Wall clock time and date at job start Sat Mar 6 2021 13:13:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86294 * 109.47341 * 2 1 4 4 C 1.50705 * 109.46912 * 119.99887 * 2 1 3 5 5 C 1.34452 * 126.48562 * 255.02255 * 4 2 1 6 6 N 1.36558 * 109.98699 * 179.97438 * 5 4 2 7 7 C 1.37825 * 109.86267 * 359.97438 * 6 5 4 8 8 C 1.38651 * 133.38471 * 180.35415 * 7 6 5 9 9 C 1.39315 * 119.66581 * 180.17624 * 8 7 6 10 10 C 1.47582 * 119.82888 * 179.72711 * 9 8 7 11 11 O 1.21592 * 120.00084 * 359.73151 * 10 9 8 12 12 N 1.34777 * 119.99884 * 179.72830 * 10 9 8 13 13 C 1.46498 * 120.00155 * 180.02562 * 12 10 9 14 14 H 1.09005 * 112.84878 * 23.80006 * 13 12 10 15 15 C 1.53775 * 113.61693 * 155.00219 * 13 12 10 16 16 C 1.53776 * 87.08215 * 89.20000 * 15 13 12 17 17 H 1.09004 * 113.61537 * 270.79672 * 16 15 13 18 18 C 1.50707 * 113.61472 * 139.98223 * 16 15 13 19 19 C 1.38325 * 120.00628 * 121.50743 * 18 16 15 20 20 Cl 1.73606 * 120.01335 * 0.02562 * 19 18 16 21 21 C 1.38369 * 119.97454 * 180.02562 * 19 18 16 22 22 C 1.38193 * 119.98692 * 359.97438 * 21 19 18 23 23 C 1.38270 * 120.01077 * 359.72637 * 22 21 19 24 24 C 1.38215 * 120.02537 * 0.55549 * 23 22 21 25 25 C 1.53779 * 87.17561 * 25.39224 * 16 15 13 26 26 C 1.40200 * 120.33840 * 359.45829 * 9 8 7 27 27 C 1.36235 * 120.37583 * 0.24872 * 26 9 8 28 28 C 1.39879 * 119.96017 * 0.02562 * 27 26 9 29 29 H 0.96700 * 114.00006 * 59.99963 * 1 2 3 30 30 H 1.08999 * 109.47454 * 239.99576 * 2 1 3 31 31 H 1.48504 * 109.99916 * 59.99529 * 3 2 1 32 32 H 1.48496 * 110.00416 * 181.31863 * 3 2 1 33 33 H 1.08003 * 125.00487 * 359.96383 * 5 4 2 34 34 H 0.96999 * 125.06782 * 180.02562 * 6 5 4 35 35 H 1.07998 * 120.16124 * 359.90692 * 8 7 6 36 36 H 0.96998 * 119.99712 * 0.02562 * 12 10 9 37 37 H 1.08998 * 113.61427 * 334.64955 * 15 13 12 38 38 H 1.09000 * 113.69279 * 203.76525 * 15 13 12 39 39 H 1.08003 * 120.00885 * 179.97438 * 21 19 18 40 40 H 1.08000 * 119.99879 * 180.02562 * 22 21 19 41 41 H 1.07997 * 119.98420 * 180.29209 * 23 22 21 42 42 H 1.08002 * 119.99636 * 179.72646 * 24 23 22 43 43 H 1.09001 * 113.61610 * 89.15541 * 25 16 15 44 44 H 1.09002 * 113.61480 * 220.06441 * 25 16 15 45 45 H 1.08005 * 119.81016 * 180.27146 * 26 9 8 46 46 H 1.08004 * 120.01461 * 180.02562 * 27 26 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.4612 -0.1363 2.3248 6 7 2.8026 -1.0947 3.2358 7 6 2.4934 -2.3431 2.7403 8 6 2.6236 -3.6275 3.2460 9 6 2.2106 -4.7153 2.4799 10 6 2.3531 -6.0844 3.0122 11 8 2.8344 -6.2610 4.1148 12 7 1.9497 -7.1390 2.2762 13 6 2.0906 -8.4980 2.8048 14 1 2.1307 -8.5265 3.8938 15 6 1.0952 -9.5011 2.1985 16 6 2.1450 -9.7623 1.1057 17 1 2.0551 -9.0981 0.2460 18 6 2.2612 -11.2131 0.7145 19 6 2.0465 -11.5952 -0.5975 20 17 1.6438 -10.4036 -1.7941 21 6 2.1528 -12.9274 -0.9558 22 6 2.4738 -13.8754 -0.0029 23 6 2.6944 -13.4921 1.3072 24 6 2.5827 -12.1622 1.6668 25 6 3.2059 -9.3120 2.1238 26 6 1.6552 -4.5158 1.2082 27 6 1.5182 -3.2568 0.7061 28 6 1.9334 -2.1547 1.4609 29 1 -0.3933 0.4417 -0.7650 30 1 1.7924 -0.5139 -0.8899 31 1 1.5615 2.4679 1.2085 32 1 3.5346 1.7702 -0.0321 33 1 2.5970 0.9262 2.4629 34 1 3.2023 -0.9224 4.1026 35 1 3.0470 -3.7840 4.2271 36 1 1.5661 -6.9980 1.3966 37 1 0.1818 -9.0382 1.8248 38 1 0.9022 -10.3652 2.8342 39 1 1.9848 -13.2264 -1.9799 40 1 2.5572 -14.9153 -0.2824 41 1 2.9499 -14.2326 2.0505 42 1 2.7507 -11.8639 2.6911 43 1 3.5922 -10.1240 2.7399 44 1 3.9941 -8.6967 1.6899 45 1 1.3339 -5.3650 0.6233 46 1 1.0892 -3.1097 -0.2741 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10565092_12335838.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:13:00 Heat of formation + Delta-G solvation = 47.597140 kcal Electronic energy + Delta-G solvation = -30939.534262 eV Core-core repulsion = 26594.823252 eV Total energy + Delta-G solvation = -4344.711010 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 383.108 amu Computer time = 1.34 seconds Orbital eigenvalues (eV) -42.58706 -41.65731 -40.52089 -38.96635 -37.82705 -37.48365 -37.40462 -34.73637 -33.44583 -31.96744 -31.66379 -30.86795 -30.51852 -26.74459 -26.65900 -26.29594 -24.82592 -23.74428 -23.65657 -22.59601 -21.69941 -20.69183 -20.19271 -19.40751 -18.50610 -18.26624 -18.10493 -17.41262 -17.19363 -16.72406 -16.41398 -16.15636 -15.90349 -15.68592 -15.50439 -15.16833 -15.06320 -14.99179 -14.87067 -14.76131 -14.74665 -14.65986 -14.37294 -13.84912 -13.56623 -13.39739 -13.27027 -12.96568 -12.74393 -12.69225 -12.58551 -12.46950 -12.17702 -12.14965 -11.93720 -11.77977 -11.52534 -11.27192 -11.17582 -10.89120 -10.20433 -10.15859 -9.83266 -9.58064 -9.48210 -8.92485 -4.92037 -0.43166 0.18485 0.28614 0.29190 1.17418 1.21417 1.36931 1.70363 1.77664 1.82506 2.00633 2.12964 2.63250 2.78114 3.39242 3.46584 3.55056 3.59330 3.63740 3.67070 3.71673 3.86161 3.94788 4.01211 4.04944 4.10588 4.16836 4.19500 4.28805 4.39106 4.40237 4.40548 4.48597 4.61306 4.71590 4.72294 4.74972 4.82556 4.89250 4.89777 4.97652 5.00855 5.09840 5.13819 5.30197 5.32016 5.36166 5.42930 5.49582 5.49865 5.58204 5.86790 5.87048 6.35099 6.40383 7.02286 7.07484 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.567 6.567 2 C -0.045 4.045 3 Si 0.780 3.220 4 C -0.188 4.188 5 C 0.066 3.934 6 N -0.579 5.579 7 C 0.067 3.933 8 C -0.068 4.068 9 C -0.131 4.131 10 C 0.566 3.434 11 O -0.578 6.578 12 N -0.694 5.694 13 C 0.116 3.884 14 H 0.093 0.907 15 C -0.122 4.122 16 C -0.076 4.076 17 H 0.104 0.896 18 C -0.070 4.070 19 C -0.050 4.050 20 Cl -0.075 7.075 21 C -0.121 4.121 22 C -0.117 4.117 23 C -0.116 4.116 24 C -0.112 4.112 25 C -0.138 4.138 26 C -0.106 4.106 27 C -0.076 4.076 28 C -0.082 4.082 29 H 0.400 0.600 30 H 0.084 0.916 31 H -0.289 1.289 32 H -0.291 1.291 33 H 0.186 0.814 34 H 0.433 0.567 35 H 0.131 0.869 36 H 0.414 0.586 37 H 0.085 0.915 38 H 0.109 0.891 39 H 0.139 0.861 40 H 0.149 0.851 41 H 0.148 0.852 42 H 0.147 0.853 43 H 0.105 0.895 44 H 0.066 0.934 45 H 0.156 0.844 46 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.286 0.648 -4.624 4.843 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.377 6.377 2 C -0.155 4.155 3 Si 0.685 3.315 4 C -0.195 4.195 5 C -0.062 4.062 6 N -0.182 5.182 7 C -0.040 4.040 8 C -0.089 4.089 9 C -0.135 4.135 10 C 0.355 3.645 11 O -0.459 6.459 12 N -0.346 5.346 13 C 0.010 3.990 14 H 0.111 0.889 15 C -0.160 4.160 16 C -0.094 4.094 17 H 0.122 0.878 18 C -0.070 4.070 19 C -0.077 4.077 20 Cl -0.046 7.046 21 C -0.140 4.140 22 C -0.135 4.135 23 C -0.134 4.134 24 C -0.130 4.130 25 C -0.177 4.177 26 C -0.126 4.126 27 C -0.094 4.094 28 C -0.088 4.088 29 H 0.251 0.749 30 H 0.102 0.898 31 H -0.216 1.216 32 H -0.219 1.219 33 H 0.203 0.797 34 H 0.273 0.727 35 H 0.148 0.852 36 H 0.252 0.748 37 H 0.104 0.896 38 H 0.127 0.873 39 H 0.157 0.843 40 H 0.167 0.833 41 H 0.166 0.834 42 H 0.165 0.835 43 H 0.123 0.877 44 H 0.085 0.915 45 H 0.173 0.827 46 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges -0.374 0.930 -2.874 3.044 hybrid contribution 0.245 -0.215 0.248 0.410 sum -0.129 0.715 -2.626 2.725 Atomic orbital electron populations 1.86484 1.17748 1.82381 1.51084 1.24185 0.85317 1.10420 0.95569 0.94012 0.77242 0.74667 0.85574 1.20099 1.10027 0.91530 0.97881 1.22000 1.00140 0.94868 0.89239 1.41717 1.54517 1.03451 1.18519 1.18192 1.03851 0.86676 0.95233 1.20123 1.00111 0.88490 1.00183 1.19485 1.05702 0.91721 0.96629 1.18293 0.76848 0.85216 0.84135 1.90766 1.46430 1.86736 1.21969 1.45471 1.63093 1.04971 1.21048 1.21919 0.97484 0.80498 0.99055 0.88899 1.23375 0.96993 0.98894 0.96722 1.21687 0.97764 0.91949 0.98044 0.87786 1.19695 0.99570 0.96422 0.91355 1.21042 1.05590 0.90721 0.90302 1.98361 1.92333 1.57480 1.56402 1.21297 1.00307 0.90986 1.01393 1.21446 0.98700 1.00394 0.92984 1.21593 0.98274 0.96568 0.96957 1.21252 0.99200 0.92535 0.99964 1.23587 0.96566 0.99941 0.97583 1.20942 0.99452 0.98155 0.94040 1.20448 0.98451 0.90215 1.00323 1.19547 1.01325 0.93836 0.94049 0.74925 0.89781 1.21632 1.21855 0.79731 0.72673 0.85156 0.74807 0.89622 0.87302 0.84316 0.83328 0.83387 0.83489 0.87700 0.91546 0.82689 0.83368 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.57 0.05 12.86 -148.98 -1.92 -1.87 16 2 C -0.05 0.03 3.05 71.24 0.22 0.25 16 3 Si 0.78 -2.99 30.79 68.60 2.11 -0.87 16 4 C -0.19 -0.97 5.60 -18.64 -0.10 -1.08 16 5 C 0.07 0.21 10.43 83.09 0.87 1.08 16 6 N -0.58 -1.66 6.07 -187.72 -1.14 -2.80 16 7 C 0.07 0.48 7.26 38.96 0.28 0.76 16 8 C -0.07 -0.53 9.61 22.63 0.22 -0.32 16 9 C -0.13 -0.83 5.87 -20.08 -0.12 -0.94 16 10 C 0.57 4.49 7.76 86.71 0.67 5.16 16 11 O -0.58 -9.03 15.91 -4.00 -0.06 -9.09 16 12 N -0.69 -0.81 5.21 -442.86 -2.31 -3.12 16 13 C 0.12 0.04 4.33 45.58 0.20 0.24 16 14 H 0.09 0.36 7.46 -2.38 -0.02 0.34 16 15 C -0.12 0.41 7.29 31.12 0.23 0.63 16 16 C -0.08 0.14 3.65 -11.01 -0.04 0.10 16 17 H 0.10 -0.16 6.55 -2.38 -0.02 -0.18 16 18 C -0.07 -0.01 5.29 -19.84 -0.11 -0.11 16 19 C -0.05 -0.10 6.31 22.32 0.14 0.04 16 20 Cl -0.07 -0.15 27.15 -2.72 -0.07 -0.23 16 21 C -0.12 -0.07 9.83 22.29 0.22 0.15 16 22 C -0.12 0.21 10.05 22.27 0.22 0.43 16 23 C -0.12 0.30 10.05 22.27 0.22 0.52 16 24 C -0.11 0.22 8.54 22.26 0.19 0.41 16 25 C -0.14 0.11 7.27 31.18 0.23 0.34 16 26 C -0.11 -0.18 9.46 22.28 0.21 0.03 16 27 C -0.08 -0.25 10.03 22.20 0.22 -0.03 16 28 C -0.08 -0.58 6.35 -20.14 -0.13 -0.71 16 29 H 0.40 -4.32 8.74 -74.06 -0.65 -4.97 16 30 H 0.08 -0.32 7.96 -2.39 -0.02 -0.34 16 31 H -0.29 -0.57 7.04 99.48 0.70 0.13 16 32 H -0.29 -0.58 7.11 99.48 0.71 0.13 16 33 H 0.19 -0.21 6.30 -2.91 -0.02 -0.22 16 34 H 0.43 -1.29 8.96 -92.71 -0.83 -2.12 16 35 H 0.13 1.06 7.62 -2.91 -0.02 1.04 16 36 H 0.41 -1.64 6.69 -92.71 -0.62 -2.26 16 37 H 0.09 -0.36 8.14 -2.39 -0.02 -0.38 16 38 H 0.11 -0.52 7.65 -2.39 -0.02 -0.54 16 39 H 0.14 -0.22 8.06 -2.91 -0.02 -0.24 16 40 H 0.15 -0.88 8.06 -2.91 -0.02 -0.90 16 41 H 0.15 -1.01 8.06 -2.91 -0.02 -1.03 16 42 H 0.15 -0.81 6.73 -2.91 -0.02 -0.83 16 43 H 0.10 -0.28 6.39 -2.39 -0.02 -0.29 16 44 H 0.07 0.11 8.14 -2.39 -0.02 0.09 16 45 H 0.16 -0.81 6.36 -2.91 -0.02 -0.83 16 46 H 0.15 -0.13 8.06 -2.91 -0.02 -0.15 16 Total: 0.00 -24.04 396.10 -0.53 -24.57 By element: Atomic # 1 Polarization: -12.56 SS G_CDS: -0.99 Total: -13.55 kcal Atomic # 6 Polarization: 3.12 SS G_CDS: 3.84 Total: 6.96 kcal Atomic # 7 Polarization: -2.47 SS G_CDS: -3.45 Total: -5.91 kcal Atomic # 8 Polarization: -8.98 SS G_CDS: -1.98 Total: -10.96 kcal Atomic # 14 Polarization: -2.99 SS G_CDS: 2.11 Total: -0.87 kcal Atomic # 17 Polarization: -0.15 SS G_CDS: -0.07 Total: -0.23 kcal Total: -24.04 -0.53 -24.57 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10565092_12335838.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 72.167 kcal (2) G-P(sol) polarization free energy of solvation -24.036 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 48.130 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.533 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.569 kcal (6) G-S(sol) free energy of system = (1) + (5) 47.597 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.34 seconds