Wall clock time and date at job start Sat Mar 6 2021 13:12:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86300 * 109.47334 * 2 1 4 4 C 1.50702 * 109.47137 * 239.99871 * 2 1 3 5 5 C 1.37855 * 119.88943 * 300.00293 * 4 2 1 6 6 C 1.39666 * 119.87959 * 179.97438 * 5 4 2 7 7 C 1.47687 * 120.16823 * 179.97438 * 6 5 4 8 8 O 1.21568 * 120.00332 * 180.02562 * 7 6 5 9 9 N 1.34779 * 119.99770 * 0.02562 * 7 6 5 10 10 C 1.46507 * 119.99775 * 179.97438 * 9 7 6 11 11 H 1.08998 * 112.84648 * 334.66652 * 10 9 7 12 12 C 1.53774 * 113.61513 * 105.86274 * 10 9 7 13 13 C 1.54049 * 86.98327 * 89.16059 * 12 10 9 14 14 H 1.09003 * 113.69390 * 270.86857 * 13 12 10 15 15 C 1.50707 * 113.61909 * 139.97947 * 13 12 10 16 16 C 1.38325 * 120.00948 * 142.50553 * 15 13 12 17 17 Cl 1.73603 * 120.01420 * 359.95462 * 16 15 13 18 18 C 1.38370 * 119.97432 * 179.97438 * 16 15 13 19 19 C 1.38193 * 119.98722 * 359.97438 * 18 16 15 20 20 C 1.38257 * 120.01216 * 0.02562 * 19 18 16 21 21 C 1.38219 * 120.02901 * 359.74444 * 20 19 18 22 22 C 1.53775 * 113.61258 * 203.47455 * 10 9 7 23 23 C 1.39822 * 119.66134 * 0.02562 * 6 5 4 24 24 F 1.35106 * 120.10658 * 179.97438 * 23 6 5 25 25 C 1.38322 * 119.78515 * 359.95359 * 23 6 5 26 26 C 1.38204 * 120.11351 * 0.02562 * 25 23 6 27 27 H 0.96695 * 114.00198 * 59.99747 * 1 2 3 28 28 H 1.09005 * 109.47144 * 119.99970 * 2 1 3 29 29 H 1.48497 * 109.99949 * 60.00053 * 3 2 1 30 30 H 1.48502 * 109.99883 * 181.32224 * 3 2 1 31 31 H 1.08005 * 120.06339 * 359.71907 * 5 4 2 32 32 H 0.96992 * 120.00534 * 0.02562 * 9 7 6 33 33 H 1.08996 * 113.61823 * 203.66664 * 12 10 9 34 34 H 1.08997 * 113.61669 * 334.57020 * 12 10 9 35 35 H 1.08011 * 120.00914 * 179.97438 * 18 16 15 36 36 H 1.08004 * 119.99134 * 179.97438 * 19 18 16 37 37 H 1.08006 * 119.98286 * 180.02562 * 20 19 18 38 38 H 1.07997 * 119.99693 * 180.27679 * 21 20 19 39 39 H 1.09003 * 113.62019 * 25.42937 * 22 10 9 40 40 H 1.09005 * 113.61645 * 156.25274 * 22 10 9 41 41 H 1.07993 * 119.94380 * 180.02562 * 25 23 6 42 42 H 1.07994 * 119.82976 * 180.02562 * 26 25 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 1.5969 -2.0303 -1.4463 6 6 2.0621 -2.6883 -2.5870 7 6 1.7081 -4.1024 -2.8244 8 8 2.1151 -4.6724 -3.8180 9 7 0.9339 -4.7609 -1.9393 10 6 0.5823 -6.1635 -2.1750 11 1 0.6061 -6.4341 -3.2306 12 6 1.3392 -7.1489 -1.2692 13 6 0.1902 -6.9754 -0.2578 14 1 0.3434 -6.1543 0.4426 15 6 -0.2136 -8.2577 0.4232 16 6 -0.5762 -8.2476 1.7581 17 17 -0.5653 -6.7581 2.6497 18 6 -0.9473 -9.4253 2.3825 19 6 -0.9560 -10.6107 1.6723 20 6 -0.5934 -10.6202 0.3381 21 6 -0.2272 -9.4433 -0.2875 22 6 -0.7022 -6.6060 -1.4545 23 6 2.8655 -2.0018 -3.5026 24 9 3.3209 -2.6298 -4.6088 25 6 3.1922 -0.6776 -3.2723 26 6 2.7265 -0.0352 -2.1408 27 1 -0.3933 0.4417 -0.7650 28 1 1.7923 -0.5138 0.8900 29 1 1.5616 2.4678 1.2085 30 1 3.5347 1.7702 -0.0322 31 1 0.9796 -2.5557 -0.7326 32 1 0.6088 -4.3061 -1.1467 33 1 1.4096 -8.1554 -1.6816 34 1 2.2967 -6.7682 -0.9138 35 1 -1.2302 -9.4182 3.4249 36 1 -1.2452 -11.5301 2.1597 37 1 -0.6007 -11.5468 -0.2167 38 1 0.0516 -9.4506 -1.3308 39 1 -1.3917 -5.7872 -1.2487 40 1 -1.1898 -7.4635 -1.9184 41 1 3.8123 -0.1448 -3.9780 42 1 2.9841 0.9989 -1.9658 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10565092_12335834.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:12:55 Heat of formation + Delta-G solvation = -32.656986 kcal Electronic energy + Delta-G solvation = -29062.798438 eV Core-core repulsion = 24722.569183 eV Total energy + Delta-G solvation = -4340.229255 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.087 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -49.86308 -41.79385 -40.93881 -39.97263 -38.79041 -37.58607 -37.42297 -34.79143 -32.86073 -32.38548 -31.75345 -31.55096 -26.84247 -26.77492 -26.61922 -25.35020 -23.90127 -23.32147 -22.52638 -21.67580 -20.27477 -19.25875 -18.56419 -18.36274 -18.14026 -17.38275 -17.05517 -16.84690 -16.60591 -16.40535 -16.30823 -15.96586 -15.79958 -15.72716 -15.19336 -15.11476 -14.84749 -14.81061 -14.63793 -14.37198 -14.28737 -13.75962 -13.63715 -13.47833 -13.20905 -13.06718 -12.89457 -12.75026 -12.50840 -12.28484 -12.24192 -11.95762 -11.84335 -11.57211 -11.33382 -11.06928 -10.62158 -10.44152 -10.13973 -9.90919 -9.84994 -9.64206 -5.18822 -0.53470 -0.12296 0.11612 0.20965 1.10821 1.15130 1.47592 1.63788 1.83966 1.92054 2.45607 2.54972 2.99948 3.20476 3.30338 3.34503 3.41410 3.50281 3.50863 3.60151 3.75499 3.84648 3.86075 3.96776 3.98045 4.04968 4.26666 4.27621 4.30074 4.42295 4.55126 4.60389 4.63285 4.63809 4.69410 4.79227 4.81380 4.84071 4.87734 4.92235 5.01099 5.03658 5.20855 5.33590 5.40035 5.50105 5.53167 5.75530 6.34753 6.38619 7.10794 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.538 6.538 2 C -0.067 4.067 3 Si 0.689 3.311 4 C -0.140 4.140 5 C -0.031 4.031 6 C -0.175 4.175 7 C 0.562 3.438 8 O -0.518 6.518 9 N -0.708 5.708 10 C 0.122 3.878 11 H 0.109 0.891 12 C -0.142 4.142 13 C -0.082 4.082 14 H 0.105 0.895 15 C -0.062 4.062 16 C -0.033 4.033 17 Cl -0.068 7.068 18 C -0.108 4.108 19 C -0.111 4.111 20 C -0.111 4.111 21 C -0.106 4.106 22 C -0.133 4.133 23 C 0.167 3.833 24 F -0.111 7.111 25 C -0.156 4.156 26 C -0.060 4.060 27 H 0.381 0.619 28 H 0.118 0.882 29 H -0.252 1.252 30 H -0.255 1.255 31 H 0.139 0.861 32 H 0.401 0.599 33 H 0.097 0.903 34 H 0.076 0.924 35 H 0.133 0.867 36 H 0.132 0.868 37 H 0.130 0.870 38 H 0.133 0.867 39 H 0.079 0.921 40 H 0.101 0.899 41 H 0.150 0.850 42 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.188 1.901 0.927 3.043 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.178 4.178 3 Si 0.590 3.410 4 C -0.141 4.141 5 C -0.050 4.050 6 C -0.179 4.179 7 C 0.349 3.651 8 O -0.393 6.393 9 N -0.360 5.360 10 C 0.016 3.984 11 H 0.127 0.873 12 C -0.181 4.181 13 C -0.100 4.100 14 H 0.123 0.877 15 C -0.062 4.062 16 C -0.060 4.060 17 Cl -0.039 7.039 18 C -0.127 4.127 19 C -0.129 4.129 20 C -0.129 4.129 21 C -0.124 4.124 22 C -0.171 4.171 23 C 0.147 3.853 24 F -0.088 7.088 25 C -0.175 4.175 26 C -0.078 4.078 27 H 0.229 0.771 28 H 0.135 0.865 29 H -0.176 1.176 30 H -0.180 1.180 31 H 0.156 0.844 32 H 0.237 0.763 33 H 0.116 0.884 34 H 0.095 0.905 35 H 0.151 0.849 36 H 0.150 0.850 37 H 0.148 0.852 38 H 0.151 0.849 39 H 0.098 0.902 40 H 0.119 0.881 41 H 0.168 0.832 42 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -1.305 1.874 1.215 2.587 hybrid contribution 0.032 -0.462 0.617 0.771 sum -1.273 1.412 1.831 2.640 Atomic orbital electron populations 1.86520 1.16769 1.81648 1.49425 1.25051 0.85487 1.10267 0.96974 0.94751 0.81025 0.77535 0.87682 1.20334 1.00609 0.94977 0.98168 1.21022 0.95731 0.93681 0.94544 1.20051 1.04672 0.95163 0.97989 1.17955 0.78571 0.85542 0.83013 1.90873 1.52458 1.68453 1.27549 1.45544 1.52496 1.12166 1.25799 1.21849 0.95373 0.80296 1.00848 0.87343 1.23615 0.97904 1.00443 0.96096 1.21793 0.97269 0.95114 0.95812 0.87703 1.19550 0.99189 0.95727 0.91777 1.20862 1.04761 0.87848 0.92523 1.98373 1.97040 1.33613 1.74887 1.21107 0.99842 0.91058 1.00709 1.21174 0.99504 0.97727 0.94534 1.21296 0.98208 0.98448 0.94987 1.21018 0.99763 0.91360 1.00272 1.23406 0.96050 1.02314 0.95281 1.17749 0.93639 0.90555 0.83385 1.91635 1.85991 1.82073 1.49143 1.21172 1.03433 0.92966 0.99920 1.21102 0.94645 0.99679 0.92363 0.77130 0.86462 1.17636 1.18000 0.84366 0.76300 0.88432 0.90507 0.84872 0.84989 0.85198 0.84903 0.90205 0.88082 0.83209 0.84097 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 1.10 12.76 -35.23 -0.45 0.65 16 2 C -0.07 0.17 2.82 36.01 0.10 0.27 16 3 Si 0.69 -2.01 29.78 -169.99 -5.06 -7.07 16 4 C -0.14 0.28 5.39 -104.68 -0.56 -0.28 16 5 C -0.03 0.04 9.09 -39.19 -0.36 -0.32 16 6 C -0.17 -0.22 5.88 -104.91 -0.62 -0.84 16 7 C 0.56 1.61 7.77 -12.40 -0.10 1.52 16 8 O -0.52 -3.54 14.96 5.31 0.08 -3.46 16 9 N -0.71 0.09 5.21 -54.01 -0.28 -0.19 16 10 C 0.12 -0.04 4.29 -67.12 -0.29 -0.33 16 11 H 0.11 0.11 7.50 -51.93 -0.39 -0.27 16 12 C -0.14 0.10 7.27 -25.78 -0.19 -0.09 16 13 C -0.08 0.08 3.66 -90.81 -0.33 -0.25 16 14 H 0.10 -0.08 6.57 -51.93 -0.34 -0.42 16 15 C -0.06 -0.01 5.29 -104.59 -0.55 -0.56 16 16 C -0.03 -0.03 6.31 -39.50 -0.25 -0.28 16 17 Cl -0.07 -0.07 27.16 -51.86 -1.41 -1.48 16 18 C -0.11 -0.03 9.83 -39.55 -0.39 -0.42 16 19 C -0.11 0.06 10.05 -39.59 -0.40 -0.33 16 20 C -0.11 0.10 10.05 -39.58 -0.40 -0.30 16 21 C -0.11 0.07 8.60 -39.59 -0.34 -0.27 16 22 C -0.13 0.23 7.28 -25.92 -0.19 0.04 16 23 C 0.17 0.32 7.29 -38.96 -0.28 0.03 16 24 F -0.11 -0.52 15.55 2.25 0.04 -0.48 16 25 C -0.16 0.16 10.01 -39.56 -0.40 -0.24 16 26 C -0.06 0.14 8.66 -39.51 -0.34 -0.20 16 27 H 0.38 -2.18 8.70 45.56 0.40 -1.78 16 28 H 0.12 -0.26 7.96 -51.93 -0.41 -0.67 16 29 H -0.25 -0.17 7.11 56.52 0.40 0.23 16 30 H -0.26 0.17 7.11 56.52 0.40 0.57 16 31 H 0.14 -0.40 6.41 -52.48 -0.34 -0.73 16 32 H 0.40 -0.94 6.74 -40.82 -0.27 -1.21 16 33 H 0.10 -0.14 6.33 -51.93 -0.33 -0.47 16 34 H 0.08 0.03 8.14 -51.93 -0.42 -0.39 16 35 H 0.13 -0.11 8.06 -52.48 -0.42 -0.54 16 36 H 0.13 -0.32 8.06 -52.48 -0.42 -0.75 16 37 H 0.13 -0.35 8.06 -52.48 -0.42 -0.77 16 38 H 0.13 -0.31 6.68 -52.49 -0.35 -0.66 16 39 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 40 H 0.10 -0.22 7.72 -51.93 -0.40 -0.62 16 41 H 0.15 -0.44 8.06 -52.49 -0.42 -0.86 16 42 H 0.14 -0.65 4.86 -52.49 -0.25 -0.91 16 LS Contribution 367.15 15.07 5.53 5.53 Total: 0.00 -8.35 367.15 -11.86 -20.21 By element: Atomic # 1 Polarization: -6.42 SS G_CDS: -4.43 Total: -10.85 kcal Atomic # 6 Polarization: 3.01 SS G_CDS: -5.88 Total: -2.87 kcal Atomic # 7 Polarization: 0.09 SS G_CDS: -0.28 Total: -0.19 kcal Atomic # 8 Polarization: -2.44 SS G_CDS: -0.37 Total: -2.81 kcal Atomic # 9 Polarization: -0.52 SS G_CDS: 0.04 Total: -0.48 kcal Atomic # 14 Polarization: -2.01 SS G_CDS: -5.06 Total: -7.07 kcal Atomic # 17 Polarization: -0.07 SS G_CDS: -1.41 Total: -1.48 kcal Total LS contribution 5.53 Total: 5.53 kcal Total: -8.35 -11.86 -20.21 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10565092_12335834.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -12.446 kcal (2) G-P(sol) polarization free energy of solvation -8.351 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -20.797 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.860 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.211 kcal (6) G-S(sol) free energy of system = (1) + (5) -32.657 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.94 seconds