Wall clock time and date at job start Sat Mar 6 2021 13:14:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.39283 * 121.03169 * 2 1 4 4 C 1.46497 * 134.19606 * 359.94957 * 3 2 1 5 5 C 1.50694 * 126.60286 * 0.04696 * 4 3 2 6 6 O 1.42900 * 109.47219 * 74.99970 * 5 4 3 7 7 Si 1.86305 * 109.47181 * 194.99708 * 5 4 3 8 8 C 1.34184 * 106.79675 * 180.02562 * 4 3 2 9 9 N 1.36939 * 109.95404 * 359.97438 * 8 4 3 10 10 C 1.37159 * 110.11392 * 0.02562 * 9 8 4 11 11 N 1.32823 * 132.96582 * 180.02562 * 10 9 8 12 12 C 1.31304 * 121.89210 * 179.73739 * 11 10 9 13 13 C 1.39753 * 121.03061 * 179.97438 * 2 1 3 14 14 C 1.47663 * 120.45358 * 0.02684 * 13 2 1 15 15 O 1.21578 * 120.00020 * 354.29464 * 14 13 2 16 16 N 1.34778 * 120.00014 * 174.29937 * 14 13 2 17 17 C 1.46500 * 119.99984 * 179.97438 * 16 14 13 18 18 H 1.08999 * 112.85407 * 336.19749 * 17 16 14 19 19 C 1.53789 * 113.61150 * 107.50406 * 17 16 14 20 20 C 1.53782 * 87.07885 * 89.11463 * 19 17 16 21 21 H 1.08997 * 113.69242 * 270.86914 * 20 19 17 22 22 C 1.50705 * 113.61131 * 139.98090 * 20 19 17 23 23 C 1.38328 * 120.00576 * 142.73048 * 22 20 19 24 24 Cl 1.73602 * 120.01426 * 0.04763 * 23 22 20 25 25 C 1.38374 * 119.97004 * 180.29706 * 23 22 20 26 26 C 1.38188 * 119.99078 * 359.45445 * 25 23 22 27 27 C 1.38264 * 120.00818 * 0.26919 * 26 25 23 28 28 C 1.38220 * 120.03189 * 0.02844 * 27 26 25 29 29 C 1.53779 * 87.08369 * 25.43391 * 20 19 17 30 30 H 1.08997 * 109.47200 * 263.73439 * 1 2 3 31 31 H 1.09001 * 109.47423 * 23.73969 * 1 2 3 32 32 H 1.09009 * 109.47084 * 143.73408 * 1 2 3 33 33 H 1.08998 * 109.47543 * 315.00036 * 5 4 3 34 34 H 0.96699 * 114.00432 * 59.99635 * 6 5 4 35 35 H 1.48503 * 109.99952 * 58.68291 * 7 5 4 36 36 H 1.48500 * 109.99984 * 180.02562 * 7 5 4 37 37 H 1.07998 * 125.01851 * 179.97438 * 8 4 3 38 38 H 0.97003 * 124.94440 * 180.02562 * 9 8 4 39 39 H 1.07999 * 119.31670 * 180.26864 * 12 11 10 40 40 H 0.96997 * 119.99596 * 0.02562 * 16 14 13 41 41 H 1.09002 * 113.61519 * 334.56349 * 19 17 16 42 42 H 1.09002 * 113.61028 * 203.66372 * 19 17 16 43 43 H 1.08008 * 120.00302 * 179.72363 * 25 23 22 44 44 H 1.07994 * 119.99800 * 180.25821 * 26 25 23 45 45 H 1.08005 * 119.98479 * 180.02562 * 27 26 25 46 46 H 1.07995 * 119.99500 * 179.97438 * 28 27 26 47 47 H 1.08994 * 113.61650 * 89.11268 * 29 20 19 48 48 H 1.09000 * 113.61208 * 220.01752 * 29 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2250 1.1935 0.0000 4 6 1.8515 2.6100 -0.0009 5 6 0.4526 3.1704 -0.0012 6 8 -0.1192 3.0247 1.3002 7 14 0.5071 4.9760 -0.4570 8 6 2.9948 3.3125 -0.0010 9 7 4.0668 2.4605 0.0004 10 6 3.6347 1.1587 0.0009 11 7 4.2720 -0.0066 0.0025 12 6 3.6267 -1.1501 0.0077 13 6 2.2274 -1.1975 0.0005 14 6 1.5225 -2.4950 0.0005 15 8 0.3117 -2.5290 0.1047 16 7 2.2214 -3.6417 -0.1149 17 6 1.5220 -4.9290 -0.1144 18 1 0.5518 -4.8834 0.3803 19 6 1.4813 -5.6084 -1.4934 20 6 2.8163 -6.2731 -1.1180 21 1 3.6913 -5.6839 -1.3924 22 6 2.9186 -7.7115 -1.5558 23 6 4.1243 -8.2109 -2.0144 24 17 5.5203 -7.1813 -2.0848 25 6 4.2159 -9.5301 -2.4220 26 6 3.1059 -10.3508 -2.3601 27 6 1.9025 -9.8526 -1.8961 28 6 1.8087 -8.5333 -1.4946 29 6 2.3965 -6.1049 0.3518 30 1 -0.3633 -0.1122 1.0215 31 1 -0.3634 0.9407 -0.4137 32 1 -0.3634 -0.8287 -0.6079 33 1 -0.1549 2.6305 -0.7275 34 1 0.3706 3.4805 1.9984 35 1 1.1288 5.1436 -1.7951 36 1 -0.8664 5.5407 -0.4602 37 1 3.0598 4.3906 -0.0019 38 1 4.9965 2.7373 0.0011 39 1 4.1869 -2.0735 0.0133 40 1 3.1874 -3.6145 -0.1976 41 1 1.5602 -4.9102 -2.3267 42 1 0.6589 -6.3146 -1.6080 43 1 5.1559 -9.9193 -2.7844 44 1 3.1783 -11.3815 -2.6742 45 1 1.0353 -10.4945 -1.8475 46 1 0.8683 -8.1446 -1.1328 47 1 1.8244 -6.9468 0.7416 48 1 3.2144 -5.8075 1.0082 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10565092_12890568.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:14:00 Heat of formation + Delta-G solvation = 60.867681 kcal Electronic energy + Delta-G solvation = -33804.576249 eV Core-core repulsion = 29239.477163 eV Total energy + Delta-G solvation = -4565.099086 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 398.118 amu Computer time = 1.31 seconds Orbital eigenvalues (eV) -42.87093 -41.65665 -40.58542 -39.16962 -38.52217 -37.68291 -37.41006 -35.24698 -34.63975 -32.14840 -31.82992 -31.66487 -30.74689 -28.96385 -26.72472 -26.67702 -26.13487 -24.76081 -24.07022 -23.62875 -22.59306 -22.02310 -20.66211 -20.19855 -19.37041 -18.81191 -18.22370 -17.61672 -17.50461 -17.11750 -16.78568 -16.63882 -16.43472 -16.36554 -15.99202 -15.58029 -15.55422 -15.27804 -15.14156 -14.82530 -14.76536 -14.60938 -14.43369 -14.19946 -14.03611 -13.78168 -13.69188 -13.49649 -13.36893 -13.33180 -13.11041 -12.91178 -12.66874 -12.47468 -12.30906 -12.14303 -12.01712 -11.75867 -11.51501 -11.25131 -11.24141 -11.15303 -10.54246 -10.19959 -10.16805 -9.83480 -9.64433 -9.57696 -9.11696 -4.98661 -0.37150 -0.10096 0.18434 0.29108 1.17166 1.35099 1.42759 1.65092 1.73893 1.77105 1.99907 2.05554 2.63296 2.72680 3.28378 3.41515 3.47042 3.59013 3.60226 3.62016 3.66049 3.71965 3.76271 3.86744 3.96110 4.10842 4.13322 4.17996 4.25551 4.29678 4.34816 4.39710 4.40419 4.57532 4.63833 4.69084 4.72580 4.76401 4.77231 4.84368 4.89237 4.98685 4.99333 5.01978 5.10868 5.19373 5.22176 5.30239 5.36589 5.43526 5.49701 5.60821 5.72358 5.87027 6.22202 6.42539 6.81128 6.88880 7.12521 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.110 4.110 2 C 0.060 3.940 3 C -0.166 4.166 4 C -0.206 4.206 5 C -0.050 4.050 6 O -0.557 6.557 7 Si 0.803 3.197 8 C 0.096 3.904 9 N -0.560 5.560 10 C 0.287 3.713 11 N -0.516 5.516 12 C 0.178 3.822 13 C -0.241 4.241 14 C 0.574 3.426 15 O -0.562 6.562 16 N -0.698 5.698 17 C 0.120 3.880 18 H 0.095 0.905 19 C -0.139 4.139 20 C -0.077 4.077 21 H 0.103 0.897 22 C -0.069 4.069 23 C -0.050 4.050 24 Cl -0.076 7.076 25 C -0.122 4.122 26 C -0.118 4.118 27 C -0.116 4.116 28 C -0.111 4.111 29 C -0.122 4.122 30 H 0.075 0.925 31 H 0.070 0.930 32 H 0.082 0.918 33 H 0.096 0.904 34 H 0.394 0.606 35 H -0.281 1.281 36 H -0.305 1.305 37 H 0.232 0.768 38 H 0.439 0.561 39 H 0.190 0.810 40 H 0.411 0.589 41 H 0.065 0.935 42 H 0.105 0.895 43 H 0.138 0.862 44 H 0.149 0.851 45 H 0.149 0.851 46 H 0.148 0.852 47 H 0.108 0.892 48 H 0.085 0.915 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.788 1.945 1.391 4.480 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.166 4.166 2 C 0.052 3.948 3 C -0.173 4.173 4 C -0.214 4.214 5 C -0.158 4.158 6 O -0.365 6.365 7 Si 0.708 3.292 8 C -0.030 4.030 9 N -0.166 5.166 10 C 0.053 3.947 11 N -0.229 5.229 12 C 0.010 3.990 13 C -0.248 4.248 14 C 0.362 3.638 15 O -0.442 6.442 16 N -0.349 5.349 17 C 0.014 3.986 18 H 0.113 0.887 19 C -0.177 4.177 20 C -0.096 4.096 21 H 0.121 0.879 22 C -0.070 4.070 23 C -0.077 4.077 24 Cl -0.047 7.047 25 C -0.140 4.140 26 C -0.136 4.136 27 C -0.134 4.134 28 C -0.129 4.129 29 C -0.160 4.160 30 H 0.093 0.907 31 H 0.089 0.911 32 H 0.100 0.900 33 H 0.113 0.887 34 H 0.244 0.756 35 H -0.207 1.207 36 H -0.233 1.233 37 H 0.248 0.752 38 H 0.281 0.719 39 H 0.207 0.793 40 H 0.249 0.751 41 H 0.083 0.917 42 H 0.123 0.877 43 H 0.156 0.844 44 H 0.166 0.834 45 H 0.166 0.834 46 H 0.166 0.834 47 H 0.126 0.874 48 H 0.104 0.896 Dipole moment (debyes) X Y Z Total from point charges 3.435 2.430 0.578 4.248 hybrid contribution 0.102 -0.760 -0.457 0.892 sum 3.537 1.671 0.121 3.914 Atomic orbital electron populations 1.20986 0.89396 1.02986 1.03257 1.20068 0.97010 0.90249 0.87486 1.19777 0.93311 0.94525 1.09713 1.20813 0.96398 0.90242 1.13914 1.24788 0.89862 1.12396 0.88788 1.86494 1.54418 1.78652 1.16918 0.94069 0.80650 0.72586 0.81944 1.22407 0.83620 0.97376 0.99625 1.41628 1.10737 1.01629 1.62650 1.18783 0.89494 0.86922 0.99459 1.66501 1.40864 0.96502 1.19012 1.22905 0.89706 0.95268 0.91141 1.20480 0.95398 0.93337 1.15605 1.17968 0.86463 0.83878 0.75444 1.90740 1.14921 1.87424 1.51146 1.45466 1.10971 1.04550 1.73955 1.21848 0.97169 0.81963 0.97583 0.88653 1.23562 0.97374 0.99504 0.97290 1.21694 0.99201 0.91457 0.97205 0.87897 1.19708 0.91833 0.96517 0.98950 1.21044 0.88739 0.92622 1.05289 1.98361 1.41277 1.67902 1.97134 1.21295 1.00677 0.91881 1.00182 1.21438 0.92197 1.00810 0.99113 1.21597 0.98661 0.95794 0.97331 1.21261 0.98376 0.93620 0.99670 1.23377 0.99901 0.97520 0.95186 0.90685 0.91143 0.90001 0.88691 0.75621 1.20742 1.23309 0.75188 0.71949 0.79322 0.75150 0.91660 0.87701 0.84390 0.83357 0.83369 0.83412 0.87369 0.89607 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -1.06 8.69 71.24 0.62 -0.44 16 2 C 0.06 0.53 5.98 -19.25 -0.12 0.42 16 3 C -0.17 -1.05 6.16 -20.19 -0.12 -1.18 16 4 C -0.21 -0.04 5.57 -18.64 -0.10 -0.14 16 5 C -0.05 0.02 2.06 71.23 0.15 0.17 16 6 O -0.56 -0.40 12.88 -148.98 -1.92 -2.32 16 7 Si 0.80 -4.13 30.77 68.60 2.11 -2.02 16 8 C 0.10 -0.61 10.44 82.97 0.87 0.25 16 9 N -0.56 1.86 6.04 -192.26 -1.16 0.70 16 10 C 0.29 1.36 8.42 134.02 1.13 2.48 16 11 N -0.52 -2.96 10.37 -191.76 -1.99 -4.95 16 12 C 0.18 0.56 10.67 85.20 0.91 1.47 16 13 C -0.24 -1.60 5.89 -19.99 -0.12 -1.71 16 14 C 0.57 4.04 7.72 86.73 0.67 4.71 16 15 O -0.56 -7.63 13.09 -3.96 -0.05 -7.68 16 16 N -0.70 -0.23 5.21 -443.05 -2.31 -2.54 16 17 C 0.12 -0.05 4.32 45.52 0.20 0.14 16 18 H 0.10 0.27 7.46 -2.39 -0.02 0.25 16 19 C -0.14 0.17 7.25 31.12 0.23 0.39 16 20 C -0.08 0.15 3.64 -11.01 -0.04 0.11 16 21 H 0.10 -0.15 6.58 -2.39 -0.02 -0.17 16 22 C -0.07 -0.01 5.29 -19.84 -0.10 -0.12 16 23 C -0.05 -0.11 6.31 22.32 0.14 0.03 16 24 Cl -0.08 -0.19 27.16 -2.72 -0.07 -0.26 16 25 C -0.12 -0.10 9.83 22.29 0.22 0.12 16 26 C -0.12 0.19 10.05 22.26 0.22 0.41 16 27 C -0.12 0.29 10.05 22.27 0.22 0.51 16 28 C -0.11 0.21 8.61 22.27 0.19 0.40 16 29 C -0.12 0.45 7.29 31.12 0.23 0.68 16 30 H 0.07 0.85 8.14 -2.39 -0.02 0.83 16 31 H 0.07 0.57 5.05 -2.39 -0.01 0.56 16 32 H 0.08 1.00 5.94 -2.38 -0.01 0.99 16 33 H 0.10 0.29 6.05 -2.39 -0.01 0.28 16 34 H 0.39 -3.18 8.70 -74.06 -0.64 -3.82 16 35 H -0.28 0.22 7.11 99.48 0.71 0.93 16 36 H -0.31 -1.12 7.11 99.48 0.71 -0.41 16 37 H 0.23 -3.80 6.35 -2.91 -0.02 -3.81 16 38 H 0.44 -3.93 8.96 -92.71 -0.83 -4.76 16 39 H 0.19 -0.83 6.43 -2.91 -0.02 -0.85 16 40 H 0.41 -1.91 6.78 -92.71 -0.63 -2.54 16 41 H 0.06 0.09 8.14 -2.39 -0.02 0.07 16 42 H 0.10 -0.31 6.31 -2.39 -0.02 -0.33 16 43 H 0.14 -0.17 8.06 -2.91 -0.02 -0.19 16 44 H 0.15 -0.84 8.06 -2.91 -0.02 -0.87 16 45 H 0.15 -1.00 8.06 -2.91 -0.02 -1.02 16 46 H 0.15 -0.82 6.66 -2.91 -0.02 -0.84 16 47 H 0.11 -0.55 7.72 -2.39 -0.02 -0.56 16 48 H 0.09 -0.40 8.14 -2.39 -0.02 -0.41 16 Total: 0.00 -26.05 401.57 -0.99 -27.04 By element: Atomic # 1 Polarization: -15.71 SS G_CDS: -0.98 Total: -16.69 kcal Atomic # 6 Polarization: 3.34 SS G_CDS: 5.38 Total: 8.72 kcal Atomic # 7 Polarization: -1.33 SS G_CDS: -5.46 Total: -6.79 kcal Atomic # 8 Polarization: -8.02 SS G_CDS: -1.97 Total: -9.99 kcal Atomic # 14 Polarization: -4.13 SS G_CDS: 2.11 Total: -2.02 kcal Atomic # 17 Polarization: -0.19 SS G_CDS: -0.07 Total: -0.26 kcal Total: -26.05 -0.99 -27.04 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10565092_12890568.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 87.908 kcal (2) G-P(sol) polarization free energy of solvation -26.047 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 61.861 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.993 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.041 kcal (6) G-S(sol) free energy of system = (1) + (5) 60.868 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.31 seconds