Wall clock time and date at job start Sat Mar 6 2021 16:10:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86296 * 109.47183 * 2 1 4 4 C 1.50698 * 109.47171 * 120.00312 * 2 1 3 5 5 C 1.38249 * 119.97135 * 245.00109 * 4 2 1 6 6 C 1.38282 * 120.11067 * 179.97438 * 5 4 2 7 7 C 1.38120 * 120.05683 * 0.03718 * 6 5 4 8 8 C 1.38753 * 119.94798 * 359.97438 * 7 6 5 9 9 O 1.35892 * 120.06161 * 179.97438 * 8 7 6 10 10 C 1.42905 * 116.99729 * 0.02562 * 9 8 7 11 11 C 1.50705 * 109.46842 * 179.97438 * 10 9 8 12 12 O 1.21278 * 120.00250 * 359.97438 * 11 10 9 13 13 N 1.34783 * 119.99542 * 179.97438 * 11 10 9 14 14 C 1.46502 * 119.99683 * 179.97438 * 13 11 10 15 15 H 1.09007 * 112.90475 * 23.75266 * 14 13 11 16 16 C 1.53779 * 113.61301 * 154.99921 * 14 13 11 17 17 C 1.53787 * 87.07963 * 89.11687 * 16 14 13 18 18 H 1.08994 * 113.61447 * 270.88515 * 17 16 14 19 19 C 1.50702 * 113.61150 * 139.98062 * 17 16 14 20 20 C 1.38245 * 119.97506 * 299.72393 * 19 17 16 21 21 C 1.38198 * 120.02478 * 179.76902 * 20 19 17 22 22 C 1.38461 * 119.97522 * 0.51105 * 21 20 19 23 23 F 1.35096 * 120.02887 * 179.76531 * 22 21 20 24 24 C 1.38462 * 119.94398 * 359.74847 * 22 21 20 25 25 C 1.38193 * 119.97608 * 359.97438 * 24 22 21 26 26 C 1.53779 * 113.61564 * 252.49989 * 14 13 11 27 27 C 1.38169 * 119.97201 * 65.28956 * 4 2 1 28 28 H 0.96705 * 113.99981 * 300.00235 * 1 2 3 29 29 H 1.08998 * 109.46652 * 239.99818 * 2 1 3 30 30 H 1.48500 * 110.00015 * 178.68085 * 3 2 1 31 31 H 1.48499 * 110.00099 * 299.99983 * 3 2 1 32 32 H 1.08002 * 119.94257 * 359.97438 * 5 4 2 33 33 H 1.07997 * 119.96914 * 180.02562 * 6 5 4 34 34 H 1.08008 * 120.03020 * 179.97438 * 7 6 5 35 35 H 1.08994 * 109.47349 * 59.99994 * 10 9 8 36 36 H 1.08996 * 109.47042 * 299.99329 * 10 9 8 37 37 H 0.96996 * 119.99920 * 359.97438 * 13 11 10 38 38 H 1.08997 * 113.61646 * 334.57319 * 16 14 13 39 39 H 1.08998 * 113.69354 * 203.67627 * 16 14 13 40 40 H 1.08004 * 119.98571 * 0.02562 * 20 19 17 41 41 H 1.07999 * 120.01076 * 180.25591 * 21 20 19 42 42 H 1.07996 * 120.00693 * 179.97438 * 24 22 21 43 43 H 1.08006 * 119.98860 * 180.02562 * 25 24 22 44 44 H 1.09002 * 113.61557 * 156.33711 * 26 14 13 45 45 H 1.09004 * 113.61501 * 25.43131 * 26 14 13 46 46 H 1.07995 * 120.02897 * 0.02562 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7105 1.2304 5 6 2.6387 -0.0117 2.1910 6 6 3.1006 -0.6607 3.3213 7 6 2.8567 -2.0093 3.4930 8 6 2.1472 -2.7130 2.5304 9 8 1.9064 -4.0400 2.6967 10 6 2.4127 -4.6469 3.8873 11 6 2.0510 -6.1099 3.8981 12 8 1.4214 -6.5858 2.9773 13 7 2.4274 -6.8894 4.9313 14 6 2.0754 -8.3115 4.9421 15 1 1.8951 -8.7115 3.9442 16 6 3.0250 -9.1746 5.7895 17 6 2.0997 -8.8818 6.9824 18 1 2.3682 -7.9797 7.5321 19 6 1.8775 -10.0716 7.8802 20 6 1.3034 -11.2223 7.3727 21 6 1.1035 -12.3156 8.1939 22 6 1.4688 -12.2547 9.5281 23 9 1.2695 -13.3212 10.3330 24 6 2.0387 -11.0998 10.0366 25 6 2.2429 -10.0097 9.2121 26 6 0.9750 -8.6660 5.9561 27 6 1.6897 -2.0609 1.3947 28 1 -0.3933 0.4418 0.7651 29 1 1.7923 -0.5139 -0.8900 30 1 3.5346 1.7702 0.0321 31 1 1.5615 2.4679 -1.2085 32 1 2.8310 1.0427 2.0582 33 1 3.6526 -0.1125 4.0705 34 1 3.2180 -2.5158 4.3759 35 1 1.9757 -4.1586 4.7582 36 1 3.4970 -4.5402 3.9167 37 1 2.9314 -6.5088 5.6675 38 1 4.0230 -8.7497 5.8965 39 1 3.0412 -10.2245 5.4968 40 1 1.0148 -11.2682 6.3329 41 1 0.6588 -13.2159 7.7962 42 1 2.3236 -11.0510 11.0771 43 1 2.6878 -9.1089 9.6084 44 1 0.4296 -9.5766 5.7080 45 1 0.3181 -7.8303 6.1975 46 1 1.1415 -2.6074 0.6417 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10466350_4860298.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:10:29 Heat of formation + Delta-G solvation = -60.863836 kcal Electronic energy + Delta-G solvation = -29492.181186 eV Core-core repulsion = 25036.308772 eV Total energy + Delta-G solvation = -4455.872414 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.141 amu Computer time = 1.07 seconds Orbital eigenvalues (eV) -49.92271 -41.77136 -41.24790 -40.28286 -39.11222 -38.48527 -37.21531 -34.67544 -32.47000 -32.12600 -31.85199 -31.26522 -29.21182 -26.83831 -26.69604 -25.87015 -24.10310 -23.66937 -23.01668 -22.44447 -21.65781 -20.22223 -19.32831 -18.80185 -18.49557 -17.66463 -17.56124 -17.40145 -17.27758 -17.03237 -16.68282 -16.62683 -16.54343 -16.17151 -15.66434 -15.56238 -15.37956 -15.11939 -14.82328 -14.62435 -14.47194 -14.21426 -14.17763 -14.01885 -13.93373 -13.67467 -13.52947 -13.36766 -12.92281 -12.92168 -12.60242 -12.19538 -12.13340 -12.01503 -11.85999 -11.68048 -11.66950 -11.23964 -11.04078 -10.48720 -10.18546 -10.06357 -9.93257 -9.48318 -9.27868 -4.98740 0.12109 0.21333 0.27108 0.39667 1.28000 1.40405 1.47647 1.66270 1.98007 2.55722 2.57670 2.68023 3.30240 3.45887 3.48688 3.54303 3.66354 3.68767 3.70203 3.82709 3.85477 3.95729 3.96812 4.00949 4.09453 4.13896 4.21572 4.25736 4.32604 4.34912 4.42159 4.49674 4.62595 4.65263 4.78120 4.84306 4.89835 4.98410 5.01964 5.04500 5.05586 5.13911 5.19062 5.25098 5.28614 5.37744 5.45573 5.47461 5.64701 5.70876 5.92706 6.27540 6.46110 6.75157 7.11433 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.558 6.558 2 C -0.087 4.087 3 Si 0.796 3.204 4 C -0.086 4.086 5 C -0.156 4.156 6 C -0.070 4.070 7 C -0.201 4.201 8 C 0.113 3.887 9 O -0.325 6.325 10 C 0.038 3.962 11 C 0.514 3.486 12 O -0.574 6.574 13 N -0.690 5.690 14 C 0.113 3.887 15 H 0.081 0.919 16 C -0.124 4.124 17 C -0.061 4.061 18 H 0.123 0.877 19 C -0.081 4.081 20 C -0.092 4.092 21 C -0.161 4.161 22 C 0.063 3.937 23 F -0.156 7.156 24 C -0.160 4.160 25 C -0.086 4.086 26 C -0.145 4.145 27 C -0.152 4.152 28 H 0.396 0.604 29 H 0.099 0.901 30 H -0.281 1.281 31 H -0.302 1.302 32 H 0.151 0.849 33 H 0.165 0.835 34 H 0.163 0.837 35 H 0.128 0.872 36 H 0.126 0.874 37 H 0.423 0.577 38 H 0.094 0.906 39 H 0.099 0.901 40 H 0.147 0.853 41 H 0.140 0.860 42 H 0.144 0.856 43 H 0.158 0.842 44 H 0.095 0.905 45 H 0.071 0.929 46 H 0.109 0.891 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.963 5.682 7.902 10.925 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.366 6.366 2 C -0.195 4.195 3 Si 0.701 3.299 4 C -0.086 4.086 5 C -0.173 4.173 6 C -0.088 4.088 7 C -0.220 4.220 8 C 0.068 3.932 9 O -0.238 6.238 10 C -0.040 4.040 11 C 0.301 3.699 12 O -0.452 6.452 13 N -0.344 5.344 14 C 0.008 3.992 15 H 0.099 0.901 16 C -0.162 4.162 17 C -0.079 4.079 18 H 0.141 0.859 19 C -0.082 4.082 20 C -0.110 4.110 21 C -0.180 4.180 22 C 0.044 3.956 23 F -0.135 7.135 24 C -0.178 4.178 25 C -0.104 4.104 26 C -0.184 4.184 27 C -0.171 4.171 28 H 0.246 0.754 29 H 0.116 0.884 30 H -0.207 1.207 31 H -0.230 1.230 32 H 0.168 0.832 33 H 0.182 0.818 34 H 0.180 0.820 35 H 0.146 0.854 36 H 0.144 0.856 37 H 0.261 0.739 38 H 0.112 0.888 39 H 0.117 0.883 40 H 0.165 0.835 41 H 0.157 0.843 42 H 0.162 0.838 43 H 0.176 0.824 44 H 0.113 0.887 45 H 0.089 0.911 46 H 0.127 0.873 Dipole moment (debyes) X Y Z Total from point charges 4.967 5.425 6.192 9.615 hybrid contribution -0.087 -1.394 0.076 1.399 sum 4.880 4.031 6.268 8.908 Atomic orbital electron populations 1.86484 1.17390 1.82321 1.50445 1.25433 0.85307 1.11901 0.96890 0.93563 0.77716 0.74056 0.84595 1.20205 0.98292 0.93031 0.97076 1.21218 1.00634 1.00595 0.94867 1.21355 0.96716 0.93544 0.97142 1.21647 1.03413 0.96382 1.00534 1.19193 0.96320 0.82318 0.95336 1.86124 1.74692 1.20860 1.42129 1.22740 1.02628 0.89967 0.88641 1.20582 0.78720 0.88643 0.81977 1.90772 1.40941 1.75890 1.37590 1.45315 1.57238 1.08841 1.23021 1.21864 0.97220 0.80601 0.99552 0.90089 1.23384 0.98565 1.00766 0.93464 1.21622 0.96810 0.96132 0.93354 0.85910 1.19969 0.98273 0.95530 0.94384 1.21120 0.97607 0.91711 1.00576 1.21353 1.03133 1.01406 0.92111 1.18142 1.02963 0.85010 0.89441 1.91470 1.93348 1.55263 1.73454 1.21410 1.01605 0.92603 1.02222 1.21241 0.98073 0.98446 0.92601 1.23588 0.96682 1.02692 0.95424 1.20303 1.04442 0.94657 0.97659 0.75440 0.88356 1.20745 1.23027 0.83155 0.81780 0.81997 0.85428 0.85603 0.73893 0.88790 0.88278 0.83532 0.84253 0.83828 0.82398 0.88666 0.91071 0.87286 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -1.76 12.84 -148.98 -1.91 -3.67 16 2 C -0.09 -0.15 2.80 71.24 0.20 0.05 16 3 Si 0.80 -1.81 29.80 68.60 2.04 0.24 16 4 C -0.09 -0.17 5.35 -19.88 -0.11 -0.27 16 5 C -0.16 0.47 8.67 22.28 0.19 0.66 16 6 C -0.07 0.38 10.04 22.25 0.22 0.60 16 7 C -0.20 0.75 9.04 22.37 0.20 0.95 16 8 C 0.11 0.42 6.69 22.51 0.15 0.57 16 9 O -0.32 -2.08 9.67 -73.30 -0.71 -2.78 16 10 C 0.04 -0.16 5.22 71.24 0.37 0.21 16 11 C 0.51 0.82 7.91 87.66 0.69 1.51 16 12 O -0.57 -8.15 16.10 16.01 0.26 -7.89 16 13 N -0.69 4.44 5.26 -440.02 -2.32 2.12 16 14 C 0.11 -0.49 4.32 45.52 0.20 -0.29 16 15 H 0.08 0.14 7.47 -2.38 -0.02 0.12 16 16 C -0.12 1.08 7.29 31.12 0.23 1.30 16 17 C -0.06 0.54 3.86 -11.01 -0.04 0.50 16 18 H 0.12 -1.60 8.09 -2.39 -0.02 -1.62 16 19 C -0.08 0.38 5.29 -19.86 -0.11 0.28 16 20 C -0.09 0.25 8.62 22.26 0.19 0.44 16 21 C -0.16 -0.15 10.03 22.31 0.22 0.08 16 22 C 0.06 0.23 7.30 22.38 0.16 0.40 16 23 F -0.16 -1.19 17.27 44.97 0.78 -0.42 16 24 C -0.16 0.05 10.03 22.31 0.22 0.27 16 25 C -0.09 0.38 9.71 22.26 0.22 0.60 16 26 C -0.15 0.79 7.25 31.12 0.23 1.01 16 27 C -0.15 -0.98 9.63 22.37 0.22 -0.77 16 28 H 0.40 -2.24 8.70 -74.05 -0.64 -2.89 16 29 H 0.10 0.41 7.96 -2.39 -0.02 0.39 16 30 H -0.28 -0.45 7.11 99.48 0.71 0.26 16 31 H -0.30 -1.68 7.11 99.48 0.71 -0.98 16 32 H 0.15 -1.20 4.90 -2.91 -0.01 -1.22 16 33 H 0.16 -1.95 8.06 -2.91 -0.02 -1.98 16 34 H 0.16 -1.80 6.30 -2.91 -0.02 -1.81 16 35 H 0.13 -1.41 7.66 -2.39 -0.02 -1.43 16 36 H 0.13 -1.36 7.66 -2.39 -0.02 -1.37 16 37 H 0.42 -6.16 8.70 -92.71 -0.81 -6.97 16 38 H 0.09 -1.04 8.14 -2.39 -0.02 -1.06 16 39 H 0.10 -0.78 7.73 -2.39 -0.02 -0.79 16 40 H 0.15 -0.87 6.64 -2.91 -0.02 -0.89 16 41 H 0.14 -0.13 8.06 -2.91 -0.02 -0.15 16 42 H 0.14 -0.41 8.06 -2.91 -0.02 -0.43 16 43 H 0.16 -1.59 8.06 -2.91 -0.02 -1.62 16 44 H 0.09 -0.47 6.29 -2.39 -0.02 -0.49 16 45 H 0.07 -0.27 8.14 -2.39 -0.02 -0.29 16 46 H 0.11 1.12 8.06 -2.91 -0.02 1.10 16 Total: 0.00 -29.85 388.86 1.43 -28.41 By element: Atomic # 1 Polarization: -23.75 SS G_CDS: -0.37 Total: -24.12 kcal Atomic # 6 Polarization: 4.45 SS G_CDS: 3.66 Total: 8.11 kcal Atomic # 7 Polarization: 4.44 SS G_CDS: -2.32 Total: 2.12 kcal Atomic # 8 Polarization: -11.98 SS G_CDS: -2.36 Total: -14.35 kcal Atomic # 9 Polarization: -1.19 SS G_CDS: 0.78 Total: -0.42 kcal Atomic # 14 Polarization: -1.81 SS G_CDS: 2.04 Total: 0.24 kcal Total: -29.85 1.43 -28.41 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10466350_4860298.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -32.451 kcal (2) G-P(sol) polarization free energy of solvation -29.846 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -62.298 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.434 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.412 kcal (6) G-S(sol) free energy of system = (1) + (5) -60.864 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.07 seconds