Wall clock time and date at job start Sat Mar 6 2021 13:12:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46502 * 1 3 3 C 1.37654 * 125.67937 * 2 1 4 4 C 1.46680 * 126.23021 * 359.93927 * 3 2 1 5 5 O 1.21694 * 119.99904 * 5.07379 * 4 3 2 6 6 N 1.34770 * 120.00146 * 185.07311 * 4 3 2 7 7 C 1.46504 * 120.00490 * 185.68801 * 6 4 3 8 8 H 1.08997 * 112.84657 * 23.80344 * 7 6 4 9 9 C 1.53776 * 113.61629 * 154.99972 * 7 6 4 10 10 C 1.53778 * 87.08164 * 89.12040 * 9 7 6 11 11 H 1.09005 * 113.61447 * 270.79980 * 10 9 7 12 12 C 1.50693 * 113.61736 * 139.98333 * 10 9 7 13 13 C 1.38333 * 120.01121 * 119.72593 * 12 10 9 14 14 Cl 1.73602 * 120.01130 * 359.97438 * 13 12 10 15 15 C 1.38372 * 119.97380 * 179.70069 * 13 12 10 16 16 C 1.38196 * 119.98829 * 0.59279 * 15 13 12 17 17 C 1.38263 * 120.01158 * 359.70704 * 16 15 13 18 18 C 1.38222 * 120.02641 * 359.96991 * 17 16 15 19 19 C 1.53776 * 87.08302 * 25.43017 * 10 9 7 20 20 C 1.37866 * 107.53530 * 179.97438 * 3 2 1 21 21 C 1.39834 * 107.08706 * 359.97438 * 20 3 2 22 22 C 1.35454 * 107.86172 * 359.75536 * 21 20 3 23 23 C 1.50702 * 125.56248 * 180.23547 * 22 21 20 24 24 O 1.42897 * 109.46816 * 150.18770 * 23 22 21 25 25 Si 1.86305 * 109.46957 * 30.19093 * 23 22 21 26 26 H 1.08994 * 109.47173 * 89.09833 * 1 2 3 27 27 H 1.09002 * 109.47141 * 329.09357 * 1 2 3 28 28 H 1.09005 * 109.46883 * 209.09389 * 1 2 3 29 29 H 0.97006 * 120.00193 * 5.69473 * 6 4 3 30 30 H 1.08996 * 113.61214 * 203.66850 * 9 7 6 31 31 H 1.08999 * 113.61215 * 334.48530 * 9 7 6 32 32 H 1.08005 * 120.00639 * 180.31628 * 15 13 12 33 33 H 1.07992 * 119.99512 * 179.72139 * 16 15 13 34 34 H 1.07998 * 119.98552 * 180.02562 * 17 16 15 35 35 H 1.08000 * 119.99438 * 180.02562 * 18 17 16 36 36 H 1.09002 * 113.61737 * 220.02029 * 19 10 9 37 37 H 1.09000 * 113.61416 * 89.11340 * 19 10 9 38 38 H 1.08003 * 126.45834 * 179.97438 * 20 3 2 39 39 H 1.08000 * 126.06915 * 180.02562 * 21 20 3 40 40 H 1.08997 * 109.47573 * 270.18906 * 23 22 21 41 41 H 0.96704 * 114.00021 * 180.02562 * 24 23 22 42 42 H 1.48496 * 109.99618 * 298.67719 * 25 23 22 43 43 H 1.48494 * 109.99845 * 59.99689 * 25 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2679 1.1182 0.0000 4 6 1.8124 2.5125 -0.0013 5 8 0.6255 2.7649 0.0908 6 7 2.7083 3.5139 -0.1043 7 6 2.2686 4.9059 0.0194 8 1 1.3402 5.0081 0.5812 9 6 3.3784 5.8636 0.4841 10 6 3.7301 6.0510 -1.0011 11 1 4.4580 5.3293 -1.3719 12 6 4.0772 7.4716 -1.3648 13 6 5.3254 7.7681 -1.8823 14 17 6.4927 6.5038 -2.1123 15 6 5.6412 9.0718 -2.2217 16 6 4.7139 10.0789 -2.0322 17 6 3.4687 9.7829 -1.5091 18 6 3.1503 8.4797 -1.1761 19 6 2.2723 5.6739 -1.3129 20 6 3.5780 0.6888 0.0006 21 6 3.5522 -0.7093 0.0015 22 6 2.2555 -1.1009 0.0070 23 6 1.7709 -2.5278 0.0149 24 8 0.5128 -2.5999 0.6886 25 14 3.0114 -3.6000 0.8996 26 1 -0.3633 0.0162 -1.0275 27 1 -0.3633 0.8818 0.5279 28 1 -0.3633 -0.8981 0.4997 29 1 3.6444 3.3132 -0.2605 30 1 3.0026 6.7686 0.9613 31 1 4.1631 5.3750 1.0618 32 1 6.6137 9.3031 -2.6305 33 1 4.9618 11.0971 -2.2928 34 1 2.7442 10.5701 -1.3616 35 1 2.1774 8.2491 -0.7679 36 1 2.1647 5.0319 -2.1872 37 1 1.5940 6.5270 -1.3269 38 1 4.4584 1.3144 0.0004 39 1 4.4133 -1.3611 0.0026 40 1 1.6543 -2.8777 -1.0108 41 1 0.1403 -3.4912 0.7321 42 1 4.3154 -3.5588 0.1904 43 1 3.1793 -3.1333 2.2992 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10565092_10803936.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:12:40 Heat of formation + Delta-G solvation = 37.697681 kcal Electronic energy + Delta-G solvation = -27276.048349 eV Core-core repulsion = 23315.586488 eV Total energy + Delta-G solvation = -3960.461861 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 347.108 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -42.72721 -41.53949 -40.21129 -38.81031 -37.71784 -37.43510 -35.01693 -33.79405 -32.16088 -31.68875 -31.21683 -27.62594 -27.25579 -26.78268 -25.89217 -23.86374 -23.34069 -22.62969 -21.71674 -20.52663 -20.13421 -18.91424 -18.37648 -18.26404 -17.36180 -16.98561 -16.76789 -16.51482 -16.40247 -16.00572 -15.57385 -15.49986 -15.12880 -14.98032 -14.84290 -14.78375 -14.58655 -14.45587 -13.95909 -13.69802 -13.58222 -13.42937 -13.26049 -13.15966 -12.98376 -12.71525 -12.67900 -12.50382 -12.18310 -11.93326 -11.82408 -11.56076 -11.31834 -11.23801 -10.60257 -10.27055 -9.92347 -9.85880 -9.60794 -9.22027 -4.94119 0.15727 0.22567 0.26753 1.12097 1.14716 1.42352 1.63918 1.72776 2.08293 2.16149 2.23607 2.60874 3.14620 3.35309 3.53051 3.56753 3.61956 3.65535 3.82306 3.90418 3.91766 4.07739 4.13763 4.18406 4.28041 4.36527 4.37805 4.38950 4.47359 4.55409 4.68337 4.72056 4.74534 4.79378 4.84312 4.88502 4.93849 4.94812 4.98410 5.07425 5.27845 5.36048 5.47009 5.51412 5.58814 5.82699 5.84751 6.00435 6.34323 6.81590 6.99453 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.060 3.940 2 N -0.399 5.399 3 C -0.082 4.082 4 C 0.592 3.408 5 O -0.579 6.579 6 N -0.689 5.689 7 C 0.120 3.880 8 H 0.094 0.906 9 C -0.121 4.121 10 C -0.076 4.076 11 H 0.102 0.898 12 C -0.070 4.070 13 C -0.050 4.050 14 Cl -0.076 7.076 15 C -0.121 4.121 16 C -0.117 4.117 17 C -0.115 4.115 18 C -0.111 4.111 19 C -0.137 4.137 20 C -0.127 4.127 21 C -0.233 4.233 22 C 0.049 3.951 23 C -0.063 4.063 24 O -0.565 6.565 25 Si 0.821 3.179 26 H 0.073 0.927 27 H 0.081 0.919 28 H 0.125 0.875 29 H 0.414 0.586 30 H 0.111 0.889 31 H 0.084 0.916 32 H 0.139 0.861 33 H 0.150 0.850 34 H 0.149 0.851 35 H 0.148 0.852 36 H 0.064 0.936 37 H 0.107 0.893 38 H 0.173 0.827 39 H 0.155 0.845 40 H 0.104 0.896 41 H 0.410 0.590 42 H -0.280 1.280 43 H -0.310 1.310 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.348 -2.270 -0.546 2.361 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.080 4.080 2 N -0.072 5.072 3 C -0.196 4.196 4 C 0.381 3.619 5 O -0.460 6.460 6 N -0.340 5.340 7 C 0.015 3.985 8 H 0.112 0.888 9 C -0.159 4.159 10 C -0.094 4.094 11 H 0.120 0.880 12 C -0.071 4.071 13 C -0.077 4.077 14 Cl -0.047 7.047 15 C -0.140 4.140 16 C -0.135 4.135 17 C -0.133 4.133 18 C -0.129 4.129 19 C -0.176 4.176 20 C -0.153 4.153 21 C -0.256 4.256 22 C -0.070 4.070 23 C -0.171 4.171 24 O -0.377 6.377 25 Si 0.725 3.275 26 H 0.092 0.908 27 H 0.099 0.901 28 H 0.142 0.858 29 H 0.252 0.748 30 H 0.129 0.871 31 H 0.103 0.897 32 H 0.157 0.843 33 H 0.167 0.833 34 H 0.167 0.833 35 H 0.166 0.834 36 H 0.082 0.918 37 H 0.125 0.875 38 H 0.190 0.810 39 H 0.173 0.827 40 H 0.121 0.879 41 H 0.263 0.737 42 H -0.207 1.207 43 H -0.238 1.238 Dipole moment (debyes) X Y Z Total from point charges 0.044 -1.559 -0.030 1.560 hybrid contribution 0.539 0.521 -0.527 0.917 sum 0.583 -1.038 -0.558 1.315 Atomic orbital electron populations 1.22587 0.75102 1.06369 1.03981 1.43985 1.07631 1.04224 1.51321 1.20236 0.91275 0.87667 1.20397 1.17072 0.85325 0.83990 0.75508 1.90772 1.17511 1.85226 1.52536 1.45216 1.11492 1.04776 1.72501 1.21886 0.99173 0.79410 0.98064 0.88774 1.23381 0.97724 0.99605 0.95170 1.21670 0.97643 0.92709 0.97421 0.87994 1.19687 0.92122 0.96444 0.98844 1.21049 0.91559 0.90144 1.04944 1.98362 1.58315 1.52312 1.95738 1.21302 1.01339 0.90934 1.00413 1.21451 0.93394 0.99959 0.98666 1.21601 0.97190 0.97164 0.97365 1.21261 0.99745 0.92104 0.99814 1.23552 0.95981 1.00537 0.97509 1.21613 0.94787 0.95195 1.03707 1.20809 0.95213 0.96080 1.13531 1.20799 0.90770 0.88646 1.06769 1.24813 0.95169 0.93645 1.03508 1.86275 1.34921 1.37244 1.79232 0.94379 0.75001 0.83675 0.74469 0.90850 0.90082 0.85754 0.74848 0.87115 0.89688 0.84318 0.83256 0.83279 0.83416 0.91761 0.87479 0.80998 0.82711 0.87884 0.73650 1.20707 1.23830 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.43 10.31 127.77 1.32 1.75 16 2 N -0.40 -3.75 3.16 -519.70 -1.64 -5.40 16 3 C -0.08 -0.76 6.89 40.35 0.28 -0.48 16 4 C 0.59 5.68 7.77 86.45 0.67 6.35 16 5 O -0.58 -9.15 14.31 -4.33 -0.06 -9.21 16 6 N -0.69 -1.76 5.23 -444.01 -2.32 -4.08 16 7 C 0.12 0.11 4.29 45.52 0.20 0.30 16 8 H 0.09 0.38 7.54 -2.39 -0.02 0.36 16 9 C -0.12 0.34 7.29 31.12 0.23 0.56 16 10 C -0.08 0.08 3.64 -11.02 -0.04 0.04 16 11 H 0.10 -0.03 6.58 -2.38 -0.02 -0.05 16 12 C -0.07 -0.05 5.29 -19.84 -0.10 -0.15 16 13 C -0.05 -0.13 6.31 22.32 0.14 0.01 16 14 Cl -0.08 -0.23 27.16 -2.72 -0.07 -0.30 16 15 C -0.12 -0.12 9.83 22.29 0.22 0.10 16 16 C -0.12 0.18 10.05 22.27 0.22 0.40 16 17 C -0.12 0.28 10.05 22.27 0.22 0.50 16 18 C -0.11 0.19 8.61 22.27 0.19 0.38 16 19 C -0.14 0.03 7.25 31.12 0.23 0.26 16 20 C -0.13 -0.65 10.35 22.57 0.23 -0.42 16 21 C -0.23 -1.37 9.37 22.01 0.21 -1.16 16 22 C 0.05 0.32 6.17 41.34 0.26 0.57 16 23 C -0.06 0.10 2.98 71.24 0.21 0.32 16 24 O -0.56 1.68 9.73 -148.98 -1.45 0.23 16 25 Si 0.82 -3.09 31.23 68.60 2.14 -0.95 16 26 H 0.07 0.43 8.14 -2.39 -0.02 0.41 16 27 H 0.08 0.87 6.27 -2.39 -0.01 0.86 16 28 H 0.12 0.54 5.16 -2.38 -0.01 0.52 16 29 H 0.41 -0.82 7.65 -92.70 -0.71 -1.53 16 30 H 0.11 -0.50 7.72 -2.39 -0.02 -0.52 16 31 H 0.08 -0.29 8.14 -2.39 -0.02 -0.31 16 32 H 0.14 -0.15 8.06 -2.91 -0.02 -0.18 16 33 H 0.15 -0.86 8.06 -2.91 -0.02 -0.88 16 34 H 0.15 -1.01 8.06 -2.91 -0.02 -1.03 16 35 H 0.15 -0.79 6.66 -2.91 -0.02 -0.81 16 36 H 0.06 0.17 8.14 -2.39 -0.02 0.15 16 37 H 0.11 -0.26 6.31 -2.39 -0.02 -0.27 16 38 H 0.17 -0.27 7.49 -2.91 -0.02 -0.29 16 39 H 0.16 0.45 6.70 -2.91 -0.02 0.43 16 40 H 0.10 -0.60 7.96 -2.39 -0.02 -0.62 16 41 H 0.41 -5.75 8.74 -74.05 -0.65 -6.40 16 42 H -0.28 -0.16 6.87 99.48 0.68 0.52 16 43 H -0.31 -1.83 7.11 99.48 0.71 -1.12 16 Total: 0.00 -22.15 364.64 1.00 -21.15 By element: Atomic # 1 Polarization: -10.51 SS G_CDS: -0.27 Total: -10.77 kcal Atomic # 6 Polarization: 4.66 SS G_CDS: 4.68 Total: 9.33 kcal Atomic # 7 Polarization: -5.51 SS G_CDS: -3.97 Total: -9.48 kcal Atomic # 8 Polarization: -7.47 SS G_CDS: -1.51 Total: -8.98 kcal Atomic # 14 Polarization: -3.09 SS G_CDS: 2.14 Total: -0.95 kcal Atomic # 17 Polarization: -0.23 SS G_CDS: -0.07 Total: -0.30 kcal Total: -22.15 1.00 -21.15 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10565092_10803936.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 58.849 kcal (2) G-P(sol) polarization free energy of solvation -22.147 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 36.702 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.996 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.151 kcal (6) G-S(sol) free energy of system = (1) + (5) 37.698 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds