Wall clock time and date at job start Sat Mar 6 2021 13:12:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86305 * 109.46645 * 2 1 4 4 C 1.50699 * 109.47152 * 119.99802 * 2 1 3 5 5 C 1.35451 * 126.06378 * 244.69077 * 4 2 1 6 6 N 1.35535 * 108.86948 * 179.89470 * 5 4 2 7 7 C 1.37650 * 108.64313 * 0.37461 * 6 5 4 8 8 C 1.46679 * 126.23479 * 179.77254 * 7 6 5 9 9 O 1.21696 * 120.00336 * 179.97438 * 8 7 6 10 10 N 1.34776 * 119.99876 * 0.02562 * 8 7 6 11 11 C 1.46497 * 120.00148 * 180.02562 * 10 8 7 12 12 H 1.08998 * 112.84866 * 336.19266 * 11 10 8 13 13 C 1.53782 * 113.61681 * 107.49872 * 11 10 8 14 14 C 1.53787 * 87.08092 * 89.11881 * 13 11 10 15 15 H 1.09004 * 113.61241 * 270.88360 * 14 13 11 16 16 C 1.50699 * 113.69232 * 139.99431 * 14 13 11 17 17 C 1.38330 * 120.00607 * 142.18796 * 16 14 13 18 18 Cl 1.73601 * 120.01419 * 359.97438 * 17 16 14 19 19 C 1.38374 * 119.97140 * 179.70101 * 17 16 14 20 20 C 1.38195 * 119.98737 * 0.59617 * 19 17 16 21 21 C 1.38265 * 120.00927 * 359.70420 * 20 19 17 22 22 C 1.38218 * 120.02823 * 359.97438 * 21 20 19 23 23 C 1.53777 * 87.08156 * 25.43309 * 14 13 11 24 24 C 1.37869 * 107.53310 * 359.76951 * 7 6 5 25 25 H 0.96700 * 114.00311 * 60.00382 * 1 2 3 26 26 H 1.08997 * 109.47332 * 240.00042 * 2 1 3 27 27 H 1.48497 * 110.00233 * 59.99845 * 3 2 1 28 28 H 1.48492 * 109.99800 * 181.32238 * 3 2 1 29 29 H 1.07997 * 125.56600 * 0.03944 * 5 4 2 30 30 H 0.97005 * 125.67544 * 180.11308 * 6 5 4 31 31 H 0.97001 * 119.99967 * 359.97438 * 10 8 7 32 32 H 1.09001 * 113.61903 * 203.66308 * 13 11 10 33 33 H 1.08999 * 113.61465 * 334.57120 * 13 11 10 34 34 H 1.07999 * 120.00555 * 180.27760 * 19 17 16 35 35 H 1.07996 * 119.99819 * 179.72493 * 20 19 17 36 36 H 1.08006 * 119.98201 * 180.02562 * 21 20 19 37 37 H 1.08005 * 119.99173 * 180.02562 * 22 21 20 38 38 H 1.09004 * 113.61377 * 220.02344 * 23 14 13 39 39 H 1.09004 * 113.61425 * 89.11528 * 23 14 13 40 40 H 1.08003 * 126.45890 * 179.97438 * 24 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7566 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 2.6385 -0.1510 2.2413 6 7 2.9066 -1.1030 3.1680 7 6 2.3695 -2.2963 2.7410 8 6 2.4380 -3.5800 3.4473 9 8 1.9202 -4.5693 2.9634 10 7 3.0735 -3.6637 4.6329 11 6 3.1424 -4.9459 5.3382 12 1 2.3404 -5.6279 5.0558 13 6 4.5389 -5.5894 5.3115 14 6 4.8391 -4.8043 6.5993 15 1 5.2517 -3.8116 6.4193 16 6 5.6255 -5.5891 7.6175 17 6 6.5978 -4.9608 8.3746 18 17 6.9131 -3.2683 8.1517 19 6 7.3152 -5.6807 9.3137 20 6 7.0684 -7.0295 9.4860 21 6 6.1007 -7.6582 8.7246 22 6 5.3792 -6.9382 7.7911 23 6 3.3233 -4.8037 6.8587 24 6 1.7555 -2.0652 1.5284 25 1 -0.3934 0.4416 -0.7651 26 1 1.7924 -0.5138 -0.8899 27 1 1.5613 2.4680 1.2084 28 1 3.5344 1.7705 -0.0322 29 1 2.9376 0.8851 2.3004 30 1 3.3986 -0.9669 3.9928 31 1 3.4860 -2.8751 5.0188 32 1 4.5244 -6.6702 5.4524 33 1 5.1458 -5.2806 4.4604 34 1 8.0714 -5.1897 9.9082 35 1 7.6313 -7.5925 10.2158 36 1 5.9079 -8.7123 8.8599 37 1 4.6230 -7.4298 7.1969 38 1 2.9489 -3.8605 7.2566 39 1 2.9765 -5.6697 7.4226 40 1 1.2368 -2.7934 0.9226 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10565092_10543058.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:12:33 Heat of formation + Delta-G solvation = 30.314399 kcal Electronic energy + Delta-G solvation = -24960.235797 eV Core-core repulsion = 21154.991391 eV Total energy + Delta-G solvation = -3805.244406 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 333.092 amu Computer time = 0.95 seconds Orbital eigenvalues (eV) -42.65411 -41.54618 -40.23821 -38.84564 -37.58502 -37.46782 -34.89392 -32.82871 -31.90737 -31.71034 -30.76189 -26.94780 -26.81285 -26.09346 -24.48734 -23.63636 -22.63039 -21.44768 -20.83830 -20.39286 -19.67084 -18.37392 -18.26552 -17.42010 -17.09621 -16.68201 -16.52110 -16.34485 -15.72513 -15.33250 -15.20739 -15.11486 -14.97471 -14.81174 -14.73244 -14.56639 -14.37239 -14.11029 -13.60016 -13.45903 -13.43937 -13.01688 -12.75832 -12.53334 -12.48721 -12.21323 -11.95339 -11.85927 -11.62207 -11.42271 -11.33803 -10.36384 -10.30381 -9.99610 -9.88119 -9.63283 -9.46047 -4.87848 0.13467 0.19513 0.24674 1.11258 1.29920 1.42417 1.75647 1.77837 1.94212 2.03973 2.12203 2.58721 3.31918 3.52388 3.54923 3.60294 3.68759 3.79789 3.86067 3.89072 4.02922 4.04734 4.11486 4.20171 4.34456 4.35660 4.52058 4.60547 4.66414 4.69953 4.72676 4.78162 4.80477 4.87345 4.90669 4.95628 5.02111 5.25462 5.31647 5.42976 5.45549 5.50101 5.59204 5.82675 6.16673 6.34284 6.92407 7.01395 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.571 6.571 2 C -0.056 4.056 3 Si 0.786 3.214 4 C -0.188 4.188 5 C 0.033 3.967 6 N -0.516 5.516 7 C -0.064 4.064 8 C 0.595 3.405 9 O -0.566 6.566 10 N -0.699 5.699 11 C 0.116 3.884 12 H 0.095 0.905 13 C -0.138 4.138 14 C -0.076 4.076 15 H 0.103 0.897 16 C -0.071 4.071 17 C -0.050 4.050 18 Cl -0.076 7.076 19 C -0.121 4.121 20 C -0.117 4.117 21 C -0.115 4.115 22 C -0.111 4.111 23 C -0.121 4.121 24 C -0.099 4.099 25 H 0.400 0.600 26 H 0.079 0.921 27 H -0.289 1.289 28 H -0.283 1.283 29 H 0.188 0.812 30 H 0.435 0.565 31 H 0.409 0.591 32 H 0.107 0.893 33 H 0.066 0.934 34 H 0.139 0.861 35 H 0.150 0.850 36 H 0.149 0.851 37 H 0.148 0.852 38 H 0.084 0.916 39 H 0.110 0.890 40 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.352 2.709 1.192 3.780 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.380 6.380 2 C -0.166 4.166 3 Si 0.690 3.310 4 C -0.194 4.194 5 C -0.105 4.105 6 N -0.114 5.114 7 C -0.178 4.178 8 C 0.383 3.617 9 O -0.444 6.444 10 N -0.350 5.350 11 C 0.011 3.989 12 H 0.114 0.886 13 C -0.176 4.176 14 C -0.094 4.094 15 H 0.121 0.879 16 C -0.071 4.071 17 C -0.077 4.077 18 Cl -0.047 7.047 19 C -0.140 4.140 20 C -0.135 4.135 21 C -0.133 4.133 22 C -0.129 4.129 23 C -0.159 4.159 24 C -0.126 4.126 25 H 0.250 0.750 26 H 0.097 0.903 27 H -0.216 1.216 28 H -0.210 1.210 29 H 0.205 0.795 30 H 0.276 0.724 31 H 0.245 0.755 32 H 0.125 0.875 33 H 0.085 0.915 34 H 0.157 0.843 35 H 0.167 0.833 36 H 0.167 0.833 37 H 0.166 0.834 38 H 0.103 0.897 39 H 0.128 0.872 40 H 0.155 0.845 Dipole moment (debyes) X Y Z Total from point charges 2.664 2.389 1.987 4.093 hybrid contribution 0.601 -0.022 0.711 0.931 sum 3.265 2.367 2.698 4.852 Atomic orbital electron populations 1.86463 1.18077 1.82484 1.51004 1.24375 0.85137 1.11319 0.95747 0.93850 0.77407 0.74327 0.85409 1.19233 1.06948 0.94139 0.99125 1.22021 1.03115 0.95098 0.90223 1.41796 1.43180 1.06681 1.19725 1.20251 1.11382 0.86576 0.99547 1.17096 0.77629 0.86236 0.80709 1.90847 1.48398 1.37545 1.67645 1.45413 1.56444 1.12604 1.20494 1.21913 0.98756 0.85272 0.92982 0.88644 1.23564 0.95936 1.01219 0.96910 1.21678 0.94901 0.99278 0.93554 0.87917 1.19677 0.95756 0.94646 0.97062 1.21034 1.00298 0.85468 1.00860 1.98356 1.94989 1.14935 1.96462 1.21302 0.99977 0.95056 0.97666 1.21456 0.98270 0.93711 1.00025 1.21607 0.95190 1.01488 0.95033 1.21265 1.00423 0.92511 0.98725 1.23382 0.93810 1.04684 0.94026 1.21290 1.00050 0.96283 0.94984 0.74976 0.90302 1.21602 1.21006 0.79506 0.72360 0.75516 0.87489 0.91542 0.84323 0.83277 0.83302 0.83410 0.89739 0.87190 0.84480 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.57 -1.43 12.86 -148.98 -1.92 -3.34 16 2 C -0.06 -0.06 3.01 71.24 0.21 0.15 16 3 Si 0.79 -2.90 30.60 68.60 2.10 -0.80 16 4 C -0.19 -1.12 5.46 -20.12 -0.11 -1.23 16 5 C 0.03 0.05 10.45 83.48 0.87 0.93 16 6 N -0.52 0.31 5.99 -183.63 -1.10 -0.79 16 7 C -0.06 -0.41 7.06 40.35 0.28 -0.12 16 8 C 0.59 4.65 7.79 86.45 0.67 5.32 16 9 O -0.57 -9.21 16.48 -4.34 -0.07 -9.28 16 10 N -0.70 -0.03 5.26 -443.99 -2.33 -2.36 16 11 C 0.12 -0.05 4.33 45.52 0.20 0.14 16 12 H 0.10 0.31 7.46 -2.39 -0.02 0.29 16 13 C -0.14 0.23 7.26 31.12 0.23 0.45 16 14 C -0.08 0.20 3.64 -11.01 -0.04 0.16 16 15 H 0.10 -0.27 6.57 -2.39 -0.02 -0.29 16 16 C -0.07 0.03 5.29 -19.84 -0.11 -0.07 16 17 C -0.05 -0.07 6.31 22.32 0.14 0.07 16 18 Cl -0.08 -0.11 27.15 -2.72 -0.07 -0.18 16 19 C -0.12 -0.02 9.83 22.29 0.22 0.20 16 20 C -0.12 0.26 10.05 22.27 0.22 0.48 16 21 C -0.12 0.35 10.05 22.27 0.22 0.58 16 22 C -0.11 0.27 8.61 22.26 0.19 0.47 16 23 C -0.12 0.50 7.29 31.12 0.23 0.73 16 24 C -0.10 -0.96 10.59 22.57 0.24 -0.72 16 25 H 0.40 -3.35 8.74 -74.06 -0.65 -3.99 16 26 H 0.08 -0.10 7.96 -2.39 -0.02 -0.12 16 27 H -0.29 -0.63 7.11 99.48 0.71 0.08 16 28 H -0.28 -0.19 7.11 99.48 0.71 0.52 16 29 H 0.19 -0.56 6.20 -2.91 -0.02 -0.58 16 30 H 0.44 -3.63 8.19 -92.70 -0.76 -4.39 16 31 H 0.41 -2.40 7.83 -92.71 -0.73 -3.12 16 32 H 0.11 -0.37 6.32 -2.39 -0.02 -0.38 16 33 H 0.07 0.05 8.14 -2.39 -0.02 0.03 16 34 H 0.14 -0.27 8.06 -2.91 -0.02 -0.29 16 35 H 0.15 -0.94 8.06 -2.91 -0.02 -0.96 16 36 H 0.15 -1.08 8.06 -2.91 -0.02 -1.10 16 37 H 0.15 -0.90 6.67 -2.91 -0.02 -0.92 16 38 H 0.08 -0.42 8.14 -2.39 -0.02 -0.44 16 39 H 0.11 -0.59 7.72 -2.38 -0.02 -0.61 16 40 H 0.14 1.60 8.06 -2.91 -0.02 1.58 16 Total: 0.00 -23.23 351.75 -0.69 -23.92 By element: Atomic # 1 Polarization: -13.72 SS G_CDS: -0.97 Total: -14.70 kcal Atomic # 6 Polarization: 3.87 SS G_CDS: 3.68 Total: 7.55 kcal Atomic # 7 Polarization: 0.28 SS G_CDS: -3.44 Total: -3.16 kcal Atomic # 8 Polarization: -10.64 SS G_CDS: -1.99 Total: -12.63 kcal Atomic # 14 Polarization: -2.90 SS G_CDS: 2.10 Total: -0.80 kcal Atomic # 17 Polarization: -0.11 SS G_CDS: -0.07 Total: -0.18 kcal Total: -23.23 -0.69 -23.92 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10565092_10543058.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 54.236 kcal (2) G-P(sol) polarization free energy of solvation -23.227 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 31.008 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.694 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.921 kcal (6) G-S(sol) free energy of system = (1) + (5) 30.314 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.95 seconds