Wall clock time and date at job start Sat Mar 6 2021 13:12:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53006 * 1 3 3 O 1.42899 * 109.46964 * 2 1 4 4 C 1.35905 * 117.00181 * 84.95390 * 3 2 1 5 5 C 1.38731 * 120.05327 * 174.27245 * 4 3 2 6 6 C 1.38146 * 119.94133 * 179.69878 * 5 4 3 7 7 C 1.38266 * 120.05546 * 0.59159 * 6 5 4 8 8 C 1.50699 * 119.94642 * 179.70191 * 7 6 5 9 9 O 1.42893 * 109.47137 * 244.98248 * 8 7 6 10 10 Si 1.86299 * 109.46954 * 4.98261 * 8 7 6 11 11 C 1.38271 * 120.11127 * 359.68490 * 7 6 5 12 12 C 1.38146 * 120.05336 * 0.02562 * 11 7 6 13 13 C 1.50695 * 109.47101 * 239.99704 * 2 1 3 14 14 O 1.21278 * 120.00004 * 115.00144 * 13 2 1 15 15 N 1.34778 * 120.00265 * 295.00099 * 13 2 1 16 16 C 1.46492 * 120.00315 * 179.97438 * 15 13 2 17 17 H 1.08999 * 112.84872 * 25.33642 * 16 15 13 18 18 C 1.53779 * 113.61574 * 156.52976 * 16 15 13 19 19 C 1.53776 * 87.08295 * 89.11598 * 18 16 15 20 20 H 1.08997 * 113.62137 * 270.88479 * 19 18 16 21 21 C 1.50702 * 113.61498 * 140.06525 * 19 18 16 22 22 C 1.38326 * 120.00764 * 120.00383 * 21 19 18 23 23 Cl 1.73602 * 120.01461 * 359.95241 * 22 21 19 24 24 C 1.38382 * 119.97565 * 179.97438 * 22 21 19 25 25 C 1.38189 * 119.98377 * 0.02562 * 24 22 21 26 26 C 1.38264 * 120.01453 * 359.97438 * 25 24 22 27 27 C 1.38226 * 120.02879 * 359.75271 * 26 25 24 28 28 C 1.53778 * 113.61699 * 254.13620 * 16 15 13 29 29 H 1.09010 * 109.46711 * 300.00153 * 1 2 3 30 30 H 1.08989 * 109.46748 * 59.99927 * 1 2 3 31 31 H 1.08998 * 109.46779 * 180.02562 * 1 2 3 32 32 H 1.09001 * 109.47238 * 119.99577 * 2 1 3 33 33 H 1.08002 * 120.02761 * 359.97438 * 5 4 3 34 34 H 1.07998 * 119.97072 * 180.32180 * 6 5 4 35 35 H 1.08995 * 109.47110 * 124.97825 * 8 7 6 36 36 H 0.96700 * 114.00467 * 59.99994 * 9 8 7 37 37 H 1.48503 * 110.00028 * 58.68008 * 10 8 7 38 38 H 1.48505 * 109.99970 * 179.97438 * 10 8 7 39 39 H 1.07992 * 119.97442 * 179.97438 * 11 7 6 40 40 H 1.08006 * 120.02705 * 179.97438 * 12 11 7 41 41 H 0.97011 * 119.99826 * 0.02562 * 15 13 2 42 42 H 1.09007 * 113.61654 * 203.66793 * 18 16 15 43 43 H 1.09005 * 113.61580 * 334.56997 * 18 16 15 44 44 H 1.07994 * 120.00698 * 180.02562 * 24 22 21 45 45 H 1.08003 * 119.99173 * 179.97438 * 25 24 22 46 46 H 1.08001 * 119.98746 * 179.97438 * 26 25 24 47 47 H 1.07996 * 119.99229 * 180.27533 * 27 26 25 48 48 H 1.09003 * 113.61215 * 25.43766 * 28 16 15 49 49 H 1.09005 * 113.61563 * 156.33493 * 28 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 8 2.0063 1.3473 0.0000 4 6 2.1116 1.9645 1.2062 5 6 2.6778 3.2281 1.2930 6 6 2.7779 3.8560 2.5195 7 6 2.3256 3.2211 3.6614 8 6 2.4422 3.9056 4.9990 9 8 3.3413 3.1718 5.8327 10 14 3.0911 5.6351 4.7570 11 6 1.7662 1.9594 3.5783 12 6 1.6583 1.3297 2.3534 13 6 2.0324 -0.7104 -1.2304 14 8 2.6530 -0.0980 -2.0733 15 7 1.7919 -2.0265 -1.3941 16 6 2.2797 -2.7170 -2.5904 17 1 3.1496 -2.2324 -3.0337 18 6 2.4498 -4.2335 -2.4001 19 6 0.9862 -4.3747 -2.8504 20 1 0.2695 -4.3141 -2.0314 21 6 0.7439 -5.5563 -3.7538 22 6 -0.1451 -6.5461 -3.3748 23 17 -0.9810 -6.4281 -1.8578 24 6 -0.3675 -7.6305 -4.2051 25 6 0.2989 -7.7244 -5.4120 26 6 1.1873 -6.7348 -5.7903 27 6 1.4057 -5.6485 -4.9640 28 6 1.1731 -3.0455 -3.6064 29 1 -0.3633 0.5139 0.8901 30 1 -0.3632 0.5138 -0.8899 31 1 -0.3633 -1.0277 0.0005 32 1 1.8934 -0.5138 0.8900 33 1 3.0358 3.7223 0.4020 34 1 3.2138 4.8418 2.5869 35 1 1.4612 3.9485 5.4719 36 1 4.2357 3.0934 5.4735 37 1 2.1813 6.3988 3.8656 38 1 3.2101 6.3211 6.0687 39 1 1.4140 1.4654 4.4717 40 1 1.2216 0.3440 2.2890 41 1 1.2952 -2.5163 -0.7200 42 1 3.1642 -4.6828 -3.0900 43 1 2.6181 -4.5274 -1.3640 44 1 -1.0617 -8.4033 -3.9099 45 1 0.1257 -8.5710 -6.0599 46 1 1.7082 -6.8088 -6.7335 47 1 2.0964 -4.8737 -5.2621 48 1 0.3115 -2.3809 -3.5436 49 1 1.5391 -3.1706 -4.6255 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10565092_10157680.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:12:29 Heat of formation + Delta-G solvation = -20.985523 kcal Electronic energy + Delta-G solvation = -32129.660771 eV Core-core repulsion = 27629.634174 eV Total energy + Delta-G solvation = -4500.026597 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 388.127 amu Computer time = 1.59 seconds Orbital eigenvalues (eV) -41.97039 -41.34902 -40.41386 -39.29620 -38.62034 -37.41225 -37.14379 -34.95249 -33.20412 -32.07721 -31.76454 -31.66815 -31.20485 -26.85575 -26.74536 -26.41345 -25.31168 -24.19168 -23.68407 -22.76816 -22.39833 -21.51938 -20.24367 -19.48021 -18.72282 -18.21609 -18.11720 -17.32409 -16.87230 -16.83885 -16.49123 -16.38123 -16.35459 -15.96514 -15.72933 -15.59854 -15.27340 -15.12653 -14.78529 -14.77251 -14.72827 -14.44134 -14.33570 -14.24059 -13.80938 -13.50097 -13.39785 -13.37795 -13.28717 -12.97634 -12.93682 -12.69448 -12.48035 -12.18331 -12.16458 -12.15764 -12.07261 -11.78648 -11.69871 -11.52585 -11.27700 -10.96333 -10.40860 -10.21309 -10.05183 -9.83767 -9.58425 -9.23725 -4.99595 0.18001 0.23762 0.28580 0.31570 1.16576 1.33229 1.36001 1.44781 1.63994 1.96636 2.45432 2.62741 2.64330 3.38575 3.39773 3.56831 3.58975 3.62529 3.65834 3.73209 3.79726 3.84882 3.86143 3.91883 3.94550 4.10390 4.16445 4.25943 4.34000 4.38878 4.39835 4.50381 4.54507 4.58878 4.62230 4.65608 4.71664 4.75188 4.80751 4.88665 4.97155 4.98463 5.00580 5.05095 5.09938 5.17640 5.28026 5.29647 5.38817 5.47637 5.49296 5.56304 5.66958 5.86467 6.23291 6.40699 6.78854 7.04762 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C 0.065 3.935 3 O -0.311 6.311 4 C 0.119 3.881 5 C -0.158 4.158 6 C -0.075 4.075 7 C -0.162 4.162 8 C -0.064 4.064 9 O -0.556 6.556 10 Si 0.766 3.234 11 C -0.058 4.058 12 C -0.208 4.208 13 C 0.521 3.479 14 O -0.564 6.564 15 N -0.693 5.693 16 C 0.118 3.882 17 H 0.090 0.910 18 C -0.121 4.121 19 C -0.076 4.076 20 H 0.107 0.893 21 C -0.070 4.070 22 C -0.049 4.049 23 Cl -0.074 7.074 24 C -0.122 4.122 25 C -0.118 4.118 26 C -0.117 4.117 27 C -0.112 4.112 28 C -0.139 4.139 29 H 0.084 0.916 30 H 0.060 0.940 31 H 0.107 0.893 32 H 0.126 0.874 33 H 0.137 0.863 34 H 0.150 0.850 35 H 0.107 0.893 36 H 0.395 0.605 37 H -0.288 1.288 38 H -0.299 1.299 39 H 0.138 0.862 40 H 0.153 0.847 41 H 0.418 0.582 42 H 0.106 0.894 43 H 0.088 0.912 44 H 0.138 0.862 45 H 0.148 0.852 46 H 0.148 0.852 47 H 0.147 0.853 48 H 0.068 0.932 49 H 0.102 0.898 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.584 -5.108 -0.526 5.168 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.230 4.230 2 C 0.006 3.994 3 O -0.224 6.224 4 C 0.074 3.926 5 C -0.177 4.177 6 C -0.092 4.092 7 C -0.162 4.162 8 C -0.175 4.175 9 O -0.364 6.364 10 Si 0.673 3.327 11 C -0.076 4.076 12 C -0.227 4.227 13 C 0.307 3.693 14 O -0.442 6.442 15 N -0.346 5.346 16 C 0.012 3.988 17 H 0.108 0.892 18 C -0.158 4.158 19 C -0.094 4.094 20 H 0.125 0.875 21 C -0.071 4.071 22 C -0.076 4.076 23 Cl -0.045 7.045 24 C -0.141 4.141 25 C -0.136 4.136 26 C -0.135 4.135 27 C -0.130 4.130 28 C -0.178 4.178 29 H 0.103 0.897 30 H 0.079 0.921 31 H 0.125 0.875 32 H 0.144 0.856 33 H 0.155 0.845 34 H 0.168 0.832 35 H 0.125 0.875 36 H 0.245 0.755 37 H -0.215 1.215 38 H -0.227 1.227 39 H 0.156 0.844 40 H 0.170 0.830 41 H 0.255 0.745 42 H 0.125 0.875 43 H 0.107 0.893 44 H 0.156 0.844 45 H 0.166 0.834 46 H 0.165 0.835 47 H 0.165 0.835 48 H 0.086 0.914 49 H 0.121 0.879 Dipole moment (debyes) X Y Z Total from point charges 0.326 -3.783 -0.712 3.863 hybrid contribution -1.106 -0.647 0.425 1.350 sum -0.780 -4.430 -0.287 4.507 Atomic orbital electron populations 1.22363 0.90766 1.05554 1.04339 1.22383 0.96969 0.82278 0.97806 1.86190 1.81432 1.26876 1.27903 1.19274 0.95858 0.93245 0.84203 1.20604 1.03778 0.94011 0.99312 1.20975 0.97746 0.99509 0.90980 1.20345 1.03609 0.96799 0.95469 1.25010 0.97142 1.05914 0.89402 1.86458 1.25413 1.77095 1.47420 0.93821 0.88336 0.72619 0.77946 1.20990 0.95421 0.93838 0.97325 1.21515 1.06612 1.02601 0.91932 1.20471 0.78908 0.82635 0.87323 1.90749 1.41331 1.66764 1.45339 1.45421 1.57336 1.08025 1.23813 1.21854 0.97595 0.93235 0.86087 0.89200 1.23361 0.95660 0.93039 1.03788 1.21745 0.98554 0.91424 0.97673 0.87530 1.19699 0.95933 0.95288 0.96137 1.21028 0.98936 0.98177 0.89418 1.98359 1.77215 1.97878 1.31073 1.21300 1.00878 0.97311 0.94569 1.21439 0.96193 1.00046 0.95884 1.21595 0.97693 0.93589 1.00575 1.21261 0.99749 0.99013 0.92950 1.23606 0.99122 0.95713 0.99343 0.89669 0.92124 0.87489 0.85640 0.84549 0.83246 0.87507 0.75529 1.21534 1.22744 0.84419 0.82953 0.74464 0.87515 0.89344 0.84373 0.83424 0.83470 0.83511 0.91356 0.87927 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 0.85 9.13 71.98 0.66 1.51 16 2 C 0.07 -0.05 2.64 29.85 0.08 0.03 16 3 O -0.31 -2.04 9.34 -73.49 -0.69 -2.72 16 4 C 0.12 0.46 6.60 22.50 0.15 0.61 16 5 C -0.16 -0.51 9.99 22.37 0.22 -0.29 16 6 C -0.07 0.00 8.66 22.25 0.19 0.19 16 7 C -0.16 -0.03 5.35 -19.85 -0.11 -0.14 16 8 C -0.06 0.04 2.80 71.24 0.20 0.24 16 9 O -0.56 0.03 12.83 -148.98 -1.91 -1.88 16 10 Si 0.77 -1.16 29.80 68.60 2.04 0.88 16 11 C -0.06 0.00 9.68 22.26 0.22 0.22 16 12 C -0.21 0.08 8.24 22.36 0.18 0.27 16 13 C 0.52 1.82 7.18 87.66 0.63 2.45 16 14 O -0.56 -7.99 16.13 15.97 0.26 -7.73 16 15 N -0.69 2.42 5.23 -440.07 -2.30 0.12 16 16 C 0.12 -0.30 4.29 45.52 0.20 -0.10 16 17 H 0.09 0.16 7.50 -2.39 -0.02 0.14 16 18 C -0.12 0.71 7.29 31.12 0.23 0.93 16 19 C -0.08 0.32 3.65 -10.92 -0.04 0.28 16 20 H 0.11 -0.48 6.57 -2.39 -0.02 -0.49 16 21 C -0.07 0.10 5.29 -19.84 -0.11 0.00 16 22 C -0.05 -0.03 6.31 22.32 0.14 0.11 16 23 Cl -0.07 -0.03 27.16 -2.72 -0.07 -0.10 16 24 C -0.12 0.05 9.83 22.29 0.22 0.27 16 25 C -0.12 0.30 10.05 22.26 0.22 0.53 16 26 C -0.12 0.40 10.05 22.27 0.22 0.62 16 27 C -0.11 0.35 8.63 22.27 0.19 0.54 16 28 C -0.14 0.44 7.27 31.21 0.23 0.66 16 29 H 0.08 -0.48 6.91 -2.38 -0.02 -0.50 16 30 H 0.06 -0.05 8.14 -2.39 -0.02 -0.07 16 31 H 0.11 -1.14 7.92 -2.39 -0.02 -1.16 16 32 H 0.13 -0.81 6.31 -2.39 -0.02 -0.82 16 33 H 0.14 0.34 8.06 -2.91 -0.02 0.32 16 34 H 0.15 -0.65 4.90 -2.91 -0.01 -0.66 16 35 H 0.11 0.03 7.96 -2.39 -0.02 0.01 16 36 H 0.39 -3.07 8.70 -74.06 -0.64 -3.72 16 37 H -0.29 -1.06 7.11 99.48 0.71 -0.35 16 38 H -0.30 -1.79 7.11 99.48 0.71 -1.08 16 39 H 0.14 -0.29 8.06 -2.91 -0.02 -0.32 16 40 H 0.15 -0.88 5.43 -2.91 -0.02 -0.90 16 41 H 0.42 -4.10 8.49 -92.70 -0.79 -4.88 16 42 H 0.11 -0.71 7.73 -2.38 -0.02 -0.72 16 43 H 0.09 -0.64 8.14 -2.38 -0.02 -0.66 16 44 H 0.14 -0.34 8.06 -2.91 -0.02 -0.36 16 45 H 0.15 -0.96 8.06 -2.91 -0.02 -0.98 16 46 H 0.15 -1.10 8.06 -2.91 -0.02 -1.12 16 47 H 0.15 -0.97 6.65 -2.91 -0.02 -0.99 16 48 H 0.07 -0.07 8.14 -2.39 -0.02 -0.09 16 49 H 0.10 -0.43 6.31 -2.38 -0.02 -0.45 16 Total: 0.00 -23.24 413.72 0.88 -22.37 By element: Atomic # 1 Polarization: -19.49 SS G_CDS: -0.38 Total: -19.86 kcal Atomic # 6 Polarization: 5.00 SS G_CDS: 3.93 Total: 8.93 kcal Atomic # 7 Polarization: 2.42 SS G_CDS: -2.30 Total: 0.12 kcal Atomic # 8 Polarization: -9.99 SS G_CDS: -2.34 Total: -12.33 kcal Atomic # 14 Polarization: -1.16 SS G_CDS: 2.04 Total: 0.88 kcal Atomic # 17 Polarization: -0.03 SS G_CDS: -0.07 Total: -0.10 kcal Total: -23.24 0.88 -22.37 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10565092_10157680.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 1.379 kcal (2) G-P(sol) polarization free energy of solvation -23.243 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -21.864 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.878 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.365 kcal (6) G-S(sol) free energy of system = (1) + (5) -20.986 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.59 seconds