Wall clock time and date at job start Sat Mar 6 2021 13:12:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86297 * 109.47038 * 2 1 4 4 C 1.50695 * 109.47344 * 239.99999 * 2 1 3 5 5 C 1.38235 * 120.00212 * 300.00330 * 4 2 1 6 6 C 1.38231 * 120.00451 * 179.97438 * 5 4 2 7 7 C 1.38234 * 120.00036 * 0.02562 * 6 5 4 8 8 C 1.50703 * 120.00368 * 179.97438 * 7 6 5 9 9 C 1.50702 * 109.46820 * 90.00195 * 8 7 6 10 10 O 1.21284 * 119.99973 * 359.97438 * 9 8 7 11 11 N 1.34774 * 119.99595 * 180.02562 * 9 8 7 12 12 C 1.46503 * 119.99780 * 180.02562 * 11 9 8 13 13 H 1.09001 * 112.85030 * 336.19261 * 12 11 9 14 14 C 1.53959 * 113.61669 * 107.46012 * 12 11 9 15 15 C 1.53784 * 87.01671 * 89.19851 * 14 12 11 16 16 H 1.09000 * 113.61493 * 270.77459 * 15 14 12 17 17 C 1.50695 * 113.61197 * 139.95118 * 15 14 12 18 18 C 1.38337 * 120.00653 * 140.86801 * 17 15 14 19 19 Cl 1.73595 * 120.01149 * 0.29543 * 18 17 15 20 20 C 1.38375 * 119.97350 * 180.02562 * 18 17 15 21 21 C 1.38188 * 119.98842 * 359.97438 * 20 18 17 22 22 C 1.38270 * 120.01173 * 0.02562 * 21 20 18 23 23 C 1.38214 * 120.02795 * 359.97438 * 22 21 20 24 24 C 1.53775 * 113.61697 * 204.99708 * 12 11 9 25 25 C 1.38238 * 119.99698 * 0.25369 * 7 6 5 26 26 C 1.38229 * 119.99999 * 359.49533 * 25 7 6 27 27 H 0.96700 * 113.99795 * 299.99990 * 1 2 3 28 28 H 1.08999 * 109.46896 * 120.00030 * 2 1 3 29 29 H 1.48500 * 110.00237 * 299.99792 * 3 2 1 30 30 H 1.48500 * 110.00320 * 61.32162 * 3 2 1 31 31 H 1.08008 * 119.99552 * 359.97438 * 5 4 2 32 32 H 1.08003 * 119.99834 * 179.97438 * 6 5 4 33 33 H 1.09001 * 109.46515 * 330.00358 * 8 7 6 34 34 H 1.08988 * 109.47144 * 210.00344 * 8 7 6 35 35 H 0.96996 * 120.00310 * 359.97438 * 11 9 8 36 36 H 1.09000 * 113.66538 * 334.67434 * 14 12 11 37 37 H 1.08993 * 113.61397 * 203.71989 * 14 12 11 38 38 H 1.08002 * 120.00559 * 179.97438 * 20 18 17 39 39 H 1.08002 * 119.99517 * 180.02562 * 21 20 18 40 40 H 1.08005 * 119.98265 * 179.97438 * 22 21 20 41 41 H 1.08000 * 119.99115 * 180.02562 * 23 22 21 42 42 H 1.09001 * 113.62119 * 156.24813 * 24 12 11 43 43 H 1.09009 * 113.61136 * 25.34523 * 24 12 11 44 44 H 1.08003 * 119.99691 * 179.71853 * 25 7 6 45 45 H 1.08006 * 120.00402 * 180.25333 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 1.5975 -2.0338 -1.4492 6 6 2.0578 -2.6853 -2.5781 7 6 2.8526 -2.0136 -3.4880 8 6 3.3550 -2.7240 -4.7185 9 6 2.3624 -2.5505 -5.8391 10 8 1.3468 -1.9132 -5.6564 11 7 2.6029 -3.1044 -7.0440 12 6 1.6382 -2.9353 -8.1335 13 1 0.6294 -2.7268 -7.7772 14 6 2.1155 -1.9724 -9.2360 15 6 2.7501 -3.1959 -9.9181 16 1 3.7729 -3.3932 -9.5971 17 6 2.5964 -3.1984 -11.4172 18 6 3.6381 -3.6297 -12.2187 19 17 5.1200 -4.1753 -11.4977 20 6 3.4964 -3.6313 -13.5952 21 6 2.3143 -3.2027 -14.1684 22 6 1.2734 -2.7717 -13.3667 23 6 1.4143 -2.7699 -11.9918 24 6 1.7000 -4.0513 -9.1897 25 6 3.1914 -0.6918 -3.2663 26 6 2.7267 -0.0388 -2.1401 27 1 -0.3933 0.4417 0.7651 28 1 1.7923 -0.5138 0.8900 29 1 1.5615 2.4679 -1.2085 30 1 1.5880 2.4586 1.2242 31 1 0.9768 -2.5588 -0.7381 32 1 1.7972 -3.7194 -2.7488 33 1 3.4760 -3.7852 -4.5013 34 1 4.3152 -2.3020 -5.0150 35 1 3.4149 -3.6144 -7.1900 36 1 2.8436 -1.2384 -8.8907 37 1 1.3021 -1.5264 -9.8082 38 1 4.3095 -3.9675 -14.2215 39 1 2.2034 -3.2042 -15.2427 40 1 0.3499 -2.4364 -13.8152 41 1 0.6008 -2.4335 -11.3662 42 1 0.7728 -4.1747 -9.7494 43 1 2.0932 -4.9932 -8.8072 44 1 3.8161 -0.1683 -3.9749 45 1 2.9880 0.9951 -1.9688 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10565092_12335836.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:12:58 Heat of formation + Delta-G solvation = 3.752843 kcal Electronic energy + Delta-G solvation = -27756.741491 eV Core-core repulsion = 23732.007442 eV Total energy + Delta-G solvation = -4024.734050 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.112 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -41.68787 -40.81393 -40.00344 -38.81287 -37.64705 -37.42828 -34.58071 -34.04431 -31.90160 -31.82762 -31.75247 -29.74142 -26.81922 -26.50035 -25.46128 -23.82451 -23.71520 -22.79644 -22.16977 -21.28280 -20.19360 -18.57237 -18.48139 -17.93210 -17.56147 -17.04050 -16.87449 -16.63907 -16.46529 -16.11364 -15.90562 -15.33283 -15.13491 -15.12620 -14.83852 -14.80268 -14.57603 -14.40958 -14.28484 -13.84632 -13.66274 -13.48712 -13.31097 -13.16244 -13.02126 -12.90351 -12.74700 -12.50546 -12.24120 -12.14514 -11.85602 -11.80927 -11.63160 -11.56432 -11.31678 -10.85830 -10.45488 -10.08144 -9.89918 -9.75559 -9.64090 -9.50092 -4.92771 0.11483 0.20926 0.33191 0.57495 1.14586 1.33088 1.63913 1.67213 2.01600 2.09404 2.54841 2.81248 3.34153 3.40794 3.51579 3.59097 3.64487 3.76503 3.85142 3.87907 3.93425 3.97064 4.00254 4.05668 4.11213 4.25528 4.28347 4.30348 4.40816 4.48218 4.56761 4.57847 4.61902 4.63958 4.77770 4.78661 4.83203 4.88110 4.93407 5.04313 5.09213 5.17002 5.20828 5.35545 5.40468 5.47627 5.57661 5.65751 5.67408 5.75480 6.09026 6.47486 6.49164 7.26198 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.535 6.535 2 C -0.076 4.076 3 Si 0.681 3.319 4 C -0.073 4.073 5 C -0.090 4.090 6 C -0.104 4.104 7 C -0.064 4.064 8 C -0.103 4.103 9 C 0.516 3.484 10 O -0.524 6.524 11 N -0.716 5.716 12 C 0.121 3.879 13 H 0.106 0.894 14 C -0.142 4.142 15 C -0.081 4.081 16 H 0.105 0.895 17 C -0.062 4.062 18 C -0.033 4.033 19 Cl -0.068 7.068 20 C -0.109 4.109 21 C -0.111 4.111 22 C -0.111 4.111 23 C -0.106 4.106 24 C -0.134 4.134 25 C -0.099 4.099 26 C -0.112 4.112 27 H 0.379 0.621 28 H 0.076 0.924 29 H -0.255 1.255 30 H -0.262 1.262 31 H 0.124 0.876 32 H 0.122 0.878 33 H 0.105 0.895 34 H 0.106 0.894 35 H 0.402 0.598 36 H 0.076 0.924 37 H 0.095 0.905 38 H 0.133 0.867 39 H 0.132 0.868 40 H 0.130 0.870 41 H 0.133 0.867 42 H 0.098 0.902 43 H 0.078 0.922 44 H 0.125 0.875 45 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.722 -1.935 -0.930 4.296 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.342 6.342 2 C -0.186 4.186 3 Si 0.582 3.418 4 C -0.073 4.073 5 C -0.108 4.108 6 C -0.122 4.122 7 C -0.065 4.065 8 C -0.143 4.143 9 C 0.303 3.697 10 O -0.398 6.398 11 N -0.369 5.369 12 C 0.016 3.984 13 H 0.124 0.876 14 C -0.181 4.181 15 C -0.099 4.099 16 H 0.123 0.877 17 C -0.062 4.062 18 C -0.060 4.060 19 Cl -0.039 7.039 20 C -0.127 4.127 21 C -0.130 4.130 22 C -0.129 4.129 23 C -0.124 4.124 24 C -0.172 4.172 25 C -0.117 4.117 26 C -0.130 4.130 27 H 0.226 0.774 28 H 0.094 0.906 29 H -0.180 1.180 30 H -0.187 1.187 31 H 0.142 0.858 32 H 0.140 0.860 33 H 0.124 0.876 34 H 0.124 0.876 35 H 0.236 0.764 36 H 0.094 0.906 37 H 0.113 0.887 38 H 0.151 0.849 39 H 0.150 0.850 40 H 0.148 0.852 41 H 0.150 0.850 42 H 0.117 0.883 43 H 0.097 0.903 44 H 0.143 0.857 45 H 0.144 0.856 Dipole moment (debyes) X Y Z Total from point charges 2.989 -0.988 -1.268 3.394 hybrid contribution -0.560 -0.494 0.281 0.798 sum 2.429 -1.482 -0.986 3.011 Atomic orbital electron populations 1.86611 1.17824 1.80086 1.49689 1.24808 0.84455 1.10922 0.98371 0.95160 0.91689 0.74741 0.80218 1.19233 0.98247 0.94381 0.95418 1.20925 0.98399 0.93968 0.97476 1.20990 0.97077 1.00020 0.94084 1.19248 0.98293 0.94267 0.94668 1.20689 0.98850 1.03008 0.91711 1.20612 0.87418 0.78712 0.83000 1.90772 1.27625 1.39273 1.82165 1.45701 1.24439 1.55772 1.10938 1.21843 0.94247 0.96292 0.86068 0.87622 1.23587 1.01185 0.96417 0.96872 1.21737 1.00511 0.97980 0.89673 0.87656 1.19568 0.92805 0.98677 0.95195 1.20862 0.88534 1.03367 0.93241 1.98369 1.33617 1.88282 1.83661 1.21105 0.98808 1.00089 0.92718 1.21174 0.92724 0.98581 1.00476 1.21298 0.99246 0.98779 0.93623 1.21013 0.96796 0.99554 0.95068 1.23411 0.99727 0.97647 0.96379 1.20875 1.00071 0.93775 0.96995 1.20867 0.98618 0.99177 0.94321 0.77351 0.90607 1.17969 1.18726 0.85784 0.85976 0.87631 0.87586 0.76392 0.90564 0.88687 0.84873 0.84995 0.85219 0.84958 0.88344 0.90312 0.85698 0.85591 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -1.40 12.74 -35.23 -0.45 -1.85 16 2 C -0.08 -0.09 2.81 36.00 0.10 0.01 16 3 Si 0.68 0.13 29.79 -169.99 -5.06 -4.94 16 4 C -0.07 -0.20 5.42 -104.63 -0.57 -0.76 16 5 C -0.09 -0.25 9.61 -39.59 -0.38 -0.63 16 6 C -0.10 -0.21 9.70 -39.59 -0.38 -0.60 16 7 C -0.06 -0.09 4.37 -104.62 -0.46 -0.55 16 8 C -0.10 0.14 5.83 -29.03 -0.17 -0.03 16 9 C 0.52 0.64 7.82 -10.99 -0.09 0.56 16 10 O -0.52 -3.18 15.63 5.55 0.09 -3.09 16 11 N -0.72 0.89 5.26 -52.93 -0.28 0.61 16 12 C 0.12 -0.08 4.33 -67.03 -0.29 -0.37 16 13 H 0.11 0.13 7.46 -51.93 -0.39 -0.25 16 14 C -0.14 0.13 7.27 -25.82 -0.19 -0.06 16 15 C -0.08 0.10 3.65 -90.96 -0.33 -0.23 16 16 H 0.11 -0.14 6.55 -51.93 -0.34 -0.48 16 17 C -0.06 0.00 5.29 -104.59 -0.55 -0.55 16 18 C -0.03 -0.02 6.31 -39.49 -0.25 -0.27 16 19 Cl -0.07 -0.04 27.15 -51.86 -1.41 -1.45 16 20 C -0.11 -0.02 9.83 -39.55 -0.39 -0.40 16 21 C -0.11 0.07 10.05 -39.59 -0.40 -0.32 16 22 C -0.11 0.10 10.05 -39.58 -0.40 -0.30 16 23 C -0.11 0.07 8.54 -39.59 -0.34 -0.26 16 24 C -0.13 0.25 7.29 -25.92 -0.19 0.06 16 25 C -0.10 -0.16 9.70 -39.58 -0.38 -0.54 16 26 C -0.11 -0.22 8.67 -39.58 -0.34 -0.57 16 27 H 0.38 -0.60 8.74 45.56 0.40 -0.20 16 28 H 0.08 -0.06 7.96 -51.93 -0.41 -0.47 16 29 H -0.26 -0.94 7.11 56.52 0.40 -0.54 16 30 H -0.26 -0.52 7.11 56.52 0.40 -0.12 16 31 H 0.12 0.24 8.06 -52.48 -0.42 -0.18 16 32 H 0.12 0.04 8.06 -52.48 -0.42 -0.38 16 33 H 0.11 -0.37 8.09 -51.93 -0.42 -0.79 16 34 H 0.11 -0.39 8.08 -51.94 -0.42 -0.81 16 35 H 0.40 -1.53 8.70 -40.82 -0.36 -1.88 16 36 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 37 H 0.09 -0.12 6.40 -51.93 -0.33 -0.46 16 38 H 0.13 -0.14 8.06 -52.49 -0.42 -0.56 16 39 H 0.13 -0.33 8.06 -52.49 -0.42 -0.76 16 40 H 0.13 -0.35 8.06 -52.48 -0.42 -0.77 16 41 H 0.13 -0.29 6.73 -52.49 -0.35 -0.65 16 42 H 0.10 -0.21 7.64 -51.93 -0.40 -0.60 16 43 H 0.08 -0.17 8.14 -51.92 -0.42 -0.59 16 44 H 0.13 -0.05 8.06 -52.48 -0.42 -0.47 16 45 H 0.13 0.01 4.88 -52.48 -0.26 -0.24 16 LS Contribution 387.21 15.07 5.84 5.84 Total: 0.00 -9.21 387.21 -13.13 -22.33 By element: Atomic # 1 Polarization: -5.77 SS G_CDS: -5.86 Total: -11.63 kcal Atomic # 6 Polarization: 0.17 SS G_CDS: -5.99 Total: -5.82 kcal Atomic # 7 Polarization: 0.89 SS G_CDS: -0.28 Total: 0.61 kcal Atomic # 8 Polarization: -4.58 SS G_CDS: -0.36 Total: -4.94 kcal Atomic # 14 Polarization: 0.13 SS G_CDS: -5.06 Total: -4.94 kcal Atomic # 17 Polarization: -0.04 SS G_CDS: -1.41 Total: -1.45 kcal Total LS contribution 5.84 Total: 5.84 kcal Total: -9.21 -13.13 -22.33 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10565092_12335836.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 26.087 kcal (2) G-P(sol) polarization free energy of solvation -9.207 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 16.880 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.128 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.334 kcal (6) G-S(sol) free energy of system = (1) + (5) 3.753 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.90 seconds