Wall clock time and date at job start Sat Mar 6 2021 13:13:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86295 * 109.47469 * 2 1 4 4 C 1.50693 * 109.47241 * 239.99571 * 2 1 3 5 5 C 1.38636 * 119.94061 * 75.00398 * 4 2 1 6 6 F 1.35098 * 119.87926 * 0.02562 * 5 4 2 7 7 C 1.38678 * 120.24007 * 180.02562 * 5 4 2 8 8 C 1.37816 * 120.12043 * 0.02562 * 7 5 4 9 9 C 1.39677 * 119.87729 * 359.97438 * 8 7 5 10 10 C 1.47724 * 120.11431 * 180.02562 * 9 8 7 11 11 O 1.21568 * 119.99735 * 180.02562 * 10 9 8 12 12 N 1.34770 * 120.00261 * 0.02562 * 10 9 8 13 13 C 1.46496 * 119.99991 * 179.97438 * 12 10 9 14 14 H 1.08993 * 112.85334 * 336.19852 * 13 12 10 15 15 C 1.53962 * 113.53546 * 107.50520 * 13 12 10 16 16 C 1.53787 * 87.01957 * 89.18971 * 15 13 12 17 17 H 1.09000 * 113.61351 * 270.77074 * 16 15 13 18 18 C 1.50697 * 113.61697 * 139.95094 * 16 15 13 19 19 C 1.38327 * 120.00607 * 140.88443 * 18 16 15 20 20 Cl 1.73599 * 120.01618 * 359.95819 * 19 18 16 21 21 C 1.38376 * 119.96955 * 179.97438 * 19 18 16 22 22 C 1.38187 * 119.99015 * 0.02562 * 21 19 18 23 23 C 1.38265 * 120.01179 * 0.02562 * 22 21 19 24 24 C 1.38213 * 120.03018 * 359.97438 * 23 22 21 25 25 C 1.53781 * 113.61345 * 204.99793 * 13 12 10 26 26 C 1.37864 * 119.94348 * 255.32627 * 4 2 1 27 27 H 0.96696 * 114.00128 * 60.00025 * 1 2 3 28 28 H 1.09007 * 109.47108 * 119.99409 * 2 1 3 29 29 H 1.48502 * 109.99895 * 298.68424 * 3 2 1 30 30 H 1.48506 * 110.00059 * 59.99385 * 3 2 1 31 31 H 1.07996 * 119.93924 * 180.02562 * 7 5 4 32 32 H 1.07995 * 120.06242 * 179.97438 * 8 7 5 33 33 H 0.97009 * 119.99998 * 359.97438 * 12 10 9 34 34 H 1.08999 * 113.66739 * 334.66103 * 15 13 12 35 35 H 1.09004 * 113.61151 * 203.70583 * 15 13 12 36 36 H 1.08008 * 120.00336 * 179.97438 * 21 19 18 37 37 H 1.08003 * 119.99774 * 179.97438 * 22 21 19 38 38 H 1.08002 * 119.98342 * 180.02562 * 23 22 21 39 39 H 1.07999 * 119.99708 * 180.27879 * 24 23 22 40 40 H 1.09005 * 113.61076 * 156.33618 * 25 13 12 41 41 H 1.08999 * 113.68970 * 25.44716 * 25 13 12 42 42 H 1.07994 * 120.05931 * 359.97164 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2303 5 6 1.8689 -0.0836 -2.4653 6 9 1.3581 1.1633 -2.5621 7 6 2.3289 -0.7318 -3.6016 8 6 2.8505 -2.0041 -3.5087 9 6 2.9157 -2.6403 -2.2670 10 6 3.4743 -4.0038 -2.1612 11 8 3.5297 -4.5558 -1.0795 12 7 3.9225 -4.6358 -3.2639 13 6 4.4770 -5.9878 -3.1589 14 1 4.8542 -6.2143 -2.1618 15 6 3.5540 -7.0772 -3.7348 16 6 4.2504 -6.8404 -5.0853 17 1 3.7768 -6.0679 -5.6912 18 6 4.5183 -8.1069 -5.8568 19 6 4.3545 -8.1281 -7.2302 20 17 3.8393 -6.6961 -8.0655 21 6 4.6012 -9.2913 -7.9378 22 6 5.0105 -10.4311 -7.2723 23 6 5.1729 -10.4095 -5.8994 24 6 4.9267 -9.2480 -5.1919 25 6 5.4638 -6.3380 -4.2852 26 6 2.4460 -1.9852 -1.1269 27 1 -0.3933 0.4417 -0.7650 28 1 1.7923 -0.5138 0.8901 29 1 1.5879 2.4585 -1.2242 30 1 1.5614 2.4679 1.2085 31 1 2.2783 -0.2388 -4.5612 32 1 3.2081 -2.5082 -4.3943 33 1 3.8780 -4.1956 -4.1272 34 1 2.4991 -6.8027 -3.7333 35 1 3.7352 -8.0680 -3.3180 36 1 4.4731 -9.3086 -9.0102 37 1 5.2027 -11.3392 -7.8245 38 1 5.4932 -11.3005 -5.3797 39 1 5.0581 -9.2306 -4.1200 40 1 6.1680 -7.1264 -4.0191 41 1 5.9493 -5.4685 -4.7282 42 1 2.4898 -2.4745 -0.1652 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10565092_12496548.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:13:42 Heat of formation + Delta-G solvation = -20.204563 kcal Electronic energy + Delta-G solvation = -28661.687410 eV Core-core repulsion = 24321.998133 eV Total energy + Delta-G solvation = -4339.689277 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.087 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -50.48591 -41.80663 -40.88885 -39.78077 -38.74985 -37.81080 -37.40065 -34.84896 -32.93752 -32.20038 -31.65625 -31.36332 -27.08256 -26.71426 -26.47467 -24.92438 -23.67594 -23.52695 -22.59338 -21.64894 -20.22700 -19.29168 -18.92450 -18.28345 -17.90536 -17.87897 -17.18627 -17.03754 -16.63227 -16.38824 -16.21193 -16.05156 -15.64754 -15.48080 -15.16727 -15.04196 -14.80094 -14.75956 -14.69505 -14.40417 -14.05261 -13.87153 -13.58833 -13.41286 -13.30982 -12.97934 -12.93345 -12.67845 -12.46491 -12.37134 -12.14919 -11.75675 -11.52198 -11.36580 -11.24930 -11.21139 -10.87643 -10.24414 -10.13308 -9.85565 -9.80536 -9.56940 -4.97642 -0.53563 0.00671 0.19293 0.29891 1.17754 1.18970 1.54424 1.58039 1.92028 1.98472 2.53735 2.64220 2.95436 3.22162 3.41524 3.44330 3.51204 3.58368 3.61763 3.69413 3.87828 3.95022 3.96651 4.09670 4.11897 4.18486 4.30838 4.40625 4.41247 4.60222 4.64741 4.73729 4.75743 4.77287 4.83698 4.87472 4.91975 4.98333 4.99830 5.02608 5.07111 5.13985 5.30934 5.41448 5.50523 5.56546 5.60973 5.87772 6.29802 6.40940 7.08619 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.543 6.543 2 C -0.083 4.083 3 Si 0.750 3.250 4 C -0.155 4.155 5 C 0.109 3.891 6 F -0.130 7.130 7 C -0.147 4.147 8 C -0.041 4.041 9 C -0.152 4.152 10 C 0.564 3.436 11 O -0.572 6.572 12 N -0.695 5.695 13 C 0.118 3.882 14 H 0.095 0.905 15 C -0.140 4.140 16 C -0.077 4.077 17 H 0.106 0.894 18 C -0.070 4.070 19 C -0.050 4.050 20 Cl -0.074 7.074 21 C -0.122 4.122 22 C -0.118 4.118 23 C -0.117 4.117 24 C -0.111 4.111 25 C -0.121 4.121 26 C -0.020 4.020 27 H 0.384 0.616 28 H 0.131 0.869 29 H -0.253 1.253 30 H -0.307 1.307 31 H 0.170 0.830 32 H 0.171 0.829 33 H 0.414 0.586 34 H 0.066 0.934 35 H 0.103 0.897 36 H 0.138 0.862 37 H 0.148 0.852 38 H 0.148 0.852 39 H 0.148 0.852 40 H 0.107 0.893 41 H 0.088 0.912 42 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.617 -2.160 -5.070 7.190 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.351 6.351 2 C -0.192 4.192 3 Si 0.654 3.346 4 C -0.156 4.156 5 C 0.090 3.910 6 F -0.109 7.109 7 C -0.166 4.166 8 C -0.059 4.059 9 C -0.155 4.155 10 C 0.352 3.648 11 O -0.452 6.452 12 N -0.346 5.346 13 C 0.012 3.988 14 H 0.113 0.887 15 C -0.178 4.178 16 C -0.095 4.095 17 H 0.124 0.876 18 C -0.070 4.070 19 C -0.076 4.076 20 Cl -0.045 7.045 21 C -0.141 4.141 22 C -0.136 4.136 23 C -0.134 4.134 24 C -0.129 4.129 25 C -0.159 4.159 26 C -0.039 4.039 27 H 0.233 0.767 28 H 0.149 0.851 29 H -0.178 1.178 30 H -0.235 1.235 31 H 0.188 0.812 32 H 0.188 0.812 33 H 0.253 0.747 34 H 0.085 0.915 35 H 0.121 0.879 36 H 0.156 0.844 37 H 0.165 0.835 38 H 0.165 0.835 39 H 0.166 0.834 40 H 0.125 0.875 41 H 0.107 0.893 42 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges 4.481 -1.865 -3.869 6.207 hybrid contribution -1.540 0.329 -0.905 1.816 sum 2.941 -1.537 -4.775 5.814 Atomic orbital electron populations 1.86622 1.18160 1.80278 1.50058 1.25169 0.83572 1.12133 0.98284 0.94630 0.90263 0.72714 0.76987 1.20148 1.04613 0.96302 0.94530 1.18114 0.97646 0.80352 0.94896 1.91557 1.84673 1.38192 1.96440 1.21388 1.00648 0.95910 0.98604 1.21489 0.94112 0.93440 0.96895 1.19967 1.05484 0.94803 0.95286 1.18318 0.77053 0.85472 0.83923 1.90799 1.57286 1.68288 1.28871 1.45475 1.62270 1.16548 1.10333 1.21905 0.95151 0.81349 1.00374 0.88722 1.23596 0.99426 1.00004 0.94818 1.21712 0.98480 0.94598 0.94747 0.87639 1.19714 0.99402 0.96653 0.91260 1.21036 1.04824 0.89010 0.92775 1.98358 1.89410 1.38815 1.77944 1.21296 0.99940 0.91750 1.01091 1.21437 0.98753 0.98331 0.95101 1.21593 0.98422 0.99011 0.94423 1.21258 0.98809 0.91658 1.01207 1.23374 0.95773 1.02510 0.94276 1.21028 0.92028 0.91550 0.99263 0.76747 0.85129 1.17815 1.23512 0.81206 0.81170 0.74739 0.91514 0.87896 0.84413 0.83458 0.83460 0.83428 0.87476 0.89343 0.84097 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -2.68 12.88 -148.98 -1.92 -4.60 16 2 C -0.08 -0.11 2.80 71.23 0.20 0.09 16 3 Si 0.75 0.38 30.81 68.60 2.11 2.50 16 4 C -0.15 -0.07 4.78 -19.86 -0.09 -0.17 16 5 C 0.11 -0.10 6.63 22.47 0.15 0.05 16 6 F -0.13 -0.19 12.57 44.97 0.57 0.37 16 7 C -0.15 0.80 10.01 22.27 0.22 1.02 16 8 C -0.04 0.27 9.54 22.52 0.21 0.48 16 9 C -0.15 0.10 5.87 -20.09 -0.12 -0.01 16 10 C 0.56 1.41 7.77 86.75 0.67 2.08 16 11 O -0.57 -6.34 15.94 -3.93 -0.06 -6.41 16 12 N -0.69 2.59 5.21 -442.75 -2.31 0.29 16 13 C 0.12 -0.38 4.33 45.58 0.20 -0.18 16 14 H 0.09 0.04 7.46 -2.39 -0.02 0.02 16 15 C -0.14 0.48 7.27 31.18 0.23 0.71 16 16 C -0.08 0.34 3.65 -11.01 -0.04 0.30 16 17 H 0.11 -0.49 6.55 -2.39 -0.02 -0.50 16 18 C -0.07 0.12 5.29 -19.84 -0.11 0.01 16 19 C -0.05 -0.02 6.31 22.32 0.14 0.12 16 20 Cl -0.07 -0.02 27.15 -2.72 -0.07 -0.09 16 21 C -0.12 0.07 9.83 22.29 0.22 0.28 16 22 C -0.12 0.32 10.05 22.26 0.22 0.54 16 23 C -0.12 0.43 10.05 22.27 0.22 0.65 16 24 C -0.11 0.38 8.54 22.27 0.19 0.57 16 25 C -0.12 0.78 7.29 31.12 0.23 1.00 16 26 C -0.02 -0.03 9.21 22.52 0.21 0.18 16 27 H 0.38 -0.04 8.41 -74.06 -0.62 -0.66 16 28 H 0.13 -0.07 7.77 -2.38 -0.02 -0.08 16 29 H -0.25 -0.99 5.27 99.48 0.52 -0.47 16 30 H -0.31 -2.53 7.11 99.48 0.71 -1.82 16 31 H 0.17 -1.72 8.06 -2.91 -0.02 -1.74 16 32 H 0.17 -2.34 6.40 -2.91 -0.02 -2.36 16 33 H 0.41 -3.98 6.73 -92.70 -0.62 -4.60 16 34 H 0.07 -0.07 8.14 -2.39 -0.02 -0.09 16 35 H 0.10 -0.48 6.40 -2.38 -0.02 -0.50 16 36 H 0.14 -0.34 8.06 -2.91 -0.02 -0.37 16 37 H 0.15 -0.97 8.06 -2.91 -0.02 -0.99 16 38 H 0.15 -1.13 8.06 -2.91 -0.02 -1.16 16 39 H 0.15 -1.04 6.73 -2.91 -0.02 -1.06 16 40 H 0.11 -0.78 7.64 -2.38 -0.02 -0.80 16 41 H 0.09 -0.69 8.14 -2.39 -0.02 -0.70 16 42 H 0.14 0.41 7.59 -2.91 -0.02 0.39 16 Total: 0.00 -18.68 366.33 0.98 -17.70 By element: Atomic # 1 Polarization: -17.20 SS G_CDS: -0.29 Total: -17.49 kcal Atomic # 6 Polarization: 4.79 SS G_CDS: 2.96 Total: 7.74 kcal Atomic # 7 Polarization: 2.59 SS G_CDS: -2.31 Total: 0.29 kcal Atomic # 8 Polarization: -9.03 SS G_CDS: -1.98 Total: -11.01 kcal Atomic # 9 Polarization: -0.19 SS G_CDS: 0.57 Total: 0.37 kcal Atomic # 14 Polarization: 0.38 SS G_CDS: 2.11 Total: 2.50 kcal Atomic # 17 Polarization: -0.02 SS G_CDS: -0.07 Total: -0.09 kcal Total: -18.68 0.98 -17.70 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10565092_12496548.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -2.507 kcal (2) G-P(sol) polarization free energy of solvation -18.678 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -21.185 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.981 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.698 kcal (6) G-S(sol) free energy of system = (1) + (5) -20.205 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.00 seconds