6 C -0.07 0.10 10.04 -39.61 -0.40 -0.30 16 7 C -0.21 0.16 9.04 -39.43 -0.36 -0.20 16 8 C 0.13 0.21 6.69 -39.21 -0.26 -0.05 16 9 O -0.29 -0.77 9.67 -39.31 -0.38 -1.15 16 10 C 0.04 -0.06 5.22 36.01 0.19 0.13 16 11 C 0.52 0.34 7.91 -10.98 -0.09 0.26 16 12 O -0.51 -2.99 16.10 -14.35 -0.23 -3.22 16 13 N -0.71 1.92 5.26 -53.01 -0.28 1.64 16 14 C 0.12 -0.25 4.32 -67.12 -0.29 -0.54 16 15 H 0.11 -0.01 7.47 -51.93 -0.39 -0.40 16 16 C -0.14 0.49 7.29 -25.92 -0.19 0.30 16 17 C -0.07 0.25 3.86 -90.95 -0.35 -0.10 16 18 H 0.10 -0.47 8.09 -51.93 -0.42 -0.89 16 19 C -0.08 0.14 5.29 -104.62 -0.55 -0.41 16 20 C -0.09 0.11 8.62 -39.59 -0.34 -0.23 16 21 C -0.15 0.00 10.03 -39.51 -0.40 -0.40 16 22 C 0.09 0.12 7.30 -39.42 -0.29 -0.16 16 23 F -0.14 -0.41 17.27 2.25 0.04 -0.37 16 24 C -0.15 0.01 10.03 -39.52 -0.40 -0.38 16 25 C -0.09 0.12 9.71 -39.60 -0.38 -0.26 16 26 C -0.14 0.36 7.25 -25.92 -0.19 0.17 16 27 C -0.12 -0.26 9.63 -39.43 -0.38 -0.64 16 28 H 0.38 -1.23 8.70 45.56 0.40 -0.83 16 29 H 0.12 0.08 7.96 -51.93 -0.41 -0.33 16 30 H -0.26 -0.31 7.11 56.52 0.40 0.10 16 31 H -0.25 -0.56 7.11 56.52 0.40 -0.16 16 32 H 0.13 -0.36 4.90 -52.49 -0.26 -0.62 16 33 H 0.13 -0.48 8.06 -52.49 -0.42 -0.91 16 34 H 0.13 -0.46 6.30 -52.48 -0.33 -0.79 16 35 H 0.10 -0.40 7.66 -51.93 -0.40 -0.79 16 36 H 0.10 -0.38 7.66 -51.93 -0.40 -0.78 16 37 H 0.40 -2.38 8.70 -40.82 -0.36 -2.74 16 38 H 0.08 -0.33 8.14 -51.93 -0.42 -0.75 16 39 H 0.10 -0.35 7.73 -51.93 -0.40 -0.75 16 40 H 0.13 -0.40 6.64 -52.48 -0.35 -0.75 16 41 H 0.14 -0.16 8.06 -52.49 -0.42 -0.59 16 42 H 0.14 -0.19 8.06 -52.49 -0.42 -0.61 16 43 H 0.13 -0.46 8.06 -52.48 -0.42 -0.89 16 44 H 0.10 -0.26 6.29 -51.93 -0.33 -0.58 16 45 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 46 H 0.14 0.39 8.06 -52.49 -0.42 -0.03 16 LS Contribution 388.86 15.07 5.86 5.86 Total: 0.00 -10.36 388.86 -11.78 -22.14 By element: Atomic # 1 Polarization: -8.85 SS G_CDS: -5.80 Total: -14.65 kcal Atomic # 6 Polarization: 1.92 SS G_CDS: -5.47 Total: -3.55 kcal Atomic # 7 Polarization: 1.92 SS G_CDS: -0.28 Total: 1.64 kcal Atomic # 8 Polarization: -4.18 SS G_CDS: -1.06 Total: -5.24 kcal Atomic # 9 Polarization: -0.41 SS G_CDS: 0.04 Total: -0.37 kcal Atomic # 14 Polarization: -0.75 SS G_CDS: -5.07 Total: -5.82 kcal Total LS contribution 5.86 Total: 5.86 kcal Total: -10.36 -11.78 -22.14 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10466350_4860298.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -40.188 kcal (2) G-P(sol) polarization free energy of solvation -10.356 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -50.545 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.780 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.136 kcal (6) G-S(sol) free energy of system = (1) + (5) -62.325 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds