Wall clock time and date at job start Sat Mar 6 2021 13:13:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86307 * 109.46976 * 2 1 4 4 C 1.50697 * 109.47331 * 119.99450 * 2 1 3 5 5 C 1.38402 * 119.82289 * 65.00158 * 4 2 1 6 6 C 1.37895 * 120.17010 * 180.02562 * 5 4 2 7 7 C 1.39831 * 119.82533 * 359.97438 * 6 5 4 8 8 C 1.47206 * 120.17048 * 179.97438 * 7 6 5 9 9 C 1.34809 * 120.00112 * 180.02562 * 8 7 6 10 10 C 1.46426 * 119.99884 * 179.97438 * 9 8 7 11 11 O 1.21695 * 120.00474 * 359.97438 * 10 9 8 12 12 N 1.34778 * 120.00168 * 179.97438 * 10 9 8 13 13 C 1.46496 * 120.00189 * 179.97438 * 12 10 9 14 14 H 1.08998 * 112.85096 * 336.19392 * 13 12 10 15 15 C 1.53782 * 113.61676 * 107.50654 * 13 12 10 16 16 C 1.53777 * 87.08297 * 89.11208 * 15 13 12 17 17 H 1.08997 * 113.69321 * 270.87523 * 16 15 13 18 18 C 1.50704 * 113.61520 * 139.98009 * 16 15 13 19 19 C 1.38331 * 120.00793 * 142.22965 * 18 16 15 20 20 Cl 1.73605 * 120.01087 * 359.97438 * 19 18 16 21 21 C 1.38368 * 119.97304 * 179.70616 * 19 18 16 22 22 C 1.38199 * 119.98758 * 0.54908 * 21 19 18 23 23 C 1.38262 * 120.00916 * 359.75070 * 22 21 19 24 24 C 1.38215 * 120.02928 * 359.97232 * 23 22 21 25 25 C 1.53781 * 113.61314 * 205.00119 * 13 12 10 26 26 C 1.39837 * 119.66296 * 359.95443 * 7 6 5 27 27 C 1.37893 * 119.82221 * 0.08637 * 26 7 6 28 28 H 0.96695 * 114.00141 * 300.00361 * 1 2 3 29 29 H 1.08999 * 109.47455 * 240.00024 * 2 1 3 30 30 H 1.48503 * 109.99913 * 299.99859 * 3 2 1 31 31 H 1.48501 * 110.00205 * 61.31746 * 3 2 1 32 32 H 1.08002 * 119.91545 * 0.02562 * 5 4 2 33 33 H 1.08008 * 120.08686 * 179.70115 * 6 5 4 34 34 H 1.08000 * 120.00123 * 359.97438 * 8 7 6 35 35 H 1.07995 * 120.00226 * 359.97438 * 9 8 7 36 36 H 0.97005 * 119.99803 * 0.02562 * 12 10 9 37 37 H 1.09000 * 113.61634 * 203.66445 * 15 13 12 38 38 H 1.09001 * 113.61027 * 334.56721 * 15 13 12 39 39 H 1.08004 * 120.00898 * 180.27375 * 21 19 18 40 40 H 1.07994 * 119.99397 * 179.76700 * 22 21 19 41 41 H 1.08004 * 119.98390 * 179.97438 * 23 22 21 42 42 H 1.08006 * 119.99214 * 180.02562 * 24 23 22 43 43 H 1.09001 * 113.61871 * 25.42993 * 25 13 12 44 44 H 1.09006 * 113.61559 * 156.33316 * 25 13 12 45 45 H 1.07999 * 120.08960 * 180.02562 * 26 7 6 46 46 H 1.08008 * 119.91091 * 179.97438 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7103 1.2305 5 6 1.6824 -2.0617 1.3950 6 6 2.1383 -2.7187 2.5184 7 6 2.8543 -2.0159 3.4925 8 6 3.3440 -2.7095 4.6950 9 6 4.0334 -2.0285 5.6322 10 6 4.5201 -2.7184 6.8285 11 8 4.3018 -3.9064 6.9771 12 7 5.2098 -2.0377 7.7653 13 6 5.6962 -2.7278 8.9625 14 1 5.1233 -3.6253 9.1959 15 6 7.2183 -2.9464 8.9720 16 6 7.3324 -1.5722 9.6527 17 1 7.4181 -0.7420 8.9517 18 6 8.3684 -1.5242 10.7460 19 6 9.1440 -0.3913 10.9150 20 17 8.9246 0.9754 9.8672 21 6 10.0908 -0.3458 11.9230 22 6 10.2690 -1.4362 12.7531 23 6 9.4978 -2.5706 12.5797 24 6 8.5479 -2.6146 11.5767 25 6 5.9015 -1.7970 10.1693 26 6 3.1030 -0.6509 3.3183 27 6 2.6398 -0.0080 2.1898 28 1 -0.3933 0.4417 0.7650 29 1 1.7924 -0.5138 -0.8900 30 1 1.5614 2.4679 -1.2085 31 1 1.5878 2.4587 1.2242 32 1 1.1297 -2.6032 0.6415 33 1 1.9391 -3.7723 2.6477 34 1 3.1503 -3.7638 4.8268 35 1 4.2268 -0.9742 5.5006 36 1 5.3835 -1.0907 7.6471 37 1 7.5366 -3.7749 9.6047 38 1 7.6610 -2.9786 7.9764 39 1 10.6936 0.5402 12.0583 40 1 11.0105 -1.4022 13.5375 41 1 9.6377 -3.4227 13.2284 42 1 7.9455 -3.5009 11.4420 43 1 5.2812 -0.9013 10.1405 44 1 5.8597 -2.3113 11.1295 45 1 3.6556 -0.1015 4.0661 46 1 2.8307 1.0464 2.0540 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10565092_12360594.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:13:32 Heat of formation + Delta-G solvation = 28.016642 kcal Electronic energy + Delta-G solvation = -28453.787125 eV Core-core repulsion = 24301.879092 eV Total energy + Delta-G solvation = -4151.908033 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 370.112 amu Computer time = 1.08 seconds Orbital eigenvalues (eV) -41.63452 -40.72608 -40.30300 -38.87798 -37.89888 -37.40442 -35.09423 -34.60344 -32.24250 -31.87966 -31.66440 -31.10689 -27.41501 -26.72876 -26.16648 -24.37532 -23.95838 -23.55298 -22.58334 -22.07323 -20.56818 -20.04805 -18.96697 -18.41331 -18.02113 -17.28119 -16.96584 -16.64604 -16.57713 -16.34203 -16.18662 -15.95987 -15.78602 -15.24062 -15.13221 -15.04211 -14.77146 -14.74988 -14.52801 -14.39210 -14.11999 -13.83923 -13.52455 -13.37097 -13.28119 -13.06746 -12.93946 -12.68366 -12.47184 -12.28962 -12.15116 -12.08794 -11.75901 -11.60187 -11.52000 -11.35722 -11.25761 -11.09061 -10.61916 -10.13943 -9.98292 -9.83113 -9.57821 -9.25902 -4.92555 -0.56011 0.18569 0.29119 0.39344 0.87809 1.17339 1.29996 1.58669 1.95694 2.12377 2.21174 2.63418 2.80290 3.39576 3.41874 3.53231 3.60724 3.66628 3.69887 3.80005 3.86797 3.94166 3.95879 4.11067 4.16261 4.17806 4.20411 4.35551 4.39608 4.40614 4.44820 4.57621 4.63891 4.72316 4.75638 4.82439 4.84669 4.91280 4.97141 4.98399 5.01584 5.08566 5.13852 5.16349 5.30319 5.37477 5.44008 5.47690 5.49967 5.59484 5.61717 5.87043 5.89801 6.46179 6.51538 7.19397 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.549 6.549 2 C -0.087 4.087 3 Si 0.769 3.231 4 C -0.109 4.109 5 C -0.106 4.106 6 C -0.102 4.102 7 C -0.081 4.081 8 C -0.019 4.019 9 C -0.209 4.209 10 C 0.545 3.455 11 O -0.589 6.589 12 N -0.696 5.696 13 C 0.116 3.884 14 H 0.089 0.911 15 C -0.139 4.139 16 C -0.075 4.075 17 H 0.105 0.895 18 C -0.070 4.070 19 C -0.050 4.050 20 Cl -0.074 7.074 21 C -0.121 4.121 22 C -0.117 4.117 23 C -0.116 4.116 24 C -0.112 4.112 25 C -0.122 4.122 26 C -0.095 4.095 27 C -0.124 4.124 28 H 0.386 0.614 29 H 0.124 0.876 30 H -0.306 1.306 31 H -0.278 1.278 32 H 0.130 0.870 33 H 0.137 0.863 34 H 0.123 0.877 35 H 0.163 0.837 36 H 0.416 0.584 37 H 0.102 0.898 38 H 0.067 0.933 39 H 0.139 0.861 40 H 0.149 0.851 41 H 0.148 0.852 42 H 0.147 0.853 43 H 0.085 0.915 44 H 0.105 0.895 45 H 0.156 0.844 46 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.553 2.738 2.489 5.130 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.357 6.357 2 C -0.196 4.196 3 Si 0.675 3.325 4 C -0.109 4.109 5 C -0.124 4.124 6 C -0.120 4.120 7 C -0.081 4.081 8 C -0.039 4.039 9 C -0.230 4.230 10 C 0.336 3.664 11 O -0.472 6.472 12 N -0.347 5.347 13 C 0.010 3.990 14 H 0.107 0.893 15 C -0.177 4.177 16 C -0.093 4.093 17 H 0.123 0.877 18 C -0.071 4.071 19 C -0.076 4.076 20 Cl -0.045 7.045 21 C -0.140 4.140 22 C -0.135 4.135 23 C -0.134 4.134 24 C -0.130 4.130 25 C -0.160 4.160 26 C -0.113 4.113 27 C -0.141 4.141 28 H 0.235 0.765 29 H 0.142 0.858 30 H -0.235 1.235 31 H -0.204 1.204 32 H 0.148 0.852 33 H 0.155 0.845 34 H 0.141 0.859 35 H 0.180 0.820 36 H 0.253 0.747 37 H 0.120 0.880 38 H 0.085 0.915 39 H 0.157 0.843 40 H 0.166 0.834 41 H 0.166 0.834 42 H 0.165 0.835 43 H 0.103 0.897 44 H 0.123 0.877 45 H 0.173 0.827 46 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges 3.273 2.561 1.979 4.603 hybrid contribution -1.033 0.246 0.267 1.095 sum 2.240 2.807 2.246 4.236 Atomic orbital electron populations 1.86583 1.18534 1.80410 1.50191 1.25304 0.83445 1.12085 0.98744 0.94031 0.90247 0.71848 0.76383 1.20528 0.98808 0.94819 0.96775 1.21094 0.99249 0.94164 0.97921 1.21620 0.96439 1.00709 0.93250 1.19121 1.00103 0.94265 0.94609 1.22371 0.91196 0.99585 0.90756 1.22993 1.03685 1.02126 0.94167 1.18732 0.77318 0.86318 0.84022 1.90814 1.59581 1.17393 1.79381 1.45480 1.55280 1.13698 1.20227 1.21825 0.95037 0.96750 0.85342 0.89274 1.23550 0.95633 0.97101 1.01440 1.21681 0.93068 0.99170 0.95427 0.87660 1.19711 0.96890 0.92617 0.97866 1.21036 1.00537 0.89978 0.96075 1.98359 1.96633 1.43462 1.66078 1.21302 0.97692 1.00460 0.94555 1.21443 1.00047 0.92629 0.99427 1.21592 0.95068 0.98910 0.97853 1.21256 0.98841 0.98134 0.94777 1.23365 0.94698 1.00179 0.97790 1.21644 0.98521 0.93210 0.97904 1.21210 0.98368 1.00609 0.93903 0.76456 0.85801 1.23498 1.20449 0.85206 0.84522 0.85884 0.81989 0.74651 0.87953 0.91468 0.84319 0.83352 0.83420 0.83548 0.89660 0.87663 0.82662 0.83508 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -1.11 12.83 -148.98 -1.91 -3.02 16 2 C -0.09 0.14 2.80 71.23 0.20 0.34 16 3 Si 0.77 -2.52 29.87 68.60 2.05 -0.47 16 4 C -0.11 0.13 5.36 -19.79 -0.11 0.03 16 5 C -0.11 -0.03 9.66 22.23 0.21 0.19 16 6 C -0.10 -0.02 9.80 22.57 0.22 0.20 16 7 C -0.08 0.03 5.87 -20.15 -0.12 -0.08 16 8 C -0.02 -0.02 9.46 23.84 0.23 0.21 16 9 C -0.21 0.29 9.41 23.62 0.22 0.51 16 10 C 0.55 2.13 7.74 86.37 0.67 2.80 16 11 O -0.59 -7.72 15.83 -4.33 -0.07 -7.78 16 12 N -0.70 1.20 5.26 -444.26 -2.34 -1.13 16 13 C 0.12 -0.12 4.32 45.52 0.20 0.07 16 14 H 0.09 0.27 7.46 -2.39 -0.02 0.25 16 15 C -0.14 0.27 7.25 31.12 0.23 0.49 16 16 C -0.08 0.21 3.65 -11.01 -0.04 0.17 16 17 H 0.11 -0.30 6.57 -2.39 -0.02 -0.32 16 18 C -0.07 0.04 5.29 -19.84 -0.10 -0.07 16 19 C -0.05 -0.07 6.31 22.32 0.14 0.08 16 20 Cl -0.07 -0.09 27.15 -2.72 -0.07 -0.16 16 21 C -0.12 0.00 9.83 22.29 0.22 0.22 16 22 C -0.12 0.26 10.05 22.27 0.22 0.48 16 23 C -0.12 0.35 10.05 22.27 0.22 0.57 16 24 C -0.11 0.27 8.61 22.26 0.19 0.46 16 25 C -0.12 0.53 7.29 31.12 0.23 0.75 16 26 C -0.10 0.34 9.41 22.57 0.21 0.55 16 27 C -0.12 0.43 8.65 22.23 0.19 0.62 16 28 H 0.39 -1.39 8.70 -74.06 -0.64 -2.03 16 29 H 0.12 -0.35 7.96 -2.39 -0.02 -0.37 16 30 H -0.31 -1.57 7.11 99.48 0.71 -0.87 16 31 H -0.28 0.08 7.00 99.48 0.70 0.78 16 32 H 0.13 -0.05 8.06 -2.91 -0.02 -0.08 16 33 H 0.14 -0.26 8.06 -2.91 -0.02 -0.28 16 34 H 0.12 0.43 7.52 -2.91 -0.02 0.41 16 35 H 0.16 -1.39 6.07 -2.91 -0.02 -1.41 16 36 H 0.42 -3.10 8.68 -92.70 -0.80 -3.91 16 37 H 0.10 -0.34 6.31 -2.39 -0.02 -0.35 16 38 H 0.07 0.02 8.14 -2.39 -0.02 0.00 16 39 H 0.14 -0.29 8.06 -2.91 -0.02 -0.31 16 40 H 0.15 -0.93 8.06 -2.91 -0.02 -0.95 16 41 H 0.15 -1.05 8.06 -2.91 -0.02 -1.08 16 42 H 0.15 -0.85 6.66 -2.91 -0.02 -0.87 16 43 H 0.08 -0.45 8.14 -2.39 -0.02 -0.47 16 44 H 0.11 -0.55 7.72 -2.38 -0.02 -0.57 16 45 H 0.16 -1.42 6.17 -2.91 -0.02 -1.43 16 46 H 0.15 -1.08 4.81 -2.91 -0.01 -1.09 16 Total: 0.00 -19.65 397.07 0.72 -18.94 By element: Atomic # 1 Polarization: -14.57 SS G_CDS: -0.38 Total: -14.95 kcal Atomic # 6 Polarization: 5.15 SS G_CDS: 3.44 Total: 8.59 kcal Atomic # 7 Polarization: 1.20 SS G_CDS: -2.34 Total: -1.13 kcal Atomic # 8 Polarization: -8.83 SS G_CDS: -1.98 Total: -10.81 kcal Atomic # 14 Polarization: -2.52 SS G_CDS: 2.05 Total: -0.47 kcal Atomic # 17 Polarization: -0.09 SS G_CDS: -0.07 Total: -0.16 kcal Total: -19.65 0.72 -18.94 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10565092_12360594.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 46.954 kcal (2) G-P(sol) polarization free energy of solvation -19.653 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 27.301 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.716 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.937 kcal (6) G-S(sol) free energy of system = (1) + (5) 28.017 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds