Wall clock time and date at job start Sat Mar 6 2021 16:11:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 C 1.36772 * 125.79938 * 2 1 4 4 C 1.47263 * 126.94179 * 359.97438 * 3 2 1 5 5 O 1.21623 * 120.00126 * 0.02562 * 4 3 2 6 6 N 1.34777 * 119.99630 * 179.97438 * 4 3 2 7 7 C 1.46499 * 119.99665 * 179.72408 * 6 4 3 8 8 H 1.09002 * 112.85201 * 24.08188 * 7 6 4 9 9 C 1.53784 * 113.61491 * 155.28109 * 7 6 4 10 10 C 1.53777 * 87.08172 * 89.11442 * 9 7 6 11 11 H 1.08994 * 113.61502 * 270.88324 * 10 9 7 12 12 C 1.50707 * 113.61053 * 140.06685 * 10 9 7 13 13 C 1.38244 * 119.97502 * 299.72396 * 12 10 9 14 14 C 1.38198 * 120.02498 * 179.73069 * 13 12 10 15 15 C 1.38457 * 119.97494 * 0.56721 * 14 13 12 16 16 F 1.35093 * 120.03009 * 179.68497 * 15 14 13 17 17 C 1.38462 * 119.94482 * 359.70592 * 15 14 13 18 18 C 1.38193 * 119.97912 * 0.02562 * 17 15 14 19 19 C 1.53777 * 87.08146 * 25.43581 * 10 9 7 20 20 C 1.46685 * 106.11271 * 180.23888 * 3 2 1 21 21 C 1.34489 * 106.33391 * 359.56845 * 20 3 2 22 22 C 1.50698 * 125.56876 * 180.14761 * 21 20 3 23 23 O 1.42899 * 109.47271 * 300.35530 * 22 21 20 24 24 Si 1.86299 * 109.46815 * 180.35937 * 22 21 20 25 25 N 1.34655 * 125.80130 * 179.97438 * 2 1 3 26 26 H 1.09000 * 109.47139 * 90.00306 * 1 2 3 27 27 H 1.09000 * 109.47117 * 209.99938 * 1 2 3 28 28 H 1.09001 * 109.47363 * 329.99930 * 1 2 3 29 29 H 0.97001 * 120.00485 * 0.02562 * 6 4 3 30 30 H 1.08999 * 113.61037 * 203.66621 * 9 7 6 31 31 H 1.08999 * 113.61254 * 334.47782 * 9 7 6 32 32 H 1.08003 * 119.98563 * 359.97438 * 13 12 10 33 33 H 1.07998 * 120.00967 * 180.25655 * 14 13 12 34 34 H 1.08006 * 120.01050 * 179.97438 * 17 15 14 35 35 H 1.07997 * 119.99268 * 180.02562 * 18 17 15 36 36 H 1.08999 * 113.61239 * 220.01646 * 19 10 9 37 37 H 1.08999 * 113.61926 * 89.11880 * 19 10 9 38 38 H 1.08007 * 126.83138 * 179.73999 * 20 3 2 39 39 H 1.09004 * 109.47493 * 60.36421 * 22 21 20 40 40 H 0.96698 * 114.00051 * 180.02562 * 23 22 21 41 41 H 1.48505 * 110.00283 * 298.68003 * 24 22 21 42 42 H 1.48506 * 110.00164 * 60.00029 * 24 22 21 43 43 H 0.96992 * 124.85449 * 0.02562 * 25 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3070 1.1093 0.0000 4 6 1.8701 2.5156 -0.0005 5 8 0.6839 2.7839 -0.0006 6 7 2.7849 3.5054 0.0001 7 6 2.3503 4.9044 -0.0066 8 1 1.3472 5.0380 0.3985 9 6 3.3873 5.8745 0.5839 10 6 3.9684 5.9927 -0.8350 11 1 4.7341 5.2493 -1.0565 12 6 4.3892 7.3930 -1.2002 13 6 3.4577 8.4145 -1.2068 14 6 3.8435 9.7000 -1.5361 15 6 5.1611 9.9625 -1.8710 16 9 5.5381 11.2175 -2.1993 17 6 6.0919 8.9374 -1.8695 18 6 5.7050 7.6538 -1.5345 19 6 2.5718 5.6120 -1.3539 20 6 3.6881 0.6152 -0.0059 21 6 3.6095 -0.7274 0.0008 22 6 4.7820 -1.6741 0.0015 23 8 5.5765 -1.4493 -1.1648 24 14 4.1616 -3.4308 0.0010 25 7 2.2947 -1.0921 0.0005 26 1 -0.3633 -0.0001 -1.0277 27 1 -0.3633 -0.8900 0.5138 28 1 -0.3634 0.8900 0.5138 29 1 3.7310 3.2915 0.0005 30 1 2.9541 6.8025 0.9570 31 1 4.0657 5.4070 1.2975 32 1 2.4289 8.2085 -0.9506 33 1 3.1164 10.4986 -1.5372 34 1 7.1199 9.1409 -2.1310 35 1 6.4310 6.8542 -1.5328 36 1 2.5929 4.9323 -2.2057 37 1 1.9158 6.4683 -1.5105 38 1 4.5890 1.2110 -0.0114 39 1 5.3870 -1.5028 0.8919 40 1 6.3502 -2.0255 -1.2307 41 1 3.3602 -3.6868 1.2247 42 1 3.3352 -3.6773 -1.2081 43 1 1.9734 -2.0073 0.0005 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10466350_9865296.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:11:22 Heat of formation + Delta-G solvation = -13.479741 kcal Electronic energy + Delta-G solvation = -27054.771935 eV Core-core repulsion = 22982.436671 eV Total energy + Delta-G solvation = -4072.335264 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 331.137 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -49.91493 -42.60117 -41.40743 -39.99754 -38.54483 -37.64668 -34.56189 -32.98075 -32.33939 -32.11400 -31.13977 -29.03886 -26.67440 -26.43315 -25.34671 -24.14065 -23.54260 -22.46867 -21.55454 -20.85139 -20.06548 -18.75624 -18.54533 -18.16734 -17.51817 -17.24155 -17.00856 -16.62053 -16.57280 -16.30112 -15.80222 -15.51412 -15.49633 -15.20273 -14.93696 -14.58864 -14.56305 -14.46340 -14.21523 -14.14226 -13.92270 -13.84119 -13.59479 -13.54862 -13.39037 -12.94037 -12.88769 -12.51386 -12.18286 -12.12443 -11.83206 -11.64484 -11.20943 -10.99526 -10.38409 -10.19477 -10.06619 -9.89062 -9.47618 -9.24053 -5.11747 0.12753 0.27575 0.57382 1.07950 1.21771 1.55584 1.80220 1.82134 2.30499 2.43774 2.56705 3.30504 3.41073 3.48697 3.66857 3.68451 3.74118 3.83487 3.85026 3.96684 3.97637 4.03043 4.08583 4.22123 4.33393 4.40936 4.43036 4.46550 4.57409 4.65343 4.68052 4.79173 4.85989 4.91034 4.92736 5.03510 5.05791 5.06294 5.11428 5.18045 5.22849 5.29881 5.55037 5.60300 5.69137 5.75236 5.93034 6.19307 6.60347 6.90641 7.29442 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.096 4.096 2 C 0.109 3.891 3 C -0.260 4.260 4 C 0.592 3.408 5 O -0.584 6.584 6 N -0.697 5.697 7 C 0.116 3.884 8 H 0.087 0.913 9 C -0.124 4.124 10 C -0.063 4.063 11 H 0.113 0.887 12 C -0.081 4.081 13 C -0.091 4.091 14 C -0.159 4.159 15 C 0.065 3.935 16 F -0.155 7.155 17 C -0.159 4.159 18 C -0.088 4.088 19 C -0.144 4.144 20 C -0.129 4.129 21 C 0.000 4.000 22 C -0.045 4.045 23 O -0.561 6.561 24 Si 0.772 3.228 25 N -0.550 5.550 26 H 0.083 0.917 27 H 0.085 0.915 28 H 0.088 0.912 29 H 0.412 0.588 30 H 0.103 0.897 31 H 0.087 0.913 32 H 0.149 0.851 33 H 0.142 0.858 34 H 0.144 0.856 35 H 0.154 0.846 36 H 0.064 0.936 37 H 0.100 0.900 38 H 0.168 0.832 39 H 0.110 0.890 40 H 0.407 0.593 41 H -0.282 1.282 42 H -0.296 1.296 43 H 0.415 0.585 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.676 -6.871 2.292 9.202 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C -0.010 4.010 3 C -0.270 4.270 4 C 0.382 3.618 5 O -0.466 6.466 6 N -0.347 5.347 7 C 0.010 3.990 8 H 0.105 0.895 9 C -0.162 4.162 10 C -0.081 4.081 11 H 0.131 0.869 12 C -0.081 4.081 13 C -0.109 4.109 14 C -0.178 4.178 15 C 0.046 3.954 16 F -0.134 7.134 17 C -0.178 4.178 18 C -0.106 4.106 19 C -0.182 4.182 20 C -0.153 4.153 21 C -0.107 4.107 22 C -0.156 4.156 23 O -0.371 6.371 24 Si 0.676 3.324 25 N -0.151 5.151 26 H 0.101 0.899 27 H 0.104 0.896 28 H 0.107 0.893 29 H 0.249 0.751 30 H 0.122 0.878 31 H 0.106 0.894 32 H 0.167 0.833 33 H 0.160 0.840 34 H 0.162 0.838 35 H 0.172 0.828 36 H 0.083 0.917 37 H 0.118 0.882 38 H 0.185 0.815 39 H 0.128 0.872 40 H 0.259 0.741 41 H -0.208 1.208 42 H -0.223 1.223 43 H 0.254 0.746 Dipole moment (debyes) X Y Z Total from point charges 3.741 -6.841 2.185 8.097 hybrid contribution 0.126 0.504 -0.223 0.566 sum 3.868 -6.336 1.962 7.678 Atomic orbital electron populations 1.20616 0.86003 1.04668 1.04008 1.20653 0.94456 0.85579 1.00319 1.20237 0.94132 0.91812 1.20838 1.17480 0.85056 0.84680 0.74571 1.90724 1.18095 1.84859 1.52888 1.45317 1.09940 1.04703 1.74752 1.21851 0.99412 0.80146 0.97600 0.89510 1.23382 0.97330 0.99473 0.95997 1.21569 0.97135 0.92794 0.96586 0.86890 1.19955 0.93421 0.95659 0.99054 1.21117 1.00839 0.90941 0.97987 1.21357 0.94525 0.99323 1.02585 1.18110 0.94759 0.79533 1.03037 1.91469 1.92156 1.39309 1.90499 1.21391 1.00307 0.92873 1.03195 1.21220 0.96329 0.96074 0.96995 1.23578 0.96721 1.00696 0.97254 1.22017 0.95541 0.92787 1.04947 1.19835 0.83890 0.95270 1.11725 1.24096 0.92313 1.06809 0.92407 1.86446 1.43240 1.65503 1.41936 0.93560 0.85325 0.76985 0.76489 1.41837 1.05886 1.08426 1.58916 0.89875 0.89615 0.89325 0.75086 0.87850 0.89400 0.83336 0.83977 0.83796 0.82802 0.91729 0.88215 0.81493 0.87241 0.74086 1.20815 1.22273 0.74570 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -0.34 9.88 71.24 0.70 0.36 16 2 C 0.11 0.65 7.17 41.78 0.30 0.95 16 3 C -0.26 -1.81 6.29 -19.04 -0.12 -1.93 16 4 C 0.59 5.07 7.81 86.62 0.68 5.75 16 5 O -0.58 -8.82 14.41 -4.10 -0.06 -8.88 16 6 N -0.70 -1.02 5.26 -443.44 -2.33 -3.35 16 7 C 0.12 0.02 4.32 45.52 0.20 0.21 16 8 H 0.09 0.38 7.47 -2.39 -0.02 0.36 16 9 C -0.12 0.57 7.29 31.12 0.23 0.80 16 10 C -0.06 0.28 3.85 -11.01 -0.04 0.24 16 11 H 0.11 -0.77 8.09 -2.39 -0.02 -0.79 16 12 C -0.08 0.14 5.29 -19.86 -0.11 0.04 16 13 C -0.09 0.07 8.62 22.26 0.19 0.26 16 14 C -0.16 -0.35 10.03 22.31 0.22 -0.13 16 15 C 0.06 0.33 7.30 22.38 0.16 0.49 16 16 F -0.16 -1.34 17.27 44.97 0.78 -0.56 16 17 C -0.16 -0.27 10.03 22.31 0.22 -0.05 16 18 C -0.09 0.13 9.71 22.26 0.22 0.35 16 19 C -0.14 0.20 7.25 31.12 0.23 0.43 16 20 C -0.13 -0.37 10.43 23.62 0.25 -0.12 16 21 C 0.00 0.00 6.14 40.98 0.25 0.25 16 22 C -0.05 0.21 2.97 71.24 0.21 0.43 16 23 O -0.56 2.43 12.84 -148.98 -1.91 0.52 16 24 Si 0.77 -4.96 30.94 68.60 2.12 -2.83 16 25 N -0.55 -1.66 5.41 -171.07 -0.93 -2.58 16 26 H 0.08 0.25 8.14 -2.39 -0.02 0.23 16 27 H 0.09 -0.10 8.14 -2.39 -0.02 -0.12 16 28 H 0.09 0.66 6.47 -2.39 -0.02 0.65 16 29 H 0.41 -1.46 7.82 -92.71 -0.73 -2.19 16 30 H 0.10 -0.53 7.73 -2.39 -0.02 -0.55 16 31 H 0.09 -0.53 8.14 -2.39 -0.02 -0.55 16 32 H 0.15 -0.66 6.65 -2.91 -0.02 -0.67 16 33 H 0.14 -0.02 8.06 -2.91 -0.02 -0.05 16 34 H 0.14 -0.14 8.06 -2.91 -0.02 -0.17 16 35 H 0.15 -0.99 8.05 -2.91 -0.02 -1.01 16 36 H 0.06 0.09 8.14 -2.39 -0.02 0.07 16 37 H 0.10 -0.24 6.30 -2.39 -0.02 -0.26 16 38 H 0.17 -0.37 7.70 -2.91 -0.02 -0.39 16 39 H 0.11 -1.02 7.96 -2.38 -0.02 -1.04 16 40 H 0.41 -6.09 8.74 -74.06 -0.65 -6.74 16 41 H -0.28 0.45 7.11 99.48 0.71 1.15 16 42 H -0.30 -0.36 7.11 99.48 0.71 0.34 16 43 H 0.41 -0.13 6.70 -92.71 -0.62 -0.75 16 Total: 0.00 -22.41 363.10 0.59 -21.83 By element: Atomic # 1 Polarization: -11.60 SS G_CDS: -0.87 Total: -12.47 kcal Atomic # 6 Polarization: 4.54 SS G_CDS: 3.79 Total: 8.33 kcal Atomic # 7 Polarization: -2.67 SS G_CDS: -3.26 Total: -5.93 kcal Atomic # 8 Polarization: -6.39 SS G_CDS: -1.97 Total: -8.36 kcal Atomic # 9 Polarization: -1.34 SS G_CDS: 0.78 Total: -0.56 kcal Atomic # 14 Polarization: -4.96 SS G_CDS: 2.12 Total: -2.83 kcal Total: -22.41 0.59 -21.83 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10466350_9865296.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 8.349 kcal (2) G-P(sol) polarization free energy of solvation -22.415 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -14.066 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.586 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.829 kcal (6) G-S(sol) free energy of system = (1) + (5) -13.480 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds