Wall clock time and date at job start Sat Mar 6 2021 13:12:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86292 * 109.47490 * 2 1 4 4 C 1.50706 * 109.47014 * 119.99879 * 2 1 3 5 5 C 1.36446 * 120.29456 * 119.97585 * 4 2 1 6 6 C 1.40096 * 119.25108 * 179.77477 * 5 4 2 7 7 C 1.40858 * 132.86138 * 179.65430 * 6 5 4 8 8 C 1.46560 * 126.58218 * 0.64826 * 7 6 5 9 9 O 1.21723 * 119.99983 * 359.70614 * 8 7 6 10 10 N 1.34772 * 120.00283 * 179.71185 * 8 7 6 11 11 C 1.46506 * 120.00033 * 180.02562 * 10 8 7 12 12 H 1.08992 * 112.90684 * 336.24748 * 11 10 8 13 13 C 1.54049 * 113.61276 * 107.61836 * 11 10 8 14 14 C 1.53781 * 87.08031 * 89.07129 * 13 11 10 15 15 H 1.08999 * 113.61181 * 270.87794 * 14 13 11 16 16 C 1.50698 * 113.61565 * 139.97986 * 14 13 11 17 17 C 1.38328 * 120.00999 * 142.23488 * 16 14 13 18 18 Cl 1.73601 * 120.01177 * 359.96375 * 17 16 14 19 19 C 1.38367 * 119.97342 * 179.70272 * 17 16 14 20 20 C 1.38196 * 119.98721 * 0.58124 * 19 17 16 21 21 C 1.38258 * 120.01442 * 359.70979 * 20 19 17 22 22 C 1.38223 * 120.02468 * 359.97438 * 21 20 19 23 23 C 1.53781 * 87.08070 * 25.42738 * 14 13 11 24 24 C 1.40553 * 106.83520 * 180.38063 * 7 6 5 25 25 N 1.30735 * 108.74680 * 0.22980 * 24 7 6 26 26 N 1.36576 * 120.22840 * 0.48274 * 6 5 4 27 27 C 1.36237 * 120.08003 * 359.51803 * 26 6 5 28 28 C 1.35176 * 120.71018 * 0.25218 * 27 26 6 29 29 H 0.96701 * 113.99781 * 60.00035 * 1 2 3 30 30 H 1.08995 * 109.47092 * 239.99620 * 2 1 3 31 31 H 1.48503 * 110.00146 * 298.68086 * 3 2 1 32 32 H 1.48503 * 110.00192 * 59.99565 * 3 2 1 33 33 H 1.08000 * 120.37443 * 0.02562 * 5 4 2 34 34 H 0.97002 * 120.00078 * 359.97438 * 10 8 7 35 35 H 1.09005 * 113.62125 * 334.52173 * 13 11 10 36 36 H 1.08996 * 113.68970 * 203.62749 * 13 11 10 37 37 H 1.08003 * 120.00849 * 180.31962 * 19 17 16 38 38 H 1.08002 * 119.99229 * 179.73133 * 20 19 17 39 39 H 1.07997 * 119.99206 * 179.97438 * 21 20 19 40 40 H 1.08003 * 119.99420 * 180.02562 * 22 21 20 41 41 H 1.09002 * 113.61445 * 89.11830 * 23 14 13 42 42 H 1.09002 * 113.61408 * 219.93560 * 23 14 13 43 43 H 1.08007 * 125.62192 * 180.20777 * 24 7 6 44 44 H 1.07999 * 119.64175 * 180.27913 * 27 26 6 45 45 H 1.08001 * 119.84116 * 180.02562 * 28 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7563 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.7157 -1.8206 1.1124 6 6 3.1745 -2.4611 2.2708 7 6 3.9741 -3.6012 2.4825 8 6 4.5751 -4.4505 1.4502 9 8 4.3958 -4.1972 0.2732 10 7 5.3261 -5.5122 1.8041 11 6 5.9273 -6.3608 0.7722 12 1 5.3976 -6.3116 -0.1791 13 6 7.4523 -6.1869 0.6415 14 6 7.5900 -7.2890 1.7051 15 1 7.5966 -6.9109 2.7274 16 6 8.7125 -8.2562 1.4303 17 6 9.4720 -8.7497 2.4758 18 17 9.1331 -8.2543 4.1047 19 6 10.4985 -9.6425 2.2232 20 6 10.7721 -10.0314 0.9257 21 6 10.0165 -9.5332 -0.1195 22 6 8.9868 -8.6464 0.1328 23 6 6.2132 -7.7961 1.2447 24 6 4.0902 -3.7644 3.8737 25 7 3.4175 -2.8126 4.4659 26 7 2.8305 -1.9829 3.5030 27 6 2.0467 -0.8738 3.6106 28 6 1.5964 -0.2369 2.5065 29 1 -0.3933 0.4417 -0.7651 30 1 1.7923 -0.5139 -0.8899 31 1 1.5880 2.4585 -1.2242 32 1 1.5615 2.4679 1.2084 33 1 2.9832 -2.1989 0.1368 34 1 5.4693 -5.7140 2.7421 35 1 7.8108 -5.2124 0.9735 36 1 7.8434 -6.4714 -0.3352 37 1 11.0886 -10.0322 3.0396 38 1 11.5761 -10.7250 0.7280 39 1 10.2309 -9.8371 -1.1335 40 1 8.3966 -8.2578 -0.6840 41 1 6.2642 -8.5211 0.4324 42 1 5.5718 -8.1222 2.0635 43 1 4.6435 -4.5473 4.3712 44 1 1.7827 -0.4991 4.5885 45 1 0.9762 0.6414 2.6081 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10565092_11618758.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:12:43 Heat of formation + Delta-G solvation = 93.351694 kcal Electronic energy + Delta-G solvation = -31270.410654 eV Core-core repulsion = 26862.257799 eV Total energy + Delta-G solvation = -4408.152855 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 384.103 amu Computer time = 1.36 seconds Orbital eigenvalues (eV) -43.32549 -41.48544 -40.19889 -39.23974 -38.64821 -37.38673 -37.38138 -34.59560 -34.20052 -32.19399 -31.84013 -31.63874 -30.20003 -27.41739 -26.66160 -26.23562 -24.96486 -23.98225 -23.52623 -23.00290 -22.44542 -21.33306 -20.09393 -19.27967 -18.58538 -18.20667 -17.91083 -17.51266 -17.06005 -16.94502 -16.76001 -16.47582 -16.32066 -15.88814 -15.70354 -15.58298 -15.24814 -15.06698 -14.73097 -14.72540 -14.44242 -14.31240 -14.13474 -14.02411 -13.46136 -13.32102 -13.29745 -13.03417 -12.91716 -12.68698 -12.64716 -12.44600 -12.16118 -12.09921 -11.96262 -11.70656 -11.61120 -11.48434 -11.20461 -10.95935 -10.85214 -10.25685 -10.05701 -9.80237 -9.55050 -8.80811 -4.90200 -0.59106 -0.13778 0.21154 0.31768 1.00128 1.01628 1.19889 1.21394 1.60627 1.86534 2.04840 2.20331 2.47148 2.66227 3.00601 3.15798 3.47426 3.49889 3.62842 3.64431 3.69989 3.73811 3.86740 3.90230 3.97257 4.00925 4.14191 4.19553 4.21635 4.33832 4.36594 4.42706 4.43379 4.56828 4.68879 4.75194 4.76774 4.80324 4.92367 4.95667 5.02813 5.06622 5.10713 5.14584 5.20223 5.26882 5.32990 5.47883 5.52501 5.63493 5.68409 5.89701 6.27452 6.53026 6.60453 7.30277 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.551 6.551 2 C -0.086 4.086 3 Si 0.763 3.237 4 C -0.020 4.020 5 C -0.110 4.110 6 C 0.152 3.848 7 C -0.337 4.337 8 C 0.604 3.396 9 O -0.585 6.585 10 N -0.699 5.699 11 C 0.122 3.878 12 H 0.093 0.907 13 C -0.138 4.138 14 C -0.076 4.076 15 H 0.104 0.896 16 C -0.069 4.069 17 C -0.051 4.051 18 Cl -0.075 7.075 19 C -0.122 4.122 20 C -0.118 4.118 21 C -0.116 4.116 22 C -0.111 4.111 23 C -0.123 4.123 24 C 0.130 3.870 25 N -0.340 5.340 26 N -0.273 5.273 27 C 0.112 3.888 28 C -0.146 4.146 29 H 0.401 0.599 30 H 0.096 0.904 31 H -0.275 1.275 32 H -0.275 1.275 33 H 0.158 0.842 34 H 0.411 0.589 35 H 0.066 0.934 36 H 0.104 0.896 37 H 0.138 0.862 38 H 0.148 0.852 39 H 0.148 0.852 40 H 0.148 0.852 41 H 0.106 0.894 42 H 0.083 0.917 43 H 0.232 0.768 44 H 0.202 0.798 45 H 0.177 0.823 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.935 0.503 -1.812 2.698 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.362 6.362 2 C -0.194 4.194 3 Si 0.664 3.336 4 C -0.025 4.025 5 C -0.130 4.130 6 C 0.031 3.969 7 C -0.352 4.352 8 C 0.394 3.606 9 O -0.467 6.467 10 N -0.350 5.350 11 C 0.017 3.983 12 H 0.111 0.889 13 C -0.176 4.176 14 C -0.095 4.095 15 H 0.122 0.878 16 C -0.070 4.070 17 C -0.077 4.077 18 Cl -0.047 7.047 19 C -0.141 4.141 20 C -0.136 4.136 21 C -0.134 4.134 22 C -0.129 4.129 23 C -0.161 4.161 24 C -0.051 4.051 25 N -0.160 5.160 26 N -0.037 5.037 27 C -0.014 4.014 28 C -0.167 4.167 29 H 0.252 0.748 30 H 0.114 0.886 31 H -0.200 1.200 32 H -0.201 1.201 33 H 0.176 0.824 34 H 0.247 0.753 35 H 0.085 0.915 36 H 0.122 0.878 37 H 0.156 0.844 38 H 0.166 0.834 39 H 0.166 0.834 40 H 0.166 0.834 41 H 0.124 0.876 42 H 0.102 0.898 43 H 0.248 0.752 44 H 0.219 0.781 45 H 0.194 0.806 Dipole moment (debyes) X Y Z Total from point charges 1.359 1.636 -0.689 2.236 hybrid contribution -0.737 -0.636 -0.464 1.078 sum 0.622 1.000 -1.153 1.648 Atomic orbital electron populations 1.86526 1.17342 1.80942 1.51374 1.24943 0.84894 1.12296 0.97237 0.93510 0.90742 0.70976 0.78393 1.19605 0.94329 0.93389 0.95209 1.20654 0.99769 0.94801 0.97775 1.19530 0.96001 0.94656 0.86707 1.19668 1.17358 1.04012 0.94154 1.16925 0.77069 0.79770 0.86849 1.90747 1.63268 1.72774 1.19903 1.45258 1.51382 1.27963 1.10386 1.21835 0.93626 0.90609 0.92270 0.88897 1.23600 0.95637 0.98560 0.99844 1.21680 0.92414 0.94759 1.00615 0.87834 1.19720 0.96752 0.98105 0.92387 1.21044 0.99681 1.01311 0.85672 1.98360 1.94830 1.90616 1.20853 1.21291 0.96883 0.97176 0.98717 1.21436 1.00388 1.00186 0.91610 1.21593 0.94892 0.96331 1.00575 1.21268 0.98229 0.97668 0.95761 1.23373 0.94887 0.95414 1.02439 1.24581 0.93451 0.95704 0.91374 1.77573 1.19593 1.07293 1.11545 1.46281 1.32335 1.19501 1.05545 1.22108 0.91491 0.84530 1.03254 1.21042 1.02696 1.02955 0.90027 0.74818 0.88640 1.20029 1.20057 0.82397 0.75255 0.91528 0.87808 0.84426 0.83400 0.83377 0.83392 0.87554 0.89846 0.75188 0.78070 0.80626 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.39 12.76 -148.98 -1.90 -1.51 16 2 C -0.09 0.20 2.81 71.24 0.20 0.40 16 3 Si 0.76 -3.48 31.97 68.60 2.19 -1.29 16 4 C -0.02 -0.03 4.53 -19.81 -0.09 -0.12 16 5 C -0.11 -0.57 9.35 22.30 0.21 -0.36 16 6 C 0.15 1.15 6.76 39.50 0.27 1.42 16 7 C -0.34 -2.16 6.17 -19.90 -0.12 -2.28 16 8 C 0.60 4.36 7.78 86.41 0.67 5.03 16 9 O -0.59 -8.06 15.31 -4.42 -0.07 -8.13 16 10 N -0.70 -0.27 5.25 -443.65 -2.33 -2.60 16 11 C 0.12 -0.05 4.34 45.61 0.20 0.15 16 12 H 0.09 0.28 7.46 -2.39 -0.02 0.27 16 13 C -0.14 0.21 7.26 31.21 0.23 0.44 16 14 C -0.08 0.17 3.64 -11.01 -0.04 0.13 16 15 H 0.10 -0.19 6.57 -2.39 -0.02 -0.21 16 16 C -0.07 0.00 5.29 -19.84 -0.10 -0.10 16 17 C -0.05 -0.10 6.31 22.32 0.14 0.04 16 18 Cl -0.08 -0.16 27.16 -2.72 -0.07 -0.24 16 19 C -0.12 -0.08 9.83 22.29 0.22 0.14 16 20 C -0.12 0.21 10.05 22.26 0.22 0.43 16 21 C -0.12 0.32 10.05 22.27 0.22 0.54 16 22 C -0.11 0.24 8.61 22.27 0.19 0.43 16 23 C -0.12 0.45 7.28 31.12 0.23 0.67 16 24 C 0.13 0.31 11.44 85.42 0.98 1.28 16 25 N -0.34 -2.21 12.57 -56.62 -0.71 -2.92 16 26 N -0.27 -1.63 3.86 -187.28 -0.72 -2.35 16 27 C 0.11 0.04 11.17 83.30 0.93 0.98 16 28 C -0.15 0.09 8.67 22.03 0.19 0.28 16 29 H 0.40 -3.46 8.74 -74.06 -0.65 -4.11 16 30 H 0.10 -0.45 7.71 -2.39 -0.02 -0.47 16 31 H -0.27 0.18 7.11 99.48 0.71 0.89 16 32 H -0.27 0.00 7.07 99.48 0.70 0.70 16 33 H 0.16 0.92 7.01 -2.91 -0.02 0.90 16 34 H 0.41 -2.01 7.62 -92.71 -0.71 -2.72 16 35 H 0.07 0.06 8.14 -2.38 -0.02 0.04 16 36 H 0.10 -0.35 6.31 -2.39 -0.02 -0.37 16 37 H 0.14 -0.19 8.06 -2.91 -0.02 -0.21 16 38 H 0.15 -0.86 8.06 -2.91 -0.02 -0.89 16 39 H 0.15 -1.04 8.06 -2.91 -0.02 -1.06 16 40 H 0.15 -0.87 6.66 -2.91 -0.02 -0.88 16 41 H 0.11 -0.52 7.72 -2.39 -0.02 -0.54 16 42 H 0.08 -0.35 8.14 -2.39 -0.02 -0.37 16 43 H 0.23 -1.59 7.46 -2.91 -0.02 -1.61 16 44 H 0.20 -1.17 8.06 -2.91 -0.02 -1.19 16 45 H 0.18 -0.76 7.52 -2.91 -0.02 -0.79 16 Total: 0.00 -23.02 393.70 0.88 -22.14 By element: Atomic # 1 Polarization: -12.38 SS G_CDS: -0.25 Total: -12.62 kcal Atomic # 6 Polarization: 4.77 SS G_CDS: 4.74 Total: 9.51 kcal Atomic # 7 Polarization: -4.10 SS G_CDS: -3.77 Total: -7.87 kcal Atomic # 8 Polarization: -7.68 SS G_CDS: -1.97 Total: -9.65 kcal Atomic # 14 Polarization: -3.48 SS G_CDS: 2.19 Total: -1.29 kcal Atomic # 17 Polarization: -0.16 SS G_CDS: -0.07 Total: -0.24 kcal Total: -23.02 0.88 -22.14 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10565092_11618758.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 115.494 kcal (2) G-P(sol) polarization free energy of solvation -23.022 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 92.472 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.879 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.143 kcal (6) G-S(sol) free energy of system = (1) + (5) 93.352 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.36 seconds