Wall clock time and date at job start Sat Mar 6 2021 13:13:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86296 * 109.47298 * 2 1 4 4 C 1.50704 * 109.47150 * 119.99986 * 2 1 3 5 5 C 1.37938 * 119.92308 * 64.99633 * 4 2 1 6 6 C 1.39589 * 119.87748 * 179.97438 * 5 4 2 7 7 C 1.47852 * 120.14442 * 180.02562 * 6 5 4 8 8 O 1.21551 * 119.99689 * 359.97438 * 7 6 5 9 9 N 1.34772 * 120.00210 * 179.97438 * 7 6 5 10 10 C 1.46500 * 120.00013 * 180.02562 * 9 7 6 11 11 H 1.09001 * 112.85018 * 25.32651 * 10 9 7 12 12 C 1.53781 * 113.61612 * 156.52839 * 10 9 7 13 13 C 1.53772 * 87.08404 * 89.11583 * 12 10 9 14 14 H 1.09002 * 113.61203 * 270.80211 * 13 12 10 15 15 C 1.50702 * 113.61852 * 139.98118 * 13 12 10 16 16 C 1.38331 * 120.00610 * 119.72588 * 15 13 12 17 17 Cl 1.73607 * 120.01412 * 359.97271 * 16 15 13 18 18 C 1.38376 * 119.97230 * 179.70589 * 16 15 13 19 19 C 1.38189 * 119.98547 * 0.59144 * 18 16 15 20 20 C 1.38264 * 120.01070 * 359.70282 * 19 18 16 21 21 C 1.38218 * 120.02847 * 359.97438 * 20 19 18 22 22 C 1.53782 * 113.61353 * 254.13155 * 10 9 7 23 23 C 1.39549 * 119.72041 * 0.02562 * 6 5 4 24 24 C 1.38068 * 119.83925 * 0.25251 * 23 6 5 25 25 Br 1.89106 * 119.93714 * 179.74777 * 24 23 6 26 26 C 1.38366 * 119.91968 * 244.98408 * 4 2 1 27 27 H 0.96693 * 113.99930 * 300.00397 * 1 2 3 28 28 H 1.09003 * 109.47586 * 239.99782 * 2 1 3 29 29 H 1.48502 * 110.00220 * 178.67665 * 3 2 1 30 30 H 1.48499 * 109.99958 * 300.00067 * 3 2 1 31 31 H 1.08004 * 120.06126 * 359.96685 * 5 4 2 32 32 H 0.96998 * 120.00472 * 359.97438 * 9 7 6 33 33 H 1.09003 * 113.61427 * 203.66638 * 12 10 9 34 34 H 1.09002 * 113.61367 * 334.56361 * 12 10 9 35 35 H 1.08000 * 120.00328 * 180.27506 * 18 16 15 36 36 H 1.07996 * 119.99609 * 179.73094 * 19 18 16 37 37 H 1.08003 * 119.98429 * 180.02562 * 20 19 18 38 38 H 1.08004 * 119.99212 * 180.02562 * 21 20 19 39 39 H 1.09005 * 113.61448 * 25.43398 * 22 10 9 40 40 H 1.09003 * 113.61433 * 156.32802 * 22 10 9 41 41 H 1.08002 * 120.07736 * 179.97438 * 23 6 5 42 42 H 1.07997 * 119.86287 * 359.97438 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.6843 -2.0573 1.3965 6 6 2.1505 -2.7145 2.5363 7 6 1.8896 -4.1582 2.7199 8 8 1.2674 -4.7753 1.8775 9 7 2.3415 -4.7899 3.8213 10 6 2.0834 -6.2205 4.0030 11 1 1.9320 -6.7464 3.0602 12 6 3.0862 -6.9133 4.9407 13 6 2.1421 -6.5419 6.0963 14 1 2.3511 -5.5659 6.5344 15 6 1.9969 -7.6286 7.1303 16 6 2.3607 -7.3874 8.4430 17 17 2.9852 -5.8333 8.8996 18 6 2.2213 -8.3838 9.3931 19 6 1.7304 -9.6228 9.0277 20 6 1.3728 -9.8650 7.7143 21 6 1.5055 -8.8681 6.7662 22 6 1.0052 -6.5230 5.0570 23 6 2.8640 -2.0031 3.5019 24 6 3.0997 -0.6541 3.3267 25 35 4.0600 0.3141 4.6368 26 6 2.6395 -0.0101 2.1910 27 1 -0.3933 0.4417 0.7650 28 1 1.7924 -0.5139 -0.8900 29 1 3.5346 1.7702 0.0322 30 1 1.5615 2.4678 -1.2085 31 1 1.1311 -2.6024 0.6459 32 1 2.8382 -4.2977 4.4934 33 1 3.1703 -7.9871 4.7735 34 1 4.0541 -6.4145 4.9901 35 1 2.5010 -8.1947 10.4190 36 1 1.6257 -10.4019 9.7682 37 1 0.9888 -10.8334 7.4293 38 1 1.2255 -9.0578 5.7404 39 1 0.2941 -5.7093 5.2002 40 1 0.5213 -7.4903 4.9215 41 1 3.2270 -2.5058 4.3862 42 1 2.8308 1.0442 2.0559 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10565092_12335870.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:13:26 Heat of formation + Delta-G solvation = 12.885796 kcal Electronic energy + Delta-G solvation = -28279.318015 eV Core-core repulsion = 24070.699616 eV Total energy + Delta-G solvation = -4208.618399 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 422.007 amu Computer time = 0.93 seconds Orbital eigenvalues (eV) -41.91583 -41.12154 -40.02319 -38.81889 -37.72229 -37.43748 -34.88341 -33.67055 -33.09427 -31.76865 -31.68935 -30.52517 -27.14942 -26.87344 -26.68463 -25.18348 -23.76964 -22.89129 -22.67870 -21.67096 -20.31011 -19.23115 -18.41741 -17.88712 -17.67725 -17.30057 -16.92133 -16.53766 -16.43969 -16.37860 -16.03764 -15.67058 -15.29296 -15.24747 -14.98969 -14.87317 -14.84916 -14.45738 -14.34051 -14.18164 -13.64273 -13.46766 -13.36289 -13.08554 -13.03648 -12.77406 -12.52537 -12.26283 -12.23498 -12.00972 -11.98524 -11.86893 -11.59840 -11.50938 -11.36704 -11.12113 -10.61844 -10.37250 -10.16805 -9.97339 -9.91991 -9.65760 -5.16079 -0.55514 -0.22362 0.10126 0.19568 0.35961 1.12422 1.13622 1.49885 1.55237 1.83981 1.91397 2.44818 2.53487 3.17618 3.25271 3.29283 3.40584 3.47927 3.55397 3.70565 3.72913 3.79507 3.82880 3.91101 3.95376 4.02469 4.15366 4.19769 4.26191 4.28640 4.42395 4.52129 4.57724 4.62040 4.67529 4.70601 4.78060 4.85814 4.87959 4.89450 4.97847 5.04058 5.19435 5.29153 5.34541 5.38714 5.48419 5.74101 6.29512 6.44070 7.03701 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.534 6.534 2 C -0.067 4.067 3 Si 0.681 3.319 4 C -0.119 4.119 5 C -0.017 4.017 6 C -0.128 4.128 7 C 0.565 3.435 8 O -0.524 6.524 9 N -0.708 5.708 10 C 0.121 3.879 11 H 0.109 0.891 12 C -0.133 4.133 13 C -0.082 4.082 14 H 0.105 0.895 15 C -0.062 4.062 16 C -0.033 4.033 17 Cl -0.068 7.068 18 C -0.108 4.108 19 C -0.111 4.111 20 C -0.111 4.111 21 C -0.106 4.106 22 C -0.142 4.142 23 C -0.054 4.054 24 C -0.094 4.094 25 Br -0.032 7.032 26 C -0.062 4.062 27 H 0.381 0.619 28 H 0.121 0.879 29 H -0.253 1.253 30 H -0.248 1.248 31 H 0.148 0.852 32 H 0.401 0.599 33 H 0.101 0.899 34 H 0.079 0.921 35 H 0.133 0.867 36 H 0.132 0.868 37 H 0.130 0.870 38 H 0.133 0.867 39 H 0.077 0.923 40 H 0.098 0.902 41 H 0.138 0.862 42 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.482 -0.120 3.449 3.485 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.340 6.340 2 C -0.178 4.178 3 Si 0.582 3.418 4 C -0.121 4.121 5 C -0.036 4.036 6 C -0.132 4.132 7 C 0.352 3.648 8 O -0.400 6.400 9 N -0.360 5.360 10 C 0.015 3.985 11 H 0.127 0.873 12 C -0.171 4.171 13 C -0.100 4.100 14 H 0.123 0.877 15 C -0.063 4.063 16 C -0.060 4.060 17 Cl -0.039 7.039 18 C -0.127 4.127 19 C -0.129 4.129 20 C -0.129 4.129 21 C -0.124 4.124 22 C -0.180 4.180 23 C -0.074 4.074 24 C -0.174 4.174 25 Br 0.054 6.946 26 C -0.082 4.082 27 H 0.228 0.772 28 H 0.138 0.862 29 H -0.177 1.177 30 H -0.172 1.172 31 H 0.166 0.834 32 H 0.237 0.763 33 H 0.119 0.881 34 H 0.098 0.902 35 H 0.151 0.849 36 H 0.150 0.850 37 H 0.148 0.852 38 H 0.151 0.849 39 H 0.096 0.904 40 H 0.116 0.884 41 H 0.156 0.844 42 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges 1.032 0.220 2.391 2.614 hybrid contribution 0.270 -0.491 0.239 0.609 sum 1.302 -0.271 2.631 2.947 Atomic orbital electron populations 1.86552 1.16532 1.81634 1.49258 1.25083 0.85659 1.10155 0.96871 0.94876 0.81385 0.77618 0.87893 1.20380 0.99792 0.94595 0.97299 1.21299 0.93577 0.93119 0.95587 1.19942 1.02705 0.93701 0.96808 1.18085 0.78898 0.86343 0.81488 1.90827 1.39593 1.67032 1.42551 1.45580 1.57573 1.09974 1.22863 1.21869 0.96309 0.80833 0.99443 0.87313 1.23412 0.97847 1.02024 0.93824 1.21790 0.97895 0.97660 0.92639 0.87674 1.19538 0.98831 0.95555 0.92340 1.20865 1.02921 0.87921 0.94281 1.98372 1.85601 1.27596 1.92325 1.21108 0.99732 0.92511 0.99350 1.21176 0.98540 0.96469 0.96730 1.21297 0.98974 0.99511 0.93153 1.21013 0.99231 0.91961 1.00216 1.23615 0.96535 1.03384 0.94485 1.21287 0.95459 0.92356 0.98305 1.21651 1.04089 0.95068 0.96569 1.96853 1.72730 1.73454 1.51573 1.21204 0.95308 0.99865 0.91792 0.77192 0.86205 1.17725 1.17237 0.83384 0.76317 0.88067 0.90236 0.84865 0.84988 0.85203 0.84914 0.90411 0.88411 0.84413 0.84069 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.21 12.83 -35.23 -0.45 -0.24 16 2 C -0.07 0.07 2.80 36.01 0.10 0.17 16 3 Si 0.68 -1.20 29.79 -169.99 -5.06 -6.26 16 4 C -0.12 0.08 5.35 -104.68 -0.56 -0.48 16 5 C -0.02 -0.01 9.22 -39.19 -0.36 -0.37 16 6 C -0.13 -0.05 5.87 -104.97 -0.62 -0.66 16 7 C 0.56 0.94 7.77 -12.33 -0.10 0.84 16 8 O -0.52 -2.79 15.97 5.32 0.08 -2.70 16 9 N -0.71 0.69 5.21 -53.96 -0.28 0.40 16 10 C 0.12 -0.13 4.30 -67.12 -0.29 -0.42 16 11 H 0.11 0.03 7.50 -51.93 -0.39 -0.36 16 12 C -0.13 0.30 7.29 -25.92 -0.19 0.11 16 13 C -0.08 0.12 3.65 -90.82 -0.33 -0.21 16 14 H 0.11 -0.15 6.58 -51.93 -0.34 -0.49 16 15 C -0.06 0.02 5.29 -104.59 -0.55 -0.53 16 16 C -0.03 -0.02 6.32 -39.50 -0.25 -0.27 16 17 Cl -0.07 -0.04 27.16 -51.86 -1.41 -1.44 16 18 C -0.11 0.00 9.83 -39.55 -0.39 -0.38 16 19 C -0.11 0.10 10.05 -39.59 -0.40 -0.30 16 20 C -0.11 0.13 10.05 -39.58 -0.40 -0.27 16 21 C -0.11 0.12 8.61 -39.59 -0.34 -0.23 16 22 C -0.14 0.19 7.27 -25.78 -0.19 0.01 16 23 C -0.05 0.06 9.28 -39.16 -0.36 -0.30 16 24 C -0.09 0.08 6.22 -39.57 -0.25 -0.17 16 25 Br -0.03 0.02 33.69 -68.01 -2.29 -2.27 16 26 C -0.06 0.08 8.40 -39.46 -0.33 -0.25 16 27 H 0.38 -1.65 8.70 45.56 0.40 -1.25 16 28 H 0.12 -0.08 7.96 -51.93 -0.41 -0.50 16 29 H -0.25 -0.12 7.11 56.52 0.40 0.28 16 30 H -0.25 -0.37 7.11 56.52 0.40 0.03 16 31 H 0.15 0.24 7.65 -52.48 -0.40 -0.16 16 32 H 0.40 -1.24 6.74 -40.82 -0.28 -1.52 16 33 H 0.10 -0.27 7.72 -51.93 -0.40 -0.67 16 34 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 35 H 0.13 -0.16 8.06 -52.49 -0.42 -0.58 16 36 H 0.13 -0.36 8.06 -52.49 -0.42 -0.78 16 37 H 0.13 -0.39 8.06 -52.48 -0.42 -0.81 16 38 H 0.13 -0.37 6.66 -52.48 -0.35 -0.72 16 39 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 40 H 0.10 -0.20 6.32 -51.93 -0.33 -0.53 16 41 H 0.14 -0.46 6.40 -52.49 -0.34 -0.79 16 42 H 0.14 -0.40 4.89 -52.49 -0.26 -0.65 16 LS Contribution 384.01 15.07 5.79 5.79 Total: 0.00 -7.18 384.01 -13.83 -21.01 By element: Atomic # 1 Polarization: -6.17 SS G_CDS: -4.41 Total: -10.58 kcal Atomic # 6 Polarization: 2.09 SS G_CDS: -5.80 Total: -3.71 kcal Atomic # 7 Polarization: 0.69 SS G_CDS: -0.28 Total: 0.40 kcal Atomic # 8 Polarization: -2.57 SS G_CDS: -0.37 Total: -2.94 kcal Atomic # 14 Polarization: -1.20 SS G_CDS: -5.06 Total: -6.26 kcal Atomic # 17 Polarization: -0.04 SS G_CDS: -1.41 Total: -1.44 kcal Atomic # 35 Polarization: 0.02 SS G_CDS: -2.29 Total: -2.27 kcal Total LS contribution 5.79 Total: 5.79 kcal Total: -7.18 -13.83 -21.01 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10565092_12335870.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 33.894 kcal (2) G-P(sol) polarization free energy of solvation -7.177 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 26.717 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.831 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.008 kcal (6) G-S(sol) free energy of system = (1) + (5) 12.886 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.93 seconds