Wall clock time and date at job start Sat Mar 6 2021 13:12:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46503 * 1 3 3 C 1.35533 * 125.67669 * 2 1 4 4 C 1.35454 * 108.86923 * 179.97438 * 3 2 1 5 5 C 1.50701 * 126.06495 * 179.97438 * 4 3 2 6 6 O 1.42897 * 109.47295 * 244.97485 * 5 4 3 7 7 Si 1.86303 * 109.47374 * 4.97717 * 5 4 3 8 8 C 1.39835 * 107.86603 * 359.74024 * 4 3 2 9 9 C 1.37644 * 125.67804 * 179.97438 * 2 1 3 10 10 C 1.46685 * 126.23407 * 0.02562 * 9 2 1 11 11 O 1.21692 * 119.99814 * 4.99301 * 10 9 2 12 12 N 1.34772 * 119.99948 * 184.98750 * 10 9 2 13 13 C 1.46504 * 119.99651 * 174.29039 * 12 10 9 14 14 H 1.08989 * 112.85206 * 23.79770 * 13 12 10 15 15 C 1.53778 * 113.61569 * 155.00354 * 13 12 10 16 16 C 1.53783 * 87.08652 * 89.19308 * 15 13 12 17 17 H 1.08997 * 113.61312 * 270.80348 * 16 15 13 18 18 C 1.50694 * 113.61596 * 139.98132 * 16 15 13 19 19 C 1.38328 * 120.00628 * 119.99963 * 18 16 15 20 20 Cl 1.73595 * 120.01549 * 359.70623 * 19 18 16 21 21 C 1.38378 * 119.97133 * 179.72474 * 19 18 16 22 22 C 1.38193 * 119.98736 * 0.02562 * 21 19 18 23 23 C 1.38257 * 120.01204 * 0.02562 * 22 21 19 24 24 C 1.38219 * 120.03128 * 359.97438 * 23 22 21 25 25 C 1.53780 * 87.07633 * 25.43431 * 16 15 13 26 26 H 1.09000 * 109.46759 * 264.32414 * 1 2 3 27 27 H 1.09004 * 109.47078 * 24.32026 * 1 2 3 28 28 H 1.08996 * 109.47066 * 144.32296 * 1 2 3 29 29 H 1.07995 * 125.56612 * 359.95750 * 3 2 1 30 30 H 1.09005 * 109.46711 * 124.97333 * 5 4 3 31 31 H 0.96697 * 114.00220 * 180.02562 * 6 5 4 32 32 H 1.48494 * 109.99953 * 178.67840 * 7 5 4 33 33 H 1.48496 * 109.99854 * 299.99998 * 7 5 4 34 34 H 1.07999 * 126.45942 * 180.26385 * 8 4 3 35 35 H 0.96998 * 120.00429 * 354.28578 * 12 10 9 36 36 H 1.09011 * 113.61368 * 334.64525 * 15 13 12 37 37 H 1.08994 * 113.61769 * 203.74741 * 15 13 12 38 38 H 1.07999 * 120.00480 * 179.97438 * 21 19 18 39 39 H 1.08004 * 119.99318 * 179.97438 * 22 21 19 40 40 H 1.08009 * 119.98729 * 180.02562 * 23 22 21 41 41 H 1.08001 * 119.99804 * 180.02562 * 24 23 22 42 42 H 1.09002 * 113.61753 * 89.11751 * 25 16 15 43 43 H 1.09007 * 113.61396 * 220.01776 * 25 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2555 1.1010 0.0000 4 6 3.5522 0.7093 0.0006 5 6 4.7537 1.6189 0.0002 6 8 5.4778 1.4512 -1.2202 7 14 4.1927 3.3890 0.1513 8 6 3.5780 -0.6888 0.0070 9 6 2.2678 -1.1181 0.0005 10 6 1.8124 -2.5125 0.0006 11 8 0.6255 -2.7649 -0.0915 12 7 2.7084 -3.5140 0.1026 13 6 2.2477 -4.8990 0.2287 14 1 1.2458 -5.0500 -0.1730 15 6 3.2713 -5.9359 -0.2629 16 6 3.8368 -5.9397 1.1672 17 1 4.6156 -5.1949 1.3307 18 6 4.2252 -7.3101 1.6591 19 6 5.5330 -7.5673 2.0294 20 17 6.7289 -6.3137 1.9204 21 6 5.8876 -8.8243 2.4864 22 6 4.9354 -9.8222 2.5721 23 6 3.6287 -9.5648 2.2008 24 6 3.2738 -8.3094 1.7442 25 6 2.4429 -5.4894 1.6352 26 1 -0.3633 -0.1016 1.0226 27 1 -0.3633 0.9365 -0.4232 28 1 -0.3633 -0.8348 -0.5993 29 1 1.9082 2.1236 -0.0007 30 1 5.3987 1.3691 0.8427 31 1 6.2660 2.0070 -1.2895 32 1 5.3697 4.2938 0.1842 33 1 3.3124 3.7420 -0.9914 34 1 4.4583 -1.3144 0.0130 35 1 3.6583 -3.3179 0.0924 36 1 3.9663 -5.5450 -1.0062 37 1 2.8241 -6.8850 -0.5582 38 1 6.9086 -9.0258 2.7753 39 1 5.2122 -10.8034 2.9284 40 1 2.8847 -10.3449 2.2683 41 1 2.2528 -8.1089 1.4547 42 1 1.7691 -6.3164 1.8590 43 1 2.4690 -4.7379 2.4244 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10565092_10803934.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:12:36 Heat of formation + Delta-G solvation = 38.101949 kcal Electronic energy + Delta-G solvation = -27228.513025 eV Core-core repulsion = 23268.068694 eV Total energy + Delta-G solvation = -3960.444331 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 347.108 amu Computer time = 1.15 seconds Orbital eigenvalues (eV) -42.58269 -41.47571 -40.13476 -38.75568 -37.77741 -37.40807 -34.95972 -33.85832 -32.03046 -31.66343 -30.67231 -28.38369 -26.74360 -26.42056 -25.61640 -24.19698 -23.51350 -22.53340 -21.21515 -20.62726 -19.97263 -18.77920 -18.40699 -18.22045 -17.29836 -16.93051 -16.71026 -16.58582 -16.34000 -15.77366 -15.61671 -15.34254 -15.12243 -14.93714 -14.76892 -14.75393 -14.51764 -14.34929 -14.03141 -13.58873 -13.53473 -13.39473 -13.23411 -13.13549 -12.95403 -12.68428 -12.51442 -12.47570 -12.15280 -11.93911 -11.77783 -11.52873 -11.28417 -11.17349 -10.35967 -10.20979 -9.83317 -9.70567 -9.58135 -9.28407 -4.87129 0.18441 0.29138 0.36844 1.17516 1.35587 1.52080 1.54273 1.67311 2.01908 2.23966 2.26931 2.63456 3.39505 3.53843 3.59397 3.61044 3.71442 3.86124 3.92998 3.94872 3.98703 4.10645 4.14251 4.17312 4.36756 4.39300 4.39678 4.40620 4.60339 4.62259 4.70649 4.71782 4.75066 4.76431 4.81865 4.89500 4.97696 5.01199 5.10833 5.17796 5.30393 5.40366 5.49568 5.55924 5.65871 5.86960 5.87244 6.13830 6.40672 6.70494 7.06625 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.064 3.936 2 N -0.412 5.412 3 C 0.034 3.966 4 C -0.182 4.182 5 C -0.050 4.050 6 O -0.561 6.561 7 Si 0.765 3.235 8 C -0.113 4.113 9 C -0.078 4.078 10 C 0.592 3.408 11 O -0.579 6.579 12 N -0.692 5.692 13 C 0.120 3.880 14 H 0.096 0.904 15 C -0.124 4.124 16 C -0.076 4.076 17 H 0.102 0.898 18 C -0.070 4.070 19 C -0.051 4.051 20 Cl -0.076 7.076 21 C -0.122 4.122 22 C -0.117 4.117 23 C -0.116 4.116 24 C -0.111 4.111 25 C -0.136 4.136 26 H 0.086 0.914 27 H 0.112 0.888 28 H 0.083 0.917 29 H 0.198 0.802 30 H 0.088 0.912 31 H 0.391 0.609 32 H -0.290 1.290 33 H -0.294 1.294 34 H 0.156 0.844 35 H 0.413 0.587 36 H 0.081 0.919 37 H 0.109 0.891 38 H 0.138 0.862 39 H 0.149 0.851 40 H 0.149 0.851 41 H 0.149 0.851 42 H 0.107 0.893 43 H 0.067 0.933 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.002 -0.499 3.206 3.245 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 N -0.084 5.084 3 C -0.103 4.103 4 C -0.188 4.188 5 C -0.159 4.159 6 O -0.371 6.371 7 Si 0.670 3.330 8 C -0.140 4.140 9 C -0.191 4.191 10 C 0.382 3.618 11 O -0.460 6.460 12 N -0.343 5.343 13 C 0.014 3.986 14 H 0.114 0.886 15 C -0.161 4.161 16 C -0.095 4.095 17 H 0.120 0.880 18 C -0.071 4.071 19 C -0.077 4.077 20 Cl -0.047 7.047 21 C -0.140 4.140 22 C -0.135 4.135 23 C -0.133 4.133 24 C -0.129 4.129 25 C -0.174 4.174 26 H 0.105 0.895 27 H 0.131 0.869 28 H 0.101 0.899 29 H 0.214 0.786 30 H 0.106 0.894 31 H 0.241 0.759 32 H -0.217 1.217 33 H -0.222 1.222 34 H 0.173 0.827 35 H 0.250 0.750 36 H 0.100 0.900 37 H 0.128 0.872 38 H 0.156 0.844 39 H 0.167 0.833 40 H 0.167 0.833 41 H 0.167 0.833 42 H 0.126 0.874 43 H 0.086 0.914 Dipole moment (debyes) X Y Z Total from point charges -1.624 -0.261 2.681 3.145 hybrid contribution 1.799 0.067 -0.744 1.947 sum 0.174 -0.194 1.937 1.955 Atomic orbital electron populations 1.22416 0.74607 1.05757 1.04827 1.43998 1.07726 1.04659 1.51995 1.22243 0.89838 0.92494 1.05752 1.18893 0.93026 0.94028 1.12830 1.24279 0.93543 1.09376 0.88672 1.86564 1.43735 1.67346 1.39411 0.94365 0.80684 0.71607 0.86364 1.21417 0.94426 0.95158 1.02982 1.20045 0.90850 0.87653 1.20564 1.17103 0.85310 0.84094 0.75317 1.90774 1.17562 1.85284 1.52430 1.45235 1.09951 1.05396 1.73672 1.21864 0.99406 0.79829 0.97467 0.88595 1.23385 0.97539 0.99515 0.95710 1.21674 0.97750 0.93290 0.96760 0.88001 1.19698 0.91400 0.96709 0.99251 1.21052 0.90432 0.90848 1.05383 1.98362 1.56470 1.52956 1.96927 1.21297 1.01398 0.91486 0.99843 1.21445 0.93013 0.99735 0.99339 1.21599 0.96939 0.97446 0.97361 1.21263 0.99921 0.92359 0.99346 1.23559 0.96043 1.01144 0.96693 0.89539 0.86924 0.89851 0.78572 0.89408 0.75882 1.21737 1.22181 0.82666 0.75028 0.90046 0.87235 0.84376 0.83320 0.83300 0.83344 0.87439 0.91390 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.00 10.48 127.77 1.34 1.34 16 2 N -0.41 -1.65 3.16 -534.30 -1.69 -3.34 16 3 C 0.03 0.05 9.92 83.48 0.83 0.88 16 4 C -0.18 -0.57 5.46 -20.12 -0.11 -0.68 16 5 C -0.05 0.01 3.01 71.24 0.21 0.22 16 6 O -0.56 -1.68 12.86 -148.98 -1.92 -3.60 16 7 Si 0.76 -1.96 30.60 68.60 2.10 0.14 16 8 C -0.11 -0.45 10.29 22.57 0.23 -0.22 16 9 C -0.08 -0.48 6.89 40.35 0.28 -0.20 16 10 C 0.59 4.35 7.77 86.45 0.67 5.02 16 11 O -0.58 -7.51 14.36 -4.32 -0.06 -7.58 16 12 N -0.69 -1.05 5.25 -444.00 -2.33 -3.38 16 13 C 0.12 0.00 4.36 45.52 0.20 0.19 16 14 H 0.10 0.29 7.41 -2.39 -0.02 0.27 16 15 C -0.12 0.37 7.29 31.12 0.23 0.59 16 16 C -0.08 0.13 3.64 -11.02 -0.04 0.09 16 17 H 0.10 -0.09 6.57 -2.39 -0.02 -0.10 16 18 C -0.07 -0.01 5.29 -19.84 -0.10 -0.12 16 19 C -0.05 -0.11 6.31 22.32 0.14 0.03 16 20 Cl -0.08 -0.21 27.16 -2.72 -0.07 -0.28 16 21 C -0.12 -0.09 9.83 22.29 0.22 0.13 16 22 C -0.12 0.21 10.05 22.26 0.22 0.44 16 23 C -0.12 0.33 10.05 22.27 0.22 0.55 16 24 C -0.11 0.24 8.62 22.27 0.19 0.44 16 25 C -0.14 0.21 7.25 31.12 0.23 0.44 16 26 H 0.09 -0.12 8.14 -2.39 -0.02 -0.14 16 27 H 0.11 -0.65 8.12 -2.38 -0.02 -0.67 16 28 H 0.08 0.36 6.55 -2.39 -0.02 0.35 16 29 H 0.20 -0.92 6.21 -2.91 -0.02 -0.94 16 30 H 0.09 -0.31 7.96 -2.38 -0.02 -0.33 16 31 H 0.39 -1.96 8.74 -74.06 -0.65 -2.61 16 32 H -0.29 -0.60 7.11 99.48 0.71 0.10 16 33 H -0.29 -1.18 7.11 99.48 0.71 -0.47 16 34 H 0.16 0.04 7.45 -2.91 -0.02 0.01 16 35 H 0.41 -0.90 7.60 -92.71 -0.71 -1.61 16 36 H 0.08 -0.24 8.14 -2.38 -0.02 -0.26 16 37 H 0.11 -0.51 7.73 -2.39 -0.02 -0.52 16 38 H 0.14 -0.18 8.06 -2.91 -0.02 -0.21 16 39 H 0.15 -0.89 8.06 -2.91 -0.02 -0.91 16 40 H 0.15 -1.07 8.06 -2.91 -0.02 -1.09 16 41 H 0.15 -0.90 6.65 -2.91 -0.02 -0.92 16 42 H 0.11 -0.40 6.30 -2.39 -0.02 -0.42 16 43 H 0.07 0.04 8.14 -2.38 -0.02 0.03 16 Total: 0.00 -20.08 370.02 0.74 -19.34 By element: Atomic # 1 Polarization: -10.19 SS G_CDS: -0.25 Total: -10.43 kcal Atomic # 6 Polarization: 4.17 SS G_CDS: 4.96 Total: 9.13 kcal Atomic # 7 Polarization: -2.70 SS G_CDS: -4.02 Total: -6.72 kcal Atomic # 8 Polarization: -9.20 SS G_CDS: -1.98 Total: -11.18 kcal Atomic # 14 Polarization: -1.96 SS G_CDS: 2.10 Total: 0.14 kcal Atomic # 17 Polarization: -0.21 SS G_CDS: -0.07 Total: -0.28 kcal Total: -20.08 0.74 -19.34 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10565092_10803934.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 57.443 kcal (2) G-P(sol) polarization free energy of solvation -20.081 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 37.362 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.740 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.341 kcal (6) G-S(sol) free energy of system = (1) + (5) 38.102 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.16 seconds