Wall clock time and date at job start Sat Mar 6 2021 16:11:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.35959 * 117.00006 * 2 1 4 4 C 1.39453 * 120.12105 * 179.97438 * 3 2 1 5 5 O 1.34778 * 133.24256 * 0.02562 * 4 3 2 6 6 C 1.34922 * 110.84411 * 180.02562 * 5 4 3 7 7 C 1.46986 * 125.14428 * 179.97438 * 6 5 4 8 8 O 1.21650 * 120.00546 * 180.02562 * 7 6 5 9 9 N 1.34778 * 119.99505 * 0.02757 * 7 6 5 10 10 C 1.46508 * 119.99853 * 180.02562 * 9 7 6 11 11 H 1.08994 * 112.84419 * 336.19169 * 10 9 7 12 12 C 1.53778 * 113.61448 * 107.49915 * 10 9 7 13 13 C 1.53781 * 87.08091 * 89.11641 * 12 10 9 14 14 H 1.09001 * 113.69107 * 270.86824 * 13 12 10 15 15 C 1.50701 * 113.61451 * 139.98088 * 13 12 10 16 16 C 1.38246 * 119.97169 * 322.22734 * 15 13 12 17 17 C 1.38200 * 120.02452 * 179.73121 * 16 15 13 18 18 C 1.38464 * 119.97099 * 0.51761 * 17 16 15 19 19 F 1.35099 * 120.02391 * 179.72880 * 18 17 16 20 20 C 1.38462 * 119.94984 * 359.75774 * 18 17 16 21 21 C 1.38200 * 119.97418 * 359.97438 * 20 18 17 22 22 C 1.53777 * 87.08295 * 25.43005 * 13 12 10 23 23 C 1.35814 * 109.71808 * 359.97438 * 6 5 4 24 24 C 1.40609 * 119.13455 * 180.02562 * 4 3 2 25 25 C 1.39770 * 120.12172 * 359.75143 * 24 4 3 26 26 C 1.50706 * 120.09530 * 180.27049 * 25 24 4 27 27 O 1.42905 * 109.46812 * 75.23064 * 26 25 24 28 28 Si 1.86293 * 109.47432 * 195.22801 * 26 25 24 29 29 C 1.36627 * 119.81585 * 0.50434 * 25 24 4 30 30 C 1.38262 * 120.12296 * 359.97438 * 3 2 1 31 31 H 1.09000 * 109.47244 * 179.97438 * 1 2 3 32 32 H 1.08996 * 109.47153 * 300.00731 * 1 2 3 33 33 H 1.09010 * 109.46912 * 60.00454 * 1 2 3 34 34 H 0.96997 * 120.00111 * 359.97438 * 9 7 6 35 35 H 1.09002 * 113.61238 * 203.66222 * 12 10 9 36 36 H 1.08991 * 113.61621 * 334.56679 * 12 10 9 37 37 H 1.07998 * 119.99150 * 359.97438 * 16 15 13 38 38 H 1.07998 * 120.01774 * 180.25686 * 17 16 15 39 39 H 1.07995 * 120.01207 * 179.97438 * 20 18 17 40 40 H 1.07996 * 119.98734 * 180.02562 * 21 20 18 41 41 H 1.09000 * 113.61779 * 220.02039 * 22 13 12 42 42 H 1.09006 * 113.61614 * 89.11704 * 22 13 12 43 43 H 1.07999 * 126.95633 * 180.02562 * 23 6 5 44 44 H 1.09001 * 109.47093 * 315.22929 * 26 25 24 45 45 H 0.96693 * 114.00131 * 60.00248 * 27 26 25 46 46 H 1.48507 * 109.99950 * 58.68188 * 28 26 25 47 47 H 1.48500 * 110.00286 * 180.02562 * 28 26 25 48 48 H 1.08002 * 119.75872 * 179.77657 * 29 25 24 49 49 H 1.08002 * 119.65753 * 0.02562 * 30 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0463 1.2114 0.0000 4 6 3.4388 1.2873 0.0005 5 8 4.4142 0.3572 0.0007 6 6 5.6318 0.9385 0.0018 7 6 6.9131 0.2184 0.0028 8 8 7.9596 0.8387 0.0043 9 7 6.9286 -1.1293 0.0021 10 6 8.2058 -1.8472 0.0036 11 1 9.0256 -1.2532 -0.4002 12 6 8.5331 -2.5191 1.3476 13 6 7.7792 -3.7532 0.8245 14 1 6.7123 -3.7416 1.0473 15 6 8.4378 -5.0602 1.1839 16 6 9.8164 -5.1635 1.1775 17 6 10.4217 -6.3600 1.5123 18 6 9.6466 -7.4584 1.8438 19 9 10.2370 -8.6300 2.1659 20 6 8.2658 -7.3552 1.8443 21 6 7.6629 -6.1562 1.5145 22 6 8.1179 -3.2619 -0.5928 23 6 5.4945 2.2897 0.0019 24 6 4.0554 2.5510 0.0011 25 6 3.2766 3.7115 -0.0042 26 6 3.9382 5.0656 -0.0098 27 8 4.4564 5.3372 -1.3136 28 14 2.6881 6.3696 0.4455 29 6 1.9137 3.6151 0.0006 30 6 1.2958 2.3726 -0.0005 31 1 -0.3634 -1.0277 -0.0005 32 1 -0.3633 0.5139 0.8899 33 1 -0.3633 0.5138 -0.8901 34 1 6.0943 -1.6239 0.0012 35 1 9.5984 -2.6912 1.5017 36 1 8.0521 -2.0435 2.2021 37 1 10.4207 -4.3079 0.9146 38 1 11.4988 -6.4394 1.5113 39 1 7.6602 -8.2114 2.1023 40 1 6.5860 -6.0753 1.5153 41 1 7.3017 -3.3858 -1.3046 42 1 9.0697 -3.6370 -0.9691 43 1 6.2875 3.0229 0.0024 44 1 4.7530 5.0749 0.7143 45 1 3.7854 5.3446 -2.0098 46 1 2.1183 6.0808 1.7862 47 1 3.3279 7.7096 0.4430 48 1 1.3128 4.5125 0.0002 49 1 0.2174 2.3119 -0.0005 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10466350_6672420.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:11:00 Heat of formation + Delta-G solvation = -54.212324 kcal Electronic energy + Delta-G solvation = -35757.432090 eV Core-core repulsion = 30726.713634 eV Total energy + Delta-G solvation = -5030.718456 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 398.141 amu Computer time = 1.42 seconds Orbital eigenvalues (eV) -49.78650 -43.69380 -41.66766 -40.77817 -40.14382 -39.11024 -38.69667 -37.02742 -34.68956 -33.58740 -32.18123 -31.99410 -31.53314 -30.81036 -28.74572 -26.87084 -26.62612 -26.19851 -24.91414 -24.05752 -23.97112 -22.66153 -22.09362 -21.69326 -20.32360 -19.84473 -19.04018 -18.73296 -18.56441 -17.79652 -17.69340 -17.50593 -17.17057 -16.98465 -16.73586 -16.65165 -16.49362 -16.23353 -15.92363 -15.79348 -15.75878 -15.44628 -15.10792 -14.67129 -14.63968 -14.55898 -14.39485 -14.23095 -14.09990 -13.96325 -13.78081 -13.61439 -13.58483 -13.43397 -13.37953 -12.98361 -12.58550 -12.40286 -12.32069 -12.10779 -11.95847 -11.91859 -11.80661 -11.44821 -11.36600 -10.96579 -10.47941 -10.28803 -10.11554 -9.79857 -9.49922 -9.01569 -5.10018 -0.61752 0.09085 0.10870 0.21863 0.68214 1.20103 1.27161 1.60114 1.87904 1.94120 2.01649 2.02189 2.38098 2.51271 3.18485 3.28157 3.31249 3.39365 3.50541 3.52277 3.56381 3.60382 3.71957 3.80439 3.81739 3.84126 3.90778 3.97905 4.04446 4.06064 4.06518 4.15361 4.22098 4.34486 4.41618 4.42947 4.43765 4.49905 4.58722 4.68559 4.76855 4.80516 4.85595 4.87260 4.90826 4.96106 5.00998 5.03925 5.14080 5.20175 5.22686 5.26871 5.36655 5.53191 5.60895 5.88308 6.12323 6.29727 6.54519 6.90145 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.311 6.311 3 C 0.150 3.850 4 C 0.047 3.953 5 O -0.174 6.174 6 C -0.024 4.024 7 C 0.606 3.394 8 O -0.506 6.506 9 N -0.700 5.700 10 C 0.117 3.883 11 H 0.111 0.889 12 C -0.144 4.144 13 C -0.074 4.074 14 H 0.100 0.900 15 C -0.082 4.082 16 C -0.088 4.088 17 C -0.150 4.150 18 C 0.094 3.906 19 F -0.140 7.140 20 C -0.151 4.151 21 C -0.086 4.086 22 C -0.135 4.135 23 C -0.103 4.103 24 C -0.083 4.083 25 C -0.098 4.098 26 C -0.066 4.066 27 O -0.535 6.535 28 Si 0.686 3.314 29 C -0.088 4.088 30 C -0.178 4.178 31 H 0.105 0.895 32 H 0.060 0.940 33 H 0.061 0.939 34 H 0.409 0.591 35 H 0.099 0.901 36 H 0.077 0.923 37 H 0.134 0.866 38 H 0.136 0.864 39 H 0.136 0.864 40 H 0.132 0.868 41 H 0.080 0.920 42 H 0.102 0.898 43 H 0.174 0.826 44 H 0.114 0.886 45 H 0.379 0.621 46 H -0.255 1.255 47 H -0.252 1.252 48 H 0.141 0.859 49 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.428 0.356 -1.873 7.669 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 O -0.224 6.224 3 C 0.104 3.896 4 C -0.002 4.002 5 O -0.076 6.076 6 C -0.075 4.075 7 C 0.391 3.609 8 O -0.382 6.382 9 N -0.351 5.351 10 C 0.012 3.988 11 H 0.129 0.871 12 C -0.182 4.182 13 C -0.092 4.092 14 H 0.119 0.881 15 C -0.082 4.082 16 C -0.106 4.106 17 C -0.169 4.169 18 C 0.075 3.925 19 F -0.118 7.118 20 C -0.170 4.170 21 C -0.104 4.104 22 C -0.173 4.173 23 C -0.124 4.124 24 C -0.084 4.084 25 C -0.099 4.099 26 C -0.177 4.177 27 O -0.341 6.341 28 Si 0.587 3.413 29 C -0.105 4.105 30 C -0.197 4.197 31 H 0.124 0.876 32 H 0.079 0.921 33 H 0.080 0.920 34 H 0.245 0.755 35 H 0.117 0.883 36 H 0.096 0.904 37 H 0.152 0.848 38 H 0.154 0.846 39 H 0.153 0.847 40 H 0.150 0.850 41 H 0.098 0.902 42 H 0.120 0.880 43 H 0.192 0.808 44 H 0.131 0.869 45 H 0.226 0.774 46 H -0.179 1.179 47 H -0.177 1.177 48 H 0.158 0.842 49 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges -6.260 0.915 -0.959 6.399 hybrid contribution -0.173 -0.899 0.348 0.979 sum -6.433 0.016 -0.611 6.462 Atomic orbital electron populations 1.23197 0.77276 1.04781 1.01821 1.86172 1.22186 1.25660 1.88376 1.17733 0.86477 0.85905 0.99472 1.18779 0.87459 0.86945 1.07007 1.84045 1.12645 1.34719 1.76149 1.21930 0.83862 0.92573 1.09109 1.16588 0.85439 0.82052 0.76794 1.90926 1.30307 1.67397 1.49618 1.45564 1.09795 1.05564 1.74176 1.21953 0.86512 0.92846 0.97476 0.87094 1.23589 1.01704 0.95209 0.97732 1.21613 0.99890 0.90998 0.96714 0.88145 1.19738 0.93456 0.95108 0.99925 1.20890 0.94192 0.97077 0.98412 1.21187 1.00811 0.92444 1.02460 1.17782 0.91359 0.82009 1.01347 1.91521 1.84363 1.45711 1.90248 1.21192 0.92936 0.99695 1.03171 1.20941 1.00235 0.91510 0.97738 1.23447 1.03802 0.93918 0.96111 1.22758 0.94799 0.94334 1.00462 1.19407 0.92629 0.92096 1.04249 1.19492 0.92923 0.94466 1.03033 1.25065 1.05514 0.97798 0.89292 1.86544 1.38138 1.93421 1.15958 0.94997 0.83077 0.77828 0.85424 1.20396 0.93089 0.97278 0.99756 1.20985 1.00441 0.90517 1.07714 0.87640 0.92096 0.92015 0.75545 0.88285 0.90421 0.84809 0.84593 0.84651 0.84999 0.90154 0.87974 0.80827 0.86865 0.77413 1.17941 1.17656 0.84173 0.83355 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.08 9.81 101.05 0.99 0.91 16 2 O -0.31 -0.27 10.50 -19.61 -0.21 -0.48 16 3 C 0.15 0.18 6.70 -39.12 -0.26 -0.09 16 4 C 0.05 0.13 7.35 -38.24 -0.28 -0.15 16 5 O -0.17 -0.50 10.28 2.67 0.03 -0.47 16 6 C -0.02 -0.07 7.07 -36.91 -0.26 -0.33 16 7 C 0.61 1.66 7.80 -12.72 -0.10 1.56 16 8 O -0.51 -2.85 16.42 5.23 0.09 -2.76 16 9 N -0.70 0.09 5.26 -54.23 -0.29 -0.19 16 10 C 0.12 -0.12 4.33 -67.11 -0.29 -0.41 16 11 H 0.11 0.01 7.46 -51.93 -0.39 -0.37 16 12 C -0.14 0.23 7.25 -25.92 -0.19 0.04 16 13 C -0.07 0.16 3.86 -90.96 -0.35 -0.19 16 14 H 0.10 -0.29 8.09 -51.93 -0.42 -0.71 16 15 C -0.08 0.07 5.29 -104.62 -0.55 -0.48 16 16 C -0.09 0.07 8.59 -39.59 -0.34 -0.27 16 17 C -0.15 -0.07 10.03 -39.51 -0.40 -0.47 16 18 C 0.09 0.17 7.30 -39.42 -0.29 -0.12 16 19 F -0.14 -0.47 17.27 2.25 0.04 -0.43 16 20 C -0.15 -0.08 10.03 -39.51 -0.40 -0.48 16 21 C -0.09 0.05 9.71 -39.59 -0.38 -0.33 16 22 C -0.13 0.34 7.29 -25.92 -0.19 0.15 16 23 C -0.10 -0.29 10.68 -37.23 -0.40 -0.69 16 24 C -0.08 -0.20 6.16 -105.21 -0.65 -0.84 16 25 C -0.10 -0.04 5.26 -104.63 -0.55 -0.59 16 26 C -0.07 0.01 2.71 36.01 0.10 0.11 16 27 O -0.54 -0.16 12.88 -35.23 -0.45 -0.61 16 28 Si 0.69 -1.10 29.92 -169.99 -5.09 -6.18 16 29 C -0.09 0.13 8.62 -39.97 -0.34 -0.21 16 30 C -0.18 0.23 9.03 -39.37 -0.36 -0.13 16 31 H 0.11 -0.47 8.14 -51.93 -0.42 -0.90 16 32 H 0.06 -0.26 7.66 -51.93 -0.40 -0.66 16 33 H 0.06 -0.28 7.66 -51.92 -0.40 -0.68 16 34 H 0.41 -0.69 8.42 -40.82 -0.34 -1.04 16 35 H 0.10 -0.22 6.32 -51.93 -0.33 -0.55 16 36 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 37 H 0.13 -0.35 6.67 -52.49 -0.35 -0.70 16 38 H 0.14 -0.11 8.06 -52.49 -0.42 -0.54 16 39 H 0.14 -0.10 8.06 -52.49 -0.42 -0.52 16 40 H 0.13 -0.32 8.05 -52.49 -0.42 -0.74 16 41 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 42 H 0.10 -0.30 7.71 -51.93 -0.40 -0.70 16 43 H 0.17 0.40 8.06 -52.49 -0.42 -0.02 16 44 H 0.11 0.06 7.96 -51.93 -0.41 -0.35 16 45 H 0.38 -1.42 8.70 45.56 0.40 -1.03 16 46 H -0.25 -0.20 7.11 56.52 0.40 0.20 16 47 H -0.25 -0.45 7.11 56.52 0.40 -0.05 16 48 H 0.14 -0.63 5.07 -52.49 -0.27 -0.89 16 49 H 0.15 -0.62 6.26 -52.49 -0.33 -0.95 16 LS Contribution 416.24 15.07 6.27 6.27 Total: 0.00 -9.26 416.24 -10.89 -20.15 By element: Atomic # 1 Polarization: -6.50 SS G_CDS: -5.79 Total: -12.30 kcal Atomic # 6 Polarization: 2.49 SS G_CDS: -5.49 Total: -3.00 kcal Atomic # 7 Polarization: 0.09 SS G_CDS: -0.29 Total: -0.19 kcal Atomic # 8 Polarization: -3.78 SS G_CDS: -0.55 Total: -4.32 kcal Atomic # 9 Polarization: -0.47 SS G_CDS: 0.04 Total: -0.43 kcal Atomic # 14 Polarization: -1.10 SS G_CDS: -5.09 Total: -6.18 kcal Total LS contribution 6.27 Total: 6.27 kcal Total: -9.26 -10.89 -20.15 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10466350_6672420.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -34.062 kcal (2) G-P(sol) polarization free energy of solvation -9.263 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -43.324 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.888 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.151 kcal (6) G-S(sol) free energy of system = (1) + (5) -54.212 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.42 seconds