Wall clock time and date at job start Sat Mar 6 2021 13:12:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86297 * 109.47038 * 2 1 4 4 C 1.50695 * 109.47344 * 239.99999 * 2 1 3 5 5 C 1.38235 * 120.00212 * 300.00330 * 4 2 1 6 6 C 1.38231 * 120.00451 * 179.97438 * 5 4 2 7 7 C 1.38234 * 120.00036 * 0.02562 * 6 5 4 8 8 C 1.50703 * 120.00368 * 179.97438 * 7 6 5 9 9 C 1.50702 * 109.46820 * 90.00195 * 8 7 6 10 10 O 1.21284 * 119.99973 * 359.97438 * 9 8 7 11 11 N 1.34774 * 119.99595 * 180.02562 * 9 8 7 12 12 C 1.46503 * 119.99780 * 180.02562 * 11 9 8 13 13 H 1.09001 * 112.85030 * 336.19261 * 12 11 9 14 14 C 1.53959 * 113.61669 * 107.46012 * 12 11 9 15 15 C 1.53784 * 87.01671 * 89.19851 * 14 12 11 16 16 H 1.09000 * 113.61493 * 270.77459 * 15 14 12 17 17 C 1.50695 * 113.61197 * 139.95118 * 15 14 12 18 18 C 1.38337 * 120.00653 * 140.86801 * 17 15 14 19 19 Cl 1.73595 * 120.01149 * 0.29543 * 18 17 15 20 20 C 1.38375 * 119.97350 * 180.02562 * 18 17 15 21 21 C 1.38188 * 119.98842 * 359.97438 * 20 18 17 22 22 C 1.38270 * 120.01173 * 0.02562 * 21 20 18 23 23 C 1.38214 * 120.02795 * 359.97438 * 22 21 20 24 24 C 1.53775 * 113.61697 * 204.99708 * 12 11 9 25 25 C 1.38238 * 119.99698 * 0.25369 * 7 6 5 26 26 C 1.38229 * 119.99999 * 359.49533 * 25 7 6 27 27 H 0.96700 * 113.99795 * 299.99990 * 1 2 3 28 28 H 1.08999 * 109.46896 * 120.00030 * 2 1 3 29 29 H 1.48500 * 110.00237 * 299.99792 * 3 2 1 30 30 H 1.48500 * 110.00320 * 61.32162 * 3 2 1 31 31 H 1.08008 * 119.99552 * 359.97438 * 5 4 2 32 32 H 1.08003 * 119.99834 * 179.97438 * 6 5 4 33 33 H 1.09001 * 109.46515 * 330.00358 * 8 7 6 34 34 H 1.08988 * 109.47144 * 210.00344 * 8 7 6 35 35 H 0.96996 * 120.00310 * 359.97438 * 11 9 8 36 36 H 1.09000 * 113.66538 * 334.67434 * 14 12 11 37 37 H 1.08993 * 113.61397 * 203.71989 * 14 12 11 38 38 H 1.08002 * 120.00559 * 179.97438 * 20 18 17 39 39 H 1.08002 * 119.99517 * 180.02562 * 21 20 18 40 40 H 1.08005 * 119.98265 * 179.97438 * 22 21 20 41 41 H 1.08000 * 119.99115 * 180.02562 * 23 22 21 42 42 H 1.09001 * 113.62119 * 156.24813 * 24 12 11 43 43 H 1.09009 * 113.61136 * 25.34523 * 24 12 11 44 44 H 1.08003 * 119.99691 * 179.71853 * 25 7 6 45 45 H 1.08006 * 120.00402 * 180.25333 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 1.5975 -2.0338 -1.4492 6 6 2.0578 -2.6853 -2.5781 7 6 2.8526 -2.0136 -3.4880 8 6 3.3550 -2.7240 -4.7185 9 6 2.3624 -2.5505 -5.8391 10 8 1.3468 -1.9132 -5.6564 11 7 2.6029 -3.1044 -7.0440 12 6 1.6382 -2.9353 -8.1335 13 1 0.6294 -2.7268 -7.7772 14 6 2.1155 -1.9724 -9.2360 15 6 2.7501 -3.1959 -9.9181 16 1 3.7729 -3.3932 -9.5971 17 6 2.5964 -3.1984 -11.4172 18 6 3.6381 -3.6297 -12.2187 19 17 5.1200 -4.1753 -11.4977 20 6 3.4964 -3.6313 -13.5952 21 6 2.3143 -3.2027 -14.1684 22 6 1.2734 -2.7717 -13.3667 23 6 1.4143 -2.7699 -11.9918 24 6 1.7000 -4.0513 -9.1897 25 6 3.1914 -0.6918 -3.2663 26 6 2.7267 -0.0388 -2.1401 27 1 -0.3933 0.4417 0.7651 28 1 1.7923 -0.5138 0.8900 29 1 1.5615 2.4679 -1.2085 30 1 1.5880 2.4586 1.2242 31 1 0.9768 -2.5588 -0.7381 32 1 1.7972 -3.7194 -2.7488 33 1 3.4760 -3.7852 -4.5013 34 1 4.3152 -2.3020 -5.0150 35 1 3.4149 -3.6144 -7.1900 36 1 2.8436 -1.2384 -8.8907 37 1 1.3021 -1.5264 -9.8082 38 1 4.3095 -3.9675 -14.2215 39 1 2.2034 -3.2042 -15.2427 40 1 0.3499 -2.4364 -13.8152 41 1 0.6008 -2.4335 -11.3662 42 1 0.7728 -4.1747 -9.7494 43 1 2.0932 -4.9932 -8.8072 44 1 3.8161 -0.1683 -3.9749 45 1 2.9880 0.9951 -1.9688 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10565092_12335836.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:12:57 Heat of formation + Delta-G solvation = 7.518213 kcal Electronic energy + Delta-G solvation = -27756.578213 eV Core-core repulsion = 23732.007442 eV Total energy + Delta-G solvation = -4024.570771 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.112 amu Computer time = 1.29 seconds Orbital eigenvalues (eV) -41.66877 -40.83956 -40.04252 -38.81937 -37.76338 -37.41331 -34.63820 -34.07598 -31.94338 -31.82445 -31.67550 -29.74462 -26.73345 -26.48027 -25.47146 -23.80910 -23.75822 -22.75224 -22.20615 -21.32967 -20.14232 -18.60020 -18.53317 -17.91501 -17.61411 -17.00626 -16.92661 -16.63236 -16.40683 -16.15758 -15.96135 -15.33828 -15.17623 -15.12782 -14.79255 -14.75665 -14.64753 -14.38610 -14.36122 -13.98954 -13.59050 -13.41130 -13.39491 -13.19455 -12.97266 -12.86098 -12.68960 -12.47565 -12.26970 -12.16128 -11.91843 -11.76200 -11.75126 -11.52205 -11.26272 -11.00495 -10.53875 -10.09012 -9.86855 -9.83977 -9.59070 -9.58284 -4.97051 0.17319 0.23735 0.27827 0.46118 1.16357 1.27362 1.56500 1.62079 1.92695 2.12431 2.62089 2.74750 3.39123 3.41990 3.59449 3.64690 3.66659 3.84959 3.86041 3.90633 3.95057 4.03898 4.06250 4.10027 4.16650 4.32002 4.38613 4.39474 4.45529 4.49501 4.62688 4.63984 4.71447 4.72916 4.74341 4.83736 4.91520 4.97436 5.00126 5.02784 5.09359 5.14689 5.29051 5.38163 5.43170 5.48665 5.54739 5.59142 5.62372 5.85672 6.01979 6.54418 6.56254 7.26706 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.561 6.561 2 C -0.088 4.088 3 Si 0.767 3.233 4 C -0.092 4.092 5 C -0.109 4.109 6 C -0.116 4.116 7 C -0.072 4.072 8 C -0.097 4.097 9 C 0.515 3.485 10 O -0.579 6.579 11 N -0.703 5.703 12 C 0.118 3.882 13 H 0.084 0.916 14 C -0.139 4.139 15 C -0.074 4.074 16 H 0.107 0.893 17 C -0.070 4.070 18 C -0.049 4.049 19 Cl -0.073 7.073 20 C -0.121 4.121 21 C -0.117 4.117 22 C -0.117 4.117 23 C -0.113 4.113 24 C -0.123 4.123 25 C -0.110 4.110 26 C -0.126 4.126 27 H 0.394 0.606 28 H 0.096 0.904 29 H -0.306 1.306 30 H -0.283 1.283 31 H 0.124 0.876 32 H 0.134 0.866 33 H 0.132 0.868 34 H 0.134 0.866 35 H 0.417 0.583 36 H 0.067 0.933 37 H 0.098 0.902 38 H 0.140 0.860 39 H 0.149 0.851 40 H 0.147 0.853 41 H 0.145 0.855 42 H 0.102 0.898 43 H 0.086 0.914 44 H 0.143 0.857 45 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.613 -2.560 -1.416 5.463 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.370 6.370 2 C -0.196 4.196 3 Si 0.672 3.328 4 C -0.092 4.092 5 C -0.127 4.127 6 C -0.134 4.134 7 C -0.073 4.073 8 C -0.136 4.136 9 C 0.303 3.697 10 O -0.458 6.458 11 N -0.355 5.355 12 C 0.012 3.988 13 H 0.102 0.898 14 C -0.178 4.178 15 C -0.092 4.092 16 H 0.125 0.875 17 C -0.071 4.071 18 C -0.076 4.076 19 Cl -0.044 7.044 20 C -0.140 4.140 21 C -0.135 4.135 22 C -0.135 4.135 23 C -0.131 4.131 24 C -0.161 4.161 25 C -0.128 4.128 26 C -0.143 4.143 27 H 0.244 0.756 28 H 0.114 0.886 29 H -0.234 1.234 30 H -0.210 1.210 31 H 0.142 0.858 32 H 0.152 0.848 33 H 0.150 0.850 34 H 0.152 0.848 35 H 0.254 0.746 36 H 0.086 0.914 37 H 0.116 0.884 38 H 0.157 0.843 39 H 0.167 0.833 40 H 0.165 0.835 41 H 0.162 0.838 42 H 0.120 0.880 43 H 0.105 0.895 44 H 0.161 0.839 45 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges 3.921 -1.660 -1.752 4.604 hybrid contribution -0.891 -0.286 0.362 1.003 sum 3.030 -1.945 -1.391 3.860 Atomic orbital electron populations 1.86564 1.18809 1.80657 1.51016 1.25061 0.83864 1.11962 0.98722 0.94213 0.90297 0.72124 0.76127 1.19503 0.98724 0.94673 0.96287 1.21099 0.99020 0.94408 0.98139 1.21249 0.97205 1.00799 0.94114 1.19579 0.97828 0.94453 0.95421 1.20766 0.98884 1.04552 0.89430 1.21072 0.86998 0.77734 0.83880 1.90755 1.30025 1.41939 1.83125 1.45605 1.24713 1.54990 1.10173 1.21804 0.93448 0.97257 0.86310 0.89779 1.23566 1.01093 0.96355 0.96771 1.21676 1.00652 0.97726 0.89148 0.87510 1.19722 0.92928 0.98803 0.95655 1.21034 0.88668 1.04197 0.93695 1.98359 1.33928 1.88393 1.83744 1.21305 0.99493 1.00418 0.92757 1.21442 0.92443 0.98147 1.01503 1.21589 0.99911 0.98306 0.93662 1.21238 0.96953 0.99350 0.95534 1.23357 0.99762 0.97441 0.95513 1.21213 1.00238 0.94165 0.97169 1.21117 0.98774 0.99851 0.94577 0.75576 0.88571 1.23415 1.21005 0.85778 0.84786 0.85010 0.84776 0.74611 0.91373 0.88396 0.84259 0.83329 0.83490 0.83752 0.87961 0.89525 0.83946 0.84435 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -3.46 12.74 -148.98 -1.90 -5.36 16 2 C -0.09 -0.25 2.81 71.23 0.20 -0.05 16 3 Si 0.77 0.67 29.79 68.60 2.04 2.71 16 4 C -0.09 -0.58 5.42 -19.87 -0.11 -0.69 16 5 C -0.11 -0.73 9.61 22.27 0.21 -0.52 16 6 C -0.12 -0.54 9.70 22.27 0.22 -0.33 16 7 C -0.07 -0.21 4.37 -19.86 -0.09 -0.30 16 8 C -0.10 0.38 5.83 29.10 0.17 0.55 16 9 C 0.52 1.27 7.82 87.66 0.69 1.96 16 10 O -0.58 -7.79 15.63 -3.04 -0.05 -7.84 16 11 N -0.70 2.01 5.26 -439.75 -2.32 -0.30 16 12 C 0.12 -0.11 4.33 45.58 0.20 0.08 16 13 H 0.08 0.33 7.46 -2.39 -0.02 0.31 16 14 C -0.14 0.22 7.27 31.18 0.23 0.45 16 15 C -0.07 0.20 3.65 -11.01 -0.04 0.16 16 16 H 0.11 -0.33 6.55 -2.39 -0.02 -0.34 16 17 C -0.07 0.02 5.29 -19.84 -0.11 -0.09 16 18 C -0.05 -0.07 6.31 22.33 0.14 0.07 16 19 Cl -0.07 -0.09 27.15 -2.72 -0.07 -0.16 16 20 C -0.12 -0.03 9.83 22.29 0.22 0.19 16 21 C -0.12 0.22 10.05 22.27 0.22 0.44 16 22 C -0.12 0.29 10.05 22.27 0.22 0.51 16 23 C -0.11 0.20 8.54 22.26 0.19 0.39 16 24 C -0.12 0.50 7.29 31.12 0.23 0.73 16 25 C -0.11 -0.38 9.70 22.27 0.22 -0.16 16 26 C -0.13 -0.59 8.67 22.27 0.19 -0.40 16 27 H 0.39 -0.98 8.74 -74.06 -0.65 -1.63 16 28 H 0.10 -0.16 7.96 -2.39 -0.02 -0.18 16 29 H -0.31 -2.84 7.11 99.48 0.71 -2.13 16 30 H -0.28 -1.17 7.11 99.48 0.71 -0.47 16 31 H 0.12 0.67 8.06 -2.91 -0.02 0.65 16 32 H 0.13 0.14 8.06 -2.91 -0.02 0.12 16 33 H 0.13 -1.21 8.09 -2.39 -0.02 -1.22 16 34 H 0.13 -1.28 8.08 -2.39 -0.02 -1.30 16 35 H 0.42 -3.70 8.70 -92.71 -0.81 -4.51 16 36 H 0.07 0.01 8.14 -2.39 -0.02 0.00 16 37 H 0.10 -0.22 6.40 -2.39 -0.02 -0.24 16 38 H 0.14 -0.27 8.06 -2.91 -0.02 -0.30 16 39 H 0.15 -0.89 8.06 -2.91 -0.02 -0.91 16 40 H 0.15 -0.96 8.06 -2.91 -0.02 -0.98 16 41 H 0.14 -0.71 6.73 -2.91 -0.02 -0.73 16 42 H 0.10 -0.47 7.64 -2.39 -0.02 -0.49 16 43 H 0.09 -0.47 8.14 -2.38 -0.02 -0.49 16 44 H 0.14 -0.17 8.06 -2.91 -0.02 -0.19 16 45 H 0.14 0.13 4.88 -2.91 -0.01 0.11 16 Total: 0.00 -23.39 387.21 0.53 -22.86 By element: Atomic # 1 Polarization: -14.54 SS G_CDS: -0.38 Total: -14.92 kcal Atomic # 6 Polarization: -0.19 SS G_CDS: 3.20 Total: 3.01 kcal Atomic # 7 Polarization: 2.01 SS G_CDS: -2.32 Total: -0.30 kcal Atomic # 8 Polarization: -11.25 SS G_CDS: -1.95 Total: -13.20 kcal Atomic # 14 Polarization: 0.67 SS G_CDS: 2.04 Total: 2.71 kcal Atomic # 17 Polarization: -0.09 SS G_CDS: -0.07 Total: -0.16 kcal Total: -23.39 0.53 -22.86 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10565092_12335836.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 30.378 kcal (2) G-P(sol) polarization free energy of solvation -23.393 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 6.985 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.534 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.860 kcal (6) G-S(sol) free energy of system = (1) + (5) 7.518 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.29 seconds