Wall clock time and date at job start Sat Mar 6 2021 13:12:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86300 * 109.47334 * 2 1 4 4 C 1.50702 * 109.47137 * 239.99871 * 2 1 3 5 5 C 1.37855 * 119.88943 * 300.00293 * 4 2 1 6 6 C 1.39666 * 119.87959 * 179.97438 * 5 4 2 7 7 C 1.47687 * 120.16823 * 179.97438 * 6 5 4 8 8 O 1.21568 * 120.00332 * 180.02562 * 7 6 5 9 9 N 1.34779 * 119.99770 * 0.02562 * 7 6 5 10 10 C 1.46507 * 119.99775 * 179.97438 * 9 7 6 11 11 H 1.08998 * 112.84648 * 334.66652 * 10 9 7 12 12 C 1.53774 * 113.61513 * 105.86274 * 10 9 7 13 13 C 1.54049 * 86.98327 * 89.16059 * 12 10 9 14 14 H 1.09003 * 113.69390 * 270.86857 * 13 12 10 15 15 C 1.50707 * 113.61909 * 139.97947 * 13 12 10 16 16 C 1.38325 * 120.00948 * 142.50553 * 15 13 12 17 17 Cl 1.73603 * 120.01420 * 359.95462 * 16 15 13 18 18 C 1.38370 * 119.97432 * 179.97438 * 16 15 13 19 19 C 1.38193 * 119.98722 * 359.97438 * 18 16 15 20 20 C 1.38257 * 120.01216 * 0.02562 * 19 18 16 21 21 C 1.38219 * 120.02901 * 359.74444 * 20 19 18 22 22 C 1.53775 * 113.61258 * 203.47455 * 10 9 7 23 23 C 1.39822 * 119.66134 * 0.02562 * 6 5 4 24 24 F 1.35106 * 120.10658 * 179.97438 * 23 6 5 25 25 C 1.38322 * 119.78515 * 359.95359 * 23 6 5 26 26 C 1.38204 * 120.11351 * 0.02562 * 25 23 6 27 27 H 0.96695 * 114.00198 * 59.99747 * 1 2 3 28 28 H 1.09005 * 109.47144 * 119.99970 * 2 1 3 29 29 H 1.48497 * 109.99949 * 60.00053 * 3 2 1 30 30 H 1.48502 * 109.99883 * 181.32224 * 3 2 1 31 31 H 1.08005 * 120.06339 * 359.71907 * 5 4 2 32 32 H 0.96992 * 120.00534 * 0.02562 * 9 7 6 33 33 H 1.08996 * 113.61823 * 203.66664 * 12 10 9 34 34 H 1.08997 * 113.61669 * 334.57020 * 12 10 9 35 35 H 1.08011 * 120.00914 * 179.97438 * 18 16 15 36 36 H 1.08004 * 119.99134 * 179.97438 * 19 18 16 37 37 H 1.08006 * 119.98286 * 180.02562 * 20 19 18 38 38 H 1.07997 * 119.99693 * 180.27679 * 21 20 19 39 39 H 1.09003 * 113.62019 * 25.42937 * 22 10 9 40 40 H 1.09005 * 113.61645 * 156.25274 * 22 10 9 41 41 H 1.07993 * 119.94380 * 180.02562 * 25 23 6 42 42 H 1.07994 * 119.82976 * 180.02562 * 26 25 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 1.5969 -2.0303 -1.4463 6 6 2.0621 -2.6883 -2.5870 7 6 1.7081 -4.1024 -2.8244 8 8 2.1151 -4.6724 -3.8180 9 7 0.9339 -4.7609 -1.9393 10 6 0.5823 -6.1635 -2.1750 11 1 0.6061 -6.4341 -3.2306 12 6 1.3392 -7.1489 -1.2692 13 6 0.1902 -6.9754 -0.2578 14 1 0.3434 -6.1543 0.4426 15 6 -0.2136 -8.2577 0.4232 16 6 -0.5762 -8.2476 1.7581 17 17 -0.5653 -6.7581 2.6497 18 6 -0.9473 -9.4253 2.3825 19 6 -0.9560 -10.6107 1.6723 20 6 -0.5934 -10.6202 0.3381 21 6 -0.2272 -9.4433 -0.2875 22 6 -0.7022 -6.6060 -1.4545 23 6 2.8655 -2.0018 -3.5026 24 9 3.3209 -2.6298 -4.6088 25 6 3.1922 -0.6776 -3.2723 26 6 2.7265 -0.0352 -2.1408 27 1 -0.3933 0.4417 -0.7650 28 1 1.7923 -0.5138 0.8900 29 1 1.5616 2.4678 1.2085 30 1 3.5347 1.7702 -0.0322 31 1 0.9796 -2.5557 -0.7326 32 1 0.6088 -4.3061 -1.1467 33 1 1.4096 -8.1554 -1.6816 34 1 2.2967 -6.7682 -0.9138 35 1 -1.2302 -9.4182 3.4249 36 1 -1.2452 -11.5301 2.1597 37 1 -0.6007 -11.5468 -0.2167 38 1 0.0516 -9.4506 -1.3308 39 1 -1.3917 -5.7872 -1.2487 40 1 -1.1898 -7.4635 -1.9184 41 1 3.8123 -0.1448 -3.9780 42 1 2.9841 0.9989 -1.9658 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10565092_12335834.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:12:54 Heat of formation + Delta-G solvation = -28.742622 kcal Electronic energy + Delta-G solvation = -29062.628698 eV Core-core repulsion = 24722.569183 eV Total energy + Delta-G solvation = -4340.059515 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.087 amu Computer time = 1.04 seconds Orbital eigenvalues (eV) -50.02817 -41.82563 -40.90148 -39.96755 -38.83023 -37.44796 -37.43120 -34.90494 -32.81876 -32.30182 -31.68751 -31.50763 -26.78524 -26.68222 -26.58105 -25.32326 -23.84102 -23.26521 -22.49270 -21.72670 -20.27100 -19.25045 -18.55302 -18.29088 -18.11930 -17.35454 -17.05404 -16.95001 -16.62469 -16.37667 -16.19942 -15.94568 -15.86712 -15.69421 -15.17880 -15.03671 -14.79924 -14.76314 -14.59674 -14.40893 -14.30341 -13.66385 -13.59778 -13.43286 -13.18996 -12.99371 -12.88055 -12.70931 -12.50156 -12.18817 -12.16362 -11.87116 -11.82535 -11.56213 -11.30379 -11.24242 -10.49881 -10.43585 -10.16549 -9.86053 -9.82625 -9.60536 -4.97443 -0.52583 -0.05259 0.16150 0.26812 1.14712 1.30198 1.56154 1.66026 1.87172 2.01259 2.44796 2.61026 3.02505 3.32875 3.34750 3.43898 3.55350 3.56121 3.62612 3.65520 3.82459 3.91580 3.98668 4.06907 4.08793 4.14262 4.36671 4.38005 4.42402 4.53668 4.58233 4.68828 4.72391 4.73990 4.75336 4.83682 4.86127 4.92925 4.93668 4.98209 5.06548 5.12035 5.27936 5.36769 5.47398 5.53546 5.57796 5.84856 6.29781 6.78353 6.99298 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.552 6.552 2 C -0.069 4.069 3 Si 0.773 3.227 4 C -0.134 4.134 5 C -0.026 4.026 6 C -0.188 4.188 7 C 0.557 3.443 8 O -0.568 6.568 9 N -0.694 5.694 10 C 0.116 3.884 11 H 0.093 0.907 12 C -0.139 4.139 13 C -0.076 4.076 14 H 0.103 0.897 15 C -0.070 4.070 16 C -0.050 4.050 17 Cl -0.076 7.076 18 C -0.121 4.121 19 C -0.117 4.117 20 C -0.116 4.116 21 C -0.111 4.111 22 C -0.120 4.120 23 C 0.135 3.865 24 F -0.136 7.136 25 C -0.151 4.151 26 C -0.051 4.051 27 H 0.397 0.603 28 H 0.117 0.883 29 H -0.303 1.303 30 H -0.280 1.280 31 H 0.154 0.846 32 H 0.413 0.587 33 H 0.106 0.894 34 H 0.064 0.936 35 H 0.139 0.861 36 H 0.150 0.850 37 H 0.149 0.851 38 H 0.148 0.852 39 H 0.086 0.914 40 H 0.110 0.890 41 H 0.169 0.831 42 H 0.168 0.832 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.812 2.388 1.488 3.978 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.360 6.360 2 C -0.179 4.179 3 Si 0.679 3.321 4 C -0.134 4.134 5 C -0.045 4.045 6 C -0.192 4.192 7 C 0.346 3.654 8 O -0.447 6.447 9 N -0.346 5.346 10 C 0.011 3.989 11 H 0.111 0.889 12 C -0.177 4.177 13 C -0.094 4.094 14 H 0.121 0.879 15 C -0.071 4.071 16 C -0.076 4.076 17 Cl -0.047 7.047 18 C -0.140 4.140 19 C -0.135 4.135 20 C -0.133 4.133 21 C -0.129 4.129 22 C -0.158 4.158 23 C 0.114 3.886 24 F -0.114 7.114 25 C -0.169 4.169 26 C -0.068 4.068 27 H 0.248 0.752 28 H 0.134 0.866 29 H -0.231 1.231 30 H -0.206 1.206 31 H 0.171 0.829 32 H 0.251 0.749 33 H 0.124 0.876 34 H 0.083 0.917 35 H 0.157 0.843 36 H 0.167 0.833 37 H 0.167 0.833 38 H 0.165 0.835 39 H 0.105 0.895 40 H 0.128 0.872 41 H 0.186 0.814 42 H 0.185 0.815 Dipole moment (debyes) X Y Z Total from point charges -1.965 2.354 1.788 3.549 hybrid contribution 0.198 -0.591 0.540 0.825 sum -1.767 1.763 2.327 3.413 Atomic orbital electron populations 1.86494 1.16746 1.82069 1.50679 1.25141 0.85606 1.10588 0.96528 0.93797 0.78041 0.74916 0.85298 1.20473 1.00085 0.94589 0.98284 1.21160 0.95468 0.94094 0.93790 1.20032 1.05666 0.94468 0.99071 1.18304 0.78246 0.86265 0.82608 1.90838 1.54625 1.69625 1.29651 1.45471 1.51325 1.12253 1.25514 1.21890 0.96650 0.80204 1.00193 0.88937 1.23604 0.97402 1.00663 0.96057 1.21727 0.97128 0.94834 0.95735 0.87913 1.19686 0.99388 0.96340 0.91688 1.21037 1.05787 0.87854 0.92965 1.98362 1.97137 1.34088 1.75095 1.21302 1.00142 0.91301 1.01250 1.21449 0.99130 0.98082 0.94815 1.21598 0.97486 0.99172 0.95088 1.21258 0.99468 0.91195 1.01013 1.23362 0.95358 1.02717 0.94342 1.18196 0.95151 0.91886 0.83341 1.91564 1.86570 1.82765 1.50509 1.21399 1.03124 0.91762 1.00617 1.21388 0.93443 1.00685 0.91313 0.75219 0.86606 1.23073 1.20628 0.82853 0.74917 0.87615 0.91711 0.84317 0.83278 0.83322 0.83471 0.89533 0.87198 0.81369 0.81479 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 3.07 12.76 -148.98 -1.90 1.17 16 2 C -0.07 0.43 2.82 71.24 0.20 0.63 16 3 Si 0.77 -5.42 29.78 68.60 2.04 -3.38 16 4 C -0.13 0.69 5.39 -19.90 -0.11 0.58 16 5 C -0.03 0.07 9.09 22.52 0.20 0.28 16 6 C -0.19 -0.68 5.88 -20.05 -0.12 -0.80 16 7 C 0.56 4.25 7.77 86.74 0.67 4.93 16 8 O -0.57 -9.44 14.96 -3.93 -0.06 -9.50 16 9 N -0.69 -0.55 5.21 -443.07 -2.31 -2.86 16 10 C 0.12 0.04 4.29 45.51 0.20 0.23 16 11 H 0.09 0.37 7.50 -2.39 -0.02 0.35 16 12 C -0.14 0.08 7.27 31.21 0.23 0.31 16 13 C -0.08 0.13 3.66 -10.92 -0.04 0.09 16 14 H 0.10 -0.13 6.57 -2.39 -0.02 -0.15 16 15 C -0.07 -0.02 5.29 -19.84 -0.11 -0.12 16 16 C -0.05 -0.11 6.31 22.32 0.14 0.03 16 17 Cl -0.08 -0.18 27.16 -2.72 -0.07 -0.26 16 18 C -0.12 -0.08 9.83 22.29 0.22 0.14 16 19 C -0.12 0.20 10.05 22.26 0.22 0.43 16 20 C -0.12 0.30 10.05 22.27 0.22 0.52 16 21 C -0.11 0.21 8.60 22.27 0.19 0.40 16 22 C -0.12 0.42 7.28 31.12 0.23 0.64 16 23 C 0.13 0.69 7.29 22.67 0.17 0.85 16 24 F -0.14 -1.63 15.55 44.97 0.70 -0.93 16 25 C -0.15 0.36 10.01 22.28 0.22 0.58 16 26 C -0.05 0.32 8.66 22.31 0.19 0.51 16 27 H 0.40 -5.26 8.70 -74.06 -0.64 -5.91 16 28 H 0.12 -0.65 7.96 -2.38 -0.02 -0.67 16 29 H -0.30 -0.54 7.11 99.48 0.71 0.17 16 30 H -0.28 0.76 7.11 99.48 0.71 1.47 16 31 H 0.15 -0.99 6.41 -2.91 -0.02 -1.01 16 32 H 0.41 -1.81 6.74 -92.71 -0.62 -2.44 16 33 H 0.11 -0.25 6.33 -2.39 -0.02 -0.27 16 34 H 0.06 0.13 8.14 -2.39 -0.02 0.11 16 35 H 0.14 -0.20 8.06 -2.91 -0.02 -0.22 16 36 H 0.15 -0.88 8.06 -2.91 -0.02 -0.90 16 37 H 0.15 -1.01 8.06 -2.91 -0.02 -1.04 16 38 H 0.15 -0.80 6.68 -2.91 -0.02 -0.82 16 39 H 0.09 -0.39 8.14 -2.39 -0.02 -0.41 16 40 H 0.11 -0.54 7.72 -2.38 -0.02 -0.56 16 41 H 0.17 -1.12 8.06 -2.91 -0.02 -1.14 16 42 H 0.17 -1.97 4.86 -2.91 -0.01 -1.99 16 Total: 0.00 -22.15 367.15 1.21 -20.94 By element: Atomic # 1 Polarization: -15.29 SS G_CDS: -0.13 Total: -15.41 kcal Atomic # 6 Polarization: 7.30 SS G_CDS: 2.94 Total: 10.23 kcal Atomic # 7 Polarization: -0.55 SS G_CDS: -2.31 Total: -2.86 kcal Atomic # 8 Polarization: -6.37 SS G_CDS: -1.96 Total: -8.33 kcal Atomic # 9 Polarization: -1.63 SS G_CDS: 0.70 Total: -0.93 kcal Atomic # 14 Polarization: -5.42 SS G_CDS: 2.04 Total: -3.38 kcal Atomic # 17 Polarization: -0.18 SS G_CDS: -0.07 Total: -0.26 kcal Total: -22.15 1.21 -20.94 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10565092_12335834.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -7.804 kcal (2) G-P(sol) polarization free energy of solvation -22.149 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -29.953 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.211 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.938 kcal (6) G-S(sol) free energy of system = (1) + (5) -28.743 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.04 seconds