Wall clock time and date at job start Sat Mar 6 2021 13:12:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35662 * 116.99938 * 2 1 4 4 C 1.38405 * 120.12062 * 0.02562 * 3 2 1 5 5 C 1.38723 * 120.03168 * 179.97438 * 4 3 2 6 6 O 1.35714 * 119.86198 * 180.02562 * 5 4 3 7 7 C 1.42901 * 117.00296 * 0.02562 * 6 5 4 8 8 C 1.39140 * 120.27490 * 0.04582 * 5 4 3 9 9 C 1.50698 * 119.88043 * 179.97438 * 8 5 4 10 10 O 1.42907 * 109.47240 * 74.99795 * 9 8 5 11 11 Si 1.86300 * 109.47350 * 194.99870 * 9 8 5 12 12 C 1.37580 * 120.24028 * 359.67194 * 8 5 4 13 13 C 1.39824 * 119.96101 * 0.57984 * 12 8 5 14 14 C 1.47309 * 120.13194 * 179.71985 * 13 12 8 15 15 O 1.21624 * 119.99557 * 179.73053 * 14 13 12 16 16 N 1.34767 * 120.00281 * 359.72263 * 14 13 12 17 17 C 1.46500 * 120.00231 * 179.97438 * 16 14 13 18 18 H 1.08999 * 112.84986 * 336.20730 * 17 16 14 19 19 C 1.53962 * 113.60902 * 107.46926 * 17 16 14 20 20 C 1.53781 * 87.01687 * 89.20400 * 19 17 16 21 21 H 1.09000 * 113.61266 * 270.76431 * 20 19 17 22 22 C 1.50707 * 113.61444 * 139.95058 * 20 19 17 23 23 C 1.38325 * 120.00613 * 140.83639 * 22 20 19 24 24 Cl 1.73598 * 120.01483 * 0.04901 * 23 22 20 25 25 C 1.38378 * 119.97237 * 180.02562 * 23 22 20 26 26 C 1.38184 * 119.98682 * 0.02562 * 25 23 22 27 27 C 1.38269 * 120.01333 * 359.74544 * 26 25 23 28 28 C 1.38215 * 120.02528 * 0.51246 * 27 26 25 29 29 C 1.53776 * 113.61666 * 205.00087 * 17 16 14 30 30 H 1.09007 * 109.47292 * 60.00123 * 1 2 3 31 31 H 1.08995 * 109.47375 * 179.97438 * 1 2 3 32 32 H 1.09001 * 109.47512 * 300.00166 * 1 2 3 33 33 H 1.08005 * 119.98303 * 359.97438 * 4 3 2 34 34 H 1.09011 * 109.47038 * 59.99626 * 7 6 5 35 35 H 1.09002 * 109.47416 * 179.97438 * 7 6 5 36 36 H 1.08998 * 109.47076 * 300.00119 * 7 6 5 37 37 H 1.08999 * 109.47344 * 315.00185 * 9 8 5 38 38 H 0.96691 * 113.99901 * 179.97438 * 10 9 8 39 39 H 1.48497 * 110.00172 * 178.68163 * 11 9 8 40 40 H 1.48507 * 109.99676 * 300.00076 * 11 9 8 41 41 H 1.08005 * 120.02344 * 180.29886 * 12 8 5 42 42 H 0.97008 * 120.00215 * 0.02562 * 16 14 13 43 43 H 1.08996 * 113.66745 * 334.67558 * 19 17 16 44 44 H 1.09001 * 113.60910 * 203.71787 * 19 17 16 45 45 H 1.08002 * 120.00628 * 180.02562 * 25 23 22 46 46 H 1.08000 * 119.99667 * 179.97438 * 26 25 23 47 47 H 1.07997 * 119.98427 * 180.27375 * 27 26 25 48 48 H 1.08002 * 119.99636 * 179.76953 * 28 27 26 49 49 H 1.09001 * 113.61307 * 156.25264 * 29 17 16 50 50 H 1.08996 * 113.69272 * 25.36693 * 29 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0449 1.2088 0.0000 4 6 1.2935 2.3711 0.0005 5 6 1.9252 3.6062 0.0011 6 8 1.1850 4.7437 0.0021 7 6 -0.2360 4.5932 0.0032 8 6 3.3144 3.6835 0.0001 9 6 3.9914 5.0299 0.0001 10 8 3.8947 5.6117 1.3018 11 14 5.7858 4.8228 -0.4558 12 6 4.0723 2.5353 0.0054 13 6 3.4460 1.2852 -0.0004 14 6 4.2539 0.0534 -0.0010 15 8 3.7065 -1.0327 -0.0012 16 7 5.5994 0.1299 -0.0015 17 6 6.4028 -1.0952 -0.0015 18 1 5.8665 -1.9531 0.4041 19 6 7.0946 -1.3789 -1.3474 20 6 8.2751 -0.5430 -0.8252 21 1 8.1911 0.5200 -1.0513 22 6 9.6235 -1.1127 -1.1837 23 6 10.6564 -0.2682 -1.5486 24 17 10.4005 1.4482 -1.5926 25 6 11.8941 -0.7921 -1.8781 26 6 12.0972 -2.1585 -1.8429 27 6 11.0657 -3.0018 -1.4735 28 6 9.8277 -2.4795 -1.1494 29 6 7.8087 -0.9099 0.5934 30 1 -0.3634 0.5138 -0.8900 31 1 -0.3634 -1.0276 -0.0005 32 1 -0.3634 0.5139 0.8900 33 1 0.2148 2.3165 0.0005 34 1 -0.5425 4.0435 0.8933 35 1 -0.7056 5.5768 0.0044 36 1 -0.5439 4.0443 -0.8867 37 1 3.5049 5.6812 -0.7259 38 1 4.3105 6.4815 1.3756 39 1 6.4572 6.1468 -0.4904 40 1 6.4604 3.9367 0.5267 41 1 5.1505 2.5994 0.0095 42 1 6.0360 0.9962 -0.0011 43 1 6.5877 -0.9321 -2.2026 44 1 7.3379 -2.4304 -1.5000 45 1 12.7011 -0.1332 -2.1627 46 1 13.0630 -2.5676 -2.1005 47 1 11.2262 -4.0693 -1.4419 48 1 9.0212 -3.1389 -0.8645 49 1 8.2476 -1.8329 0.9723 50 1 7.8788 -0.0856 1.3030 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10565092_12297780.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:12:50 Heat of formation + Delta-G solvation = -49.806389 kcal Electronic energy + Delta-G solvation = -35939.870039 eV Core-core repulsion = 31119.911483 eV Total energy + Delta-G solvation = -4819.958555 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 404.127 amu Computer time = 1.39 seconds Orbital eigenvalues (eV) -42.15102 -41.42978 -40.38840 -39.87975 -38.75301 -38.37416 -37.38614 -37.16625 -34.62701 -32.41146 -32.18174 -31.64104 -31.21758 -28.97764 -28.20902 -26.70009 -26.37951 -26.04782 -24.68346 -23.69552 -22.99293 -22.37013 -21.58988 -20.23871 -19.89361 -18.81559 -18.56573 -18.23480 -18.01335 -17.33487 -17.09199 -16.91835 -16.56830 -16.52138 -16.38298 -16.30625 -15.84780 -15.77370 -15.52698 -15.46382 -15.09815 -14.78575 -14.73873 -14.52767 -14.30436 -14.12517 -13.89640 -13.77013 -13.52240 -13.43907 -13.31807 -12.92641 -12.79657 -12.66224 -12.54143 -12.50726 -12.44835 -12.16585 -12.11945 -11.93445 -11.73489 -11.63917 -11.49218 -11.22893 -10.96641 -10.44300 -10.12761 -9.93006 -9.80605 -9.55648 -9.20557 -4.97214 -0.27564 0.05991 0.20818 0.31575 1.19420 1.25517 1.53614 1.69883 1.88255 2.05322 2.10469 2.17270 2.55992 2.65837 3.30899 3.42574 3.51723 3.61773 3.65301 3.69219 3.74039 3.85037 3.89643 3.98305 4.07990 4.12962 4.15971 4.20382 4.23177 4.28426 4.28889 4.31155 4.41321 4.42774 4.43417 4.63154 4.67125 4.67930 4.75040 4.75363 4.77627 4.82770 4.91746 4.94085 5.01637 5.02759 5.04729 5.16093 5.27765 5.32569 5.45496 5.52041 5.63429 5.89375 6.02379 6.27645 6.48469 6.62240 7.21128 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.009 3.991 2 O -0.302 6.302 3 C 0.220 3.780 4 C -0.309 4.309 5 C 0.216 3.784 6 O -0.311 6.311 7 C 0.011 3.989 8 C -0.163 4.163 9 C -0.068 4.068 10 O -0.554 6.554 11 Si 0.743 3.257 12 C -0.001 4.001 13 C -0.228 4.228 14 C 0.568 3.432 15 O -0.559 6.559 16 N -0.705 5.705 17 C 0.118 3.882 18 H 0.093 0.907 19 C -0.135 4.135 20 C -0.078 4.078 21 H 0.104 0.896 22 C -0.069 4.069 23 C -0.050 4.050 24 Cl -0.076 7.076 25 C -0.121 4.121 26 C -0.117 4.117 27 C -0.116 4.116 28 C -0.111 4.111 29 C -0.126 4.126 30 H 0.074 0.926 31 H 0.114 0.886 32 H 0.069 0.931 33 H 0.167 0.833 34 H 0.065 0.935 35 H 0.121 0.879 36 H 0.073 0.927 37 H 0.086 0.914 38 H 0.392 0.608 39 H -0.281 1.281 40 H -0.272 1.272 41 H 0.154 0.846 42 H 0.407 0.593 43 H 0.071 0.929 44 H 0.105 0.895 45 H 0.139 0.861 46 H 0.149 0.851 47 H 0.148 0.852 48 H 0.148 0.852 49 H 0.109 0.891 50 H 0.079 0.921 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.621 1.412 -2.574 3.000 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.085 4.085 2 O -0.213 6.213 3 C 0.171 3.829 4 C -0.329 4.329 5 C 0.168 3.832 6 O -0.223 6.223 7 C -0.083 4.083 8 C -0.164 4.164 9 C -0.177 4.177 10 O -0.364 6.364 11 Si 0.646 3.354 12 C -0.020 4.020 13 C -0.232 4.232 14 C 0.358 3.642 15 O -0.438 6.438 16 N -0.358 5.358 17 C 0.013 3.987 18 H 0.111 0.889 19 C -0.174 4.174 20 C -0.096 4.096 21 H 0.122 0.878 22 C -0.069 4.069 23 C -0.076 4.076 24 Cl -0.047 7.047 25 C -0.139 4.139 26 C -0.135 4.135 27 C -0.134 4.134 28 C -0.129 4.129 29 C -0.164 4.164 30 H 0.092 0.908 31 H 0.132 0.868 32 H 0.088 0.912 33 H 0.184 0.816 34 H 0.084 0.916 35 H 0.139 0.861 36 H 0.092 0.908 37 H 0.104 0.896 38 H 0.242 0.758 39 H -0.207 1.207 40 H -0.199 1.199 41 H 0.171 0.829 42 H 0.244 0.756 43 H 0.089 0.911 44 H 0.123 0.877 45 H 0.157 0.843 46 H 0.166 0.834 47 H 0.166 0.834 48 H 0.165 0.835 49 H 0.127 0.873 50 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges -0.420 0.360 -2.210 2.278 hybrid contribution -0.536 1.633 0.838 1.912 sum -0.956 1.993 -1.371 2.601 Atomic orbital electron populations 1.23490 0.76444 1.05838 1.02696 1.86364 1.23269 1.25696 1.85983 1.18932 0.90911 0.84827 0.88277 1.21419 1.02095 0.90588 1.18758 1.18875 0.90715 0.85117 0.88529 1.86112 1.21132 1.28541 1.86491 1.23489 0.76151 1.05975 1.02652 1.18567 0.90509 0.94814 1.12475 1.24749 1.11818 0.93197 0.87901 1.86568 1.80720 1.38703 1.30398 0.94491 0.72124 0.80862 0.87906 1.20929 0.99978 0.89302 0.91752 1.19101 0.90994 0.93583 1.19521 1.17983 0.82300 0.88366 0.75594 1.90809 1.72182 1.30022 1.50767 1.45514 1.05124 1.09799 1.75318 1.21882 0.91255 0.87827 0.97764 0.88902 1.23569 0.95082 1.01475 0.97249 1.21703 0.90121 1.00624 0.97180 0.87785 1.19689 0.94517 0.93454 0.99288 1.21035 0.96153 0.84589 1.05839 1.98358 1.96740 1.12450 1.97132 1.21288 0.95752 0.96627 1.00282 1.21438 1.00652 0.92324 0.99132 1.21589 0.92705 1.01450 0.97621 1.21250 0.98378 0.93657 0.99589 1.23398 0.93450 1.03823 0.95696 0.90756 0.86782 0.91211 0.81601 0.91649 0.86069 0.90810 0.89643 0.75776 1.20708 1.19853 0.82873 0.75648 0.91059 0.87660 0.84329 0.83352 0.83388 0.83473 0.87270 0.90223 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.01 9.81 113.37 1.11 1.10 16 2 O -0.30 -2.77 8.56 -68.82 -0.59 -3.36 16 3 C 0.22 1.69 6.70 22.82 0.15 1.84 16 4 C -0.31 -0.95 8.01 22.43 0.18 -0.77 16 5 C 0.22 0.93 6.67 22.60 0.15 1.08 16 6 O -0.31 -0.86 9.80 -90.35 -0.89 -1.74 16 7 C 0.01 -0.06 9.80 113.37 1.11 1.06 16 8 C -0.16 -0.66 5.30 -19.80 -0.10 -0.77 16 9 C -0.07 -0.08 2.36 71.24 0.17 0.09 16 10 O -0.55 -2.03 12.86 -148.98 -1.92 -3.95 16 11 Si 0.74 -1.48 30.20 68.60 2.07 0.59 16 12 C 0.00 0.00 8.14 22.50 0.18 0.18 16 13 C -0.23 -1.73 5.89 -20.00 -0.12 -1.85 16 14 C 0.57 5.60 7.76 86.63 0.67 6.27 16 15 O -0.56 -9.68 14.75 16.86 0.25 -9.44 16 16 N -0.71 -2.32 5.21 -443.13 -2.31 -4.63 16 17 C 0.12 0.20 4.33 45.58 0.20 0.40 16 18 H 0.09 0.48 7.46 -2.39 -0.02 0.46 16 19 C -0.14 0.06 7.27 31.18 0.23 0.29 16 20 C -0.08 0.08 3.65 -11.01 -0.04 0.04 16 21 H 0.10 -0.08 6.55 -2.39 -0.02 -0.10 16 22 C -0.07 -0.04 5.29 -19.84 -0.11 -0.14 16 23 C -0.05 -0.11 6.31 22.32 0.14 0.03 16 24 Cl -0.08 -0.18 27.15 -2.72 -0.07 -0.26 16 25 C -0.12 -0.09 9.83 22.29 0.22 0.13 16 26 C -0.12 0.19 10.05 22.26 0.22 0.42 16 27 C -0.12 0.28 10.05 22.27 0.22 0.50 16 28 C -0.11 0.18 8.54 22.26 0.19 0.37 16 29 C -0.13 0.23 7.29 31.12 0.23 0.45 16 30 H 0.07 -0.33 7.66 -2.38 -0.02 -0.35 16 31 H 0.11 -0.32 8.14 -2.39 -0.02 -0.34 16 32 H 0.07 -0.26 7.66 -2.39 -0.02 -0.28 16 33 H 0.17 -0.43 4.50 -2.91 -0.01 -0.45 16 34 H 0.06 -0.39 7.65 -2.38 -0.02 -0.41 16 35 H 0.12 -0.99 8.14 -2.39 -0.02 -1.01 16 36 H 0.07 -0.56 7.65 -2.39 -0.02 -0.58 16 37 H 0.09 -0.08 7.82 -2.39 -0.02 -0.10 16 38 H 0.39 -1.68 8.74 -74.06 -0.65 -2.33 16 39 H -0.28 -0.60 7.11 99.48 0.71 0.11 16 40 H -0.27 -0.42 6.74 99.48 0.67 0.25 16 41 H 0.15 -0.16 3.21 -2.91 -0.01 -0.17 16 42 H 0.41 -0.44 6.72 -92.70 -0.62 -1.07 16 43 H 0.07 0.10 8.14 -2.39 -0.02 0.08 16 44 H 0.11 -0.26 6.39 -2.39 -0.02 -0.27 16 45 H 0.14 -0.20 8.06 -2.91 -0.02 -0.22 16 46 H 0.15 -0.86 8.06 -2.91 -0.02 -0.88 16 47 H 0.15 -0.99 8.06 -2.91 -0.02 -1.01 16 48 H 0.15 -0.76 6.73 -2.91 -0.02 -0.78 16 49 H 0.11 -0.39 7.64 -2.39 -0.02 -0.41 16 50 H 0.08 -0.15 8.14 -2.39 -0.02 -0.17 16 Total: 0.00 -23.40 418.51 1.31 -22.09 By element: Atomic # 1 Polarization: -9.78 SS G_CDS: -0.24 Total: -10.02 kcal Atomic # 6 Polarization: 5.71 SS G_CDS: 5.01 Total: 10.72 kcal Atomic # 7 Polarization: -2.32 SS G_CDS: -2.31 Total: -4.63 kcal Atomic # 8 Polarization: -15.35 SS G_CDS: -3.14 Total: -18.49 kcal Atomic # 14 Polarization: -1.48 SS G_CDS: 2.07 Total: 0.59 kcal Atomic # 17 Polarization: -0.18 SS G_CDS: -0.07 Total: -0.26 kcal Total: -23.40 1.31 -22.09 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10565092_12297780.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -27.721 kcal (2) G-P(sol) polarization free energy of solvation -23.400 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -51.121 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.315 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.086 kcal (6) G-S(sol) free energy of system = (1) + (5) -49.806 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.39 seconds