Wall clock time and date at job start Sat Mar 6 2021 16:10:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.35992 * 117.00142 * 2 1 4 4 C 1.39154 * 120.07493 * 179.97438 * 3 2 1 5 5 O 1.35998 * 120.07027 * 359.97109 * 4 3 2 6 6 C 1.42906 * 116.99536 * 180.02562 * 5 4 3 7 7 C 1.50706 * 109.46775 * 180.02562 * 6 5 4 8 8 O 1.21287 * 119.99893 * 0.02562 * 7 6 5 9 9 N 1.34770 * 119.99790 * 180.02562 * 7 6 5 10 10 C 1.46504 * 119.99792 * 180.02562 * 9 7 6 11 11 H 1.09003 * 112.84941 * 336.19101 * 10 9 7 12 12 C 1.53776 * 113.61659 * 107.49926 * 10 9 7 13 13 C 1.53790 * 87.07868 * 89.11439 * 12 10 9 14 14 H 1.08994 * 113.69407 * 270.86858 * 13 12 10 15 15 C 1.50705 * 113.61118 * 139.98085 * 13 12 10 16 16 C 1.38243 * 119.97663 * 322.22311 * 15 13 12 17 17 C 1.38197 * 120.02816 * 179.76560 * 16 15 13 18 18 C 1.38461 * 119.97077 * 0.51373 * 17 16 15 19 19 F 1.35097 * 120.02626 * 179.76260 * 18 17 16 20 20 C 1.38460 * 119.94971 * 359.74636 * 18 17 16 21 21 C 1.38202 * 119.97424 * 359.97438 * 20 18 17 22 22 C 1.53782 * 87.08138 * 25.43380 * 13 12 10 23 23 C 1.38563 * 119.85432 * 180.02562 * 4 3 2 24 24 C 1.38241 * 120.00134 * 359.97438 * 23 4 3 25 25 C 1.38258 * 120.14553 * 0.03137 * 24 23 4 26 26 C 1.50699 * 119.92693 * 179.97438 * 25 24 23 27 27 O 1.42901 * 109.46830 * 119.99588 * 26 25 24 28 28 Si 1.86298 * 109.46950 * 0.02562 * 26 25 24 29 29 C 1.38240 * 120.14267 * 0.22300 * 25 24 23 30 30 H 1.09007 * 109.47004 * 180.02562 * 1 2 3 31 31 H 1.08995 * 109.47531 * 300.00274 * 1 2 3 32 32 H 1.08998 * 109.46907 * 60.00490 * 1 2 3 33 33 H 1.09001 * 109.47216 * 300.00455 * 6 5 4 34 34 H 1.08990 * 109.47221 * 60.00683 * 6 5 4 35 35 H 0.96995 * 120.00217 * 359.97438 * 9 7 6 36 36 H 1.09003 * 113.61785 * 203.65822 * 12 10 9 37 37 H 1.09000 * 113.61789 * 334.57116 * 12 10 9 38 38 H 1.08007 * 119.98598 * 0.02599 * 16 15 13 39 39 H 1.07994 * 120.01479 * 180.25783 * 17 16 15 40 40 H 1.07995 * 120.01574 * 180.02562 * 20 18 17 41 41 H 1.07995 * 119.98665 * 180.02562 * 21 20 18 42 42 H 1.08998 * 113.61226 * 220.01988 * 22 13 12 43 43 H 1.08997 * 113.69087 * 89.12952 * 22 13 12 44 44 H 1.07997 * 120.00025 * 180.02562 * 23 4 3 45 45 H 1.07994 * 119.92873 * 180.02562 * 24 23 4 46 46 H 1.08991 * 109.47351 * 239.99735 * 26 25 24 47 47 H 0.96708 * 114.00246 * 299.99864 * 27 26 25 48 48 H 1.48506 * 109.99834 * 180.02562 * 28 26 25 49 49 H 1.48502 * 110.00011 * 301.31529 * 28 26 25 50 50 H 1.08000 * 119.99501 * 179.74641 * 29 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 3.4359 1.2863 0.0005 5 8 4.1795 0.1476 0.0017 6 6 5.6003 0.3006 0.0027 7 6 6.2519 -1.0583 0.0032 8 8 5.5669 -2.0592 0.0023 9 7 7.5957 -1.1613 0.0048 10 6 8.2291 -2.4823 0.0047 11 1 7.5829 -3.2615 0.4090 12 6 8.8790 -2.8538 -1.3385 13 6 10.1592 -2.1811 -0.8154 14 1 10.2171 -1.1159 -1.0391 15 6 11.4208 -2.9236 -1.1734 16 6 11.4346 -4.3059 -1.1657 17 6 12.5895 -4.9879 -1.4986 18 6 13.7362 -4.2860 -1.8296 19 9 14.8673 -4.9516 -2.1505 20 6 13.7228 -2.9015 -1.8318 21 6 12.5650 -2.2217 -1.5041 22 6 9.6462 -2.4860 0.6019 23 6 4.0603 2.5233 0.0011 24 6 3.3030 3.6798 0.0005 25 6 1.9224 3.6057 0.0001 26 6 1.1016 4.8696 0.0001 27 8 0.2777 4.9024 -1.1670 28 14 2.2365 6.3470 -0.0001 29 6 1.2933 2.3748 0.0049 30 1 -0.3633 -1.0277 0.0005 31 1 -0.3634 0.5138 0.8899 32 1 -0.3633 0.5138 -0.8900 33 1 5.9073 0.8501 -0.8872 34 1 5.9058 0.8507 0.8927 35 1 8.1434 -0.3608 0.0052 36 1 8.9817 -3.9281 -1.4917 37 1 8.4361 -2.3437 -2.1939 38 1 10.5411 -4.8532 -0.9035 39 1 12.5989 -6.0678 -1.4965 40 1 14.6165 -2.3530 -2.0902 41 1 12.5542 -1.1418 -1.5062 42 1 9.8224 -1.6789 1.3130 43 1 9.9580 -3.4593 0.9806 44 1 5.1385 2.5839 0.0011 45 1 3.7908 4.6433 0.0005 46 1 0.4725 4.8943 0.8898 47 1 0.7718 4.8831 -1.9980 48 1 1.4393 7.5999 0.0006 49 1 3.1212 6.3080 1.1920 50 1 0.2147 2.3197 0.0087 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10466350_60476.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:10:44 Heat of formation + Delta-G solvation = -93.442554 kcal Electronic energy + Delta-G solvation = -34072.550253 eV Core-core repulsion = 29141.045309 eV Total energy + Delta-G solvation = -4931.504944 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 388.156 amu Computer time = 1.48 seconds Orbital eigenvalues (eV) -49.91066 -41.86559 -41.48138 -40.42682 -39.38878 -38.90424 -38.46832 -36.90679 -34.63277 -32.11957 -32.07200 -31.53950 -31.32835 -29.42970 -28.45057 -26.67015 -26.27468 -25.80758 -24.11424 -23.62260 -22.72988 -22.46461 -21.80518 -20.21454 -19.77977 -18.77364 -18.50762 -18.37688 -17.93065 -17.53666 -17.39004 -17.20797 -16.87765 -16.67334 -16.61193 -16.59863 -16.08550 -15.90902 -15.67414 -15.59180 -15.47545 -15.30651 -14.95124 -14.61001 -14.45511 -14.30077 -14.17939 -13.92094 -13.76063 -13.67045 -13.56935 -13.49924 -13.36288 -12.90295 -12.63806 -12.53233 -12.17501 -12.16308 -12.05723 -11.99621 -11.84133 -11.72152 -11.64763 -11.21595 -10.99415 -10.42944 -10.14699 -10.04651 -9.77940 -9.46699 -8.90235 -4.95853 0.13632 0.17772 0.28552 0.28787 1.34796 1.45939 1.48737 1.67824 2.01150 2.31388 2.57098 2.57454 2.58397 3.31646 3.48461 3.49692 3.53903 3.68544 3.69914 3.73136 3.84503 3.88151 3.92461 3.97340 3.99239 4.06467 4.14963 4.15227 4.23816 4.29497 4.30276 4.34233 4.37257 4.43889 4.50460 4.64313 4.65607 4.67370 4.80388 4.87086 4.91924 5.01419 5.04295 5.06603 5.07401 5.13340 5.16424 5.20729 5.30206 5.38142 5.49948 5.60407 5.67360 5.94211 5.97930 6.43172 6.55758 6.78374 7.16960 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.021 3.979 2 O -0.335 6.335 3 C 0.076 3.924 4 C 0.085 3.915 5 O -0.315 6.315 6 C 0.034 3.966 7 C 0.514 3.486 8 O -0.573 6.573 9 N -0.690 5.690 10 C 0.113 3.887 11 H 0.080 0.920 12 C -0.145 4.145 13 C -0.061 4.061 14 H 0.124 0.876 15 C -0.081 4.081 16 C -0.092 4.092 17 C -0.162 4.162 18 C 0.063 3.937 19 F -0.157 7.157 20 C -0.160 4.160 21 C -0.086 4.086 22 C -0.124 4.124 23 C -0.158 4.158 24 C -0.110 4.110 25 C -0.119 4.119 26 C -0.077 4.077 27 O -0.558 6.558 28 Si 0.788 3.212 29 C -0.153 4.153 30 H 0.111 0.889 31 H 0.062 0.938 32 H 0.065 0.935 33 H 0.131 0.869 34 H 0.128 0.872 35 H 0.423 0.577 36 H 0.094 0.906 37 H 0.071 0.929 38 H 0.147 0.853 39 H 0.139 0.861 40 H 0.144 0.856 41 H 0.159 0.841 42 H 0.094 0.906 43 H 0.098 0.902 44 H 0.178 0.822 45 H 0.159 0.841 46 H 0.103 0.897 47 H 0.395 0.605 48 H -0.304 1.304 49 H -0.278 1.278 50 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.264 7.096 -0.866 8.324 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 O -0.249 6.249 3 C 0.031 3.969 4 C 0.039 3.961 5 O -0.229 6.229 6 C -0.044 4.044 7 C 0.301 3.699 8 O -0.451 6.451 9 N -0.344 5.344 10 C 0.008 3.992 11 H 0.098 0.902 12 C -0.184 4.184 13 C -0.079 4.079 14 H 0.142 0.858 15 C -0.081 4.081 16 C -0.110 4.110 17 C -0.180 4.180 18 C 0.044 3.956 19 F -0.136 7.136 20 C -0.179 4.179 21 C -0.103 4.103 22 C -0.162 4.162 23 C -0.176 4.176 24 C -0.128 4.128 25 C -0.120 4.120 26 C -0.186 4.186 27 O -0.366 6.366 28 Si 0.694 3.306 29 C -0.172 4.172 30 H 0.129 0.871 31 H 0.080 0.920 32 H 0.083 0.917 33 H 0.149 0.851 34 H 0.145 0.855 35 H 0.261 0.739 36 H 0.113 0.887 37 H 0.090 0.910 38 H 0.164 0.836 39 H 0.157 0.843 40 H 0.162 0.838 41 H 0.176 0.824 42 H 0.112 0.888 43 H 0.117 0.883 44 H 0.195 0.805 45 H 0.176 0.824 46 H 0.121 0.879 47 H 0.245 0.755 48 H -0.232 1.232 49 H -0.204 1.204 50 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges 3.613 6.677 -0.013 7.592 hybrid contribution -0.223 -0.683 0.246 0.759 sum 3.390 5.995 0.234 6.891 Atomic orbital electron populations 1.23274 0.76861 1.05179 1.02047 1.86187 1.22949 1.26691 1.89104 1.18678 0.89981 0.85551 1.02712 1.18583 0.88139 0.86579 1.02749 1.86226 1.18301 1.29036 1.89302 1.22793 0.79293 0.95098 1.07169 1.20585 0.83020 0.90843 0.75488 1.90781 1.64136 1.40246 1.49949 1.45305 1.04974 1.09634 1.74536 1.21857 0.94216 0.85260 0.97875 0.90189 1.23582 0.95461 1.02037 0.97282 1.21625 0.89554 1.00385 0.96312 0.85824 1.19979 0.95692 0.93432 0.99036 1.21118 0.97567 0.94327 0.98008 1.21350 0.92422 1.01518 1.02735 1.18141 0.82912 0.91356 1.03166 1.91469 1.50123 1.81275 1.90693 1.21413 1.01261 0.91963 1.03214 1.21247 0.90775 1.01526 0.96792 1.23386 0.92167 1.04387 0.96263 1.21392 1.02331 0.89235 1.04680 1.21018 0.92252 0.99067 1.00447 1.20202 0.94535 0.94772 1.02468 1.25277 0.99818 1.02559 0.90977 1.86463 1.36803 1.96946 1.16385 0.93630 0.78273 0.72341 0.86392 1.20997 1.00469 0.90623 1.05113 0.87092 0.91982 0.91667 0.85131 0.85493 0.73872 0.88748 0.91039 0.83557 0.84283 0.83836 0.82358 0.88778 0.88345 0.80483 0.82354 0.87930 0.75460 1.23248 1.20437 0.84292 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.05 9.81 113.37 1.11 1.16 16 2 O -0.33 -3.64 10.28 -79.59 -0.82 -4.46 16 3 C 0.08 0.58 6.70 22.57 0.15 0.73 16 4 C 0.08 0.39 6.70 22.57 0.15 0.54 16 5 O -0.31 -2.35 9.46 -67.11 -0.63 -2.99 16 6 C 0.03 -0.14 5.22 71.24 0.37 0.23 16 7 C 0.51 0.96 7.91 87.66 0.69 1.65 16 8 O -0.57 -8.49 16.10 15.98 0.26 -8.24 16 9 N -0.69 4.42 5.26 -440.02 -2.32 2.11 16 10 C 0.11 -0.48 4.32 45.52 0.20 -0.28 16 11 H 0.08 0.16 7.46 -2.39 -0.02 0.14 16 12 C -0.15 0.78 7.25 31.12 0.23 1.01 16 13 C -0.06 0.54 3.86 -11.01 -0.04 0.50 16 14 H 0.12 -1.64 8.09 -2.39 -0.02 -1.66 16 15 C -0.08 0.39 5.29 -19.86 -0.11 0.28 16 16 C -0.09 0.25 8.60 22.26 0.19 0.44 16 17 C -0.16 -0.15 10.03 22.31 0.22 0.07 16 18 C 0.06 0.23 7.30 22.38 0.16 0.40 16 19 F -0.16 -1.20 17.27 44.97 0.78 -0.42 16 20 C -0.16 0.05 10.03 22.31 0.22 0.28 16 21 C -0.09 0.39 9.71 22.26 0.22 0.60 16 22 C -0.12 1.07 7.29 31.12 0.23 1.30 16 23 C -0.16 0.59 9.04 22.35 0.20 0.79 16 24 C -0.11 0.46 8.66 22.28 0.19 0.65 16 25 C -0.12 0.05 5.39 -19.86 -0.11 -0.06 16 26 C -0.08 0.12 2.82 71.24 0.20 0.32 16 27 O -0.56 0.29 12.77 -148.98 -1.90 -1.61 16 28 Si 0.79 -3.72 29.78 68.60 2.04 -1.67 16 29 C -0.15 -0.54 8.60 22.35 0.19 -0.35 16 30 H 0.11 -0.02 8.14 -2.38 -0.02 -0.04 16 31 H 0.06 0.02 7.65 -2.39 -0.02 0.00 16 32 H 0.06 0.01 7.67 -2.39 -0.02 -0.01 16 33 H 0.13 -1.52 7.66 -2.39 -0.02 -1.54 16 34 H 0.13 -1.41 7.66 -2.39 -0.02 -1.42 16 35 H 0.42 -6.24 8.70 -92.71 -0.81 -7.04 16 36 H 0.09 -0.46 6.32 -2.39 -0.02 -0.47 16 37 H 0.07 -0.27 8.14 -2.39 -0.02 -0.29 16 38 H 0.15 -0.86 6.67 -2.91 -0.02 -0.88 16 39 H 0.14 -0.12 8.06 -2.91 -0.02 -0.15 16 40 H 0.14 -0.41 8.06 -2.91 -0.02 -0.44 16 41 H 0.16 -1.62 8.05 -2.91 -0.02 -1.64 16 42 H 0.09 -1.04 8.14 -2.39 -0.02 -1.06 16 43 H 0.10 -0.76 7.72 -2.39 -0.02 -0.78 16 44 H 0.18 -2.19 6.30 -2.91 -0.02 -2.21 16 45 H 0.16 -1.58 4.87 -2.91 -0.01 -1.59 16 46 H 0.10 0.01 7.96 -2.39 -0.02 -0.01 16 47 H 0.40 -3.41 8.70 -74.05 -0.64 -4.05 16 48 H -0.30 -1.08 7.11 99.48 0.71 -0.37 16 49 H -0.28 0.34 7.11 99.48 0.71 1.04 16 50 H 0.14 0.35 6.30 -2.91 -0.02 0.33 16 Total: 0.00 -32.85 417.98 1.69 -31.17 By element: Atomic # 1 Polarization: -23.76 SS G_CDS: -0.40 Total: -24.16 kcal Atomic # 6 Polarization: 5.60 SS G_CDS: 4.68 Total: 10.28 kcal Atomic # 7 Polarization: 4.42 SS G_CDS: -2.32 Total: 2.11 kcal Atomic # 8 Polarization: -14.20 SS G_CDS: -3.10 Total: -17.30 kcal Atomic # 9 Polarization: -1.20 SS G_CDS: 0.78 Total: -0.42 kcal Atomic # 14 Polarization: -3.72 SS G_CDS: 2.04 Total: -1.67 kcal Total: -32.85 1.69 -31.17 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10466350_60476.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -62.277 kcal (2) G-P(sol) polarization free energy of solvation -32.854 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -95.131 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.689 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.165 kcal (6) G-S(sol) free energy of system = (1) + (5) -93.443 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.48 seconds