Wall clock time and date at job start Sat Mar 6 2021 13:14:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86297 * 109.47340 * 2 1 4 4 C 1.50696 * 109.47308 * 120.00270 * 2 1 3 5 5 C 1.38895 * 119.67781 * 245.00398 * 4 2 1 6 6 C 1.36474 * 120.61510 * 179.69767 * 5 4 2 7 7 C 1.40060 * 119.83104 * 0.02562 * 6 5 4 8 8 C 1.41589 * 133.37966 * 180.02562 * 7 6 5 9 9 C 1.35865 * 107.72773 * 180.02562 * 8 7 6 10 10 C 1.47061 * 125.42212 * 179.97438 * 9 8 7 11 11 O 1.21645 * 120.00619 * 0.02562 * 10 9 8 12 12 N 1.34780 * 119.99509 * 180.02562 * 10 9 8 13 13 C 1.46501 * 119.99661 * 179.97438 * 12 10 9 14 14 H 1.08995 * 112.85624 * 336.19910 * 13 12 10 15 15 C 1.53788 * 113.60931 * 107.50601 * 13 12 10 16 16 C 1.53786 * 87.08106 * 89.11698 * 15 13 12 17 17 H 1.09002 * 113.68663 * 270.87621 * 16 15 13 18 18 C 1.50699 * 113.61685 * 139.98065 * 16 15 13 19 19 C 1.38324 * 120.00734 * 142.49741 * 18 16 15 20 20 Cl 1.73605 * 120.01487 * 0.02562 * 19 18 16 21 21 C 1.38376 * 119.97107 * 179.97438 * 19 18 16 22 22 C 1.38186 * 119.98866 * 0.02562 * 21 19 18 23 23 C 1.38265 * 120.01624 * 0.02562 * 22 21 19 24 24 C 1.38223 * 120.02168 * 359.71013 * 23 22 21 25 25 C 1.53779 * 87.07940 * 25.43102 * 16 15 13 26 26 N 1.38147 * 109.14891 * 359.97438 * 9 8 7 27 27 C 1.37490 * 108.78968 * 0.02562 * 26 9 8 28 28 C 1.37722 * 119.67173 * 64.72168 * 4 2 1 29 29 H 0.96697 * 114.00059 * 299.99876 * 1 2 3 30 30 H 1.09003 * 109.46871 * 240.00219 * 2 1 3 31 31 H 1.48497 * 110.00133 * 178.67848 * 3 2 1 32 32 H 1.48499 * 109.99989 * 300.00427 * 3 2 1 33 33 H 1.08000 * 119.69068 * 359.71955 * 5 4 2 34 34 H 1.08003 * 120.07939 * 179.97438 * 6 5 4 35 35 H 1.08000 * 126.13631 * 359.96074 * 8 7 6 36 36 H 0.96999 * 120.00188 * 0.02562 * 12 10 9 37 37 H 1.08995 * 113.61416 * 203.65999 * 15 13 12 38 38 H 1.08997 * 113.61560 * 334.56762 * 15 13 12 39 39 H 1.08002 * 120.00470 * 179.97438 * 21 19 18 40 40 H 1.08003 * 119.99567 * 179.97438 * 22 21 19 41 41 H 1.07994 * 119.98912 * 180.02562 * 23 22 21 42 42 H 1.08001 * 119.99325 * 180.29013 * 24 23 22 43 43 H 1.09002 * 113.61037 * 220.01660 * 25 16 15 44 44 H 1.09004 * 113.61508 * 89.12054 * 25 16 15 45 45 H 0.96999 * 125.60551 * 180.02562 * 26 9 8 46 46 H 1.07991 * 120.09785 * 0.26144 * 28 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 2.6414 -0.0025 2.1916 6 6 3.0999 -0.6253 3.3160 7 6 2.8543 -1.9912 3.5052 8 6 3.1854 -2.9054 4.5344 9 6 2.6844 -4.1194 4.1864 10 6 2.8060 -5.3512 4.9805 11 8 3.3945 -5.3331 6.0450 12 7 2.2653 -6.5002 4.5289 13 6 2.3870 -7.7274 5.3197 14 1 3.2386 -7.7102 5.9997 15 6 1.0718 -8.1628 5.9873 16 6 0.7744 -8.9560 4.7038 17 1 0.2430 -8.3799 3.9462 18 6 0.1509 -10.3042 4.9581 19 6 -0.8275 -10.7855 4.1070 20 17 -1.3371 -9.8371 2.7451 21 6 -1.3992 -12.0238 4.3409 22 6 -0.9928 -12.7785 5.4247 23 6 -0.0155 -12.2965 6.2758 24 6 0.5598 -11.0620 6.0396 25 6 2.2948 -9.0127 4.4804 26 7 2.0426 -4.0123 2.9677 27 6 2.1354 -2.7119 2.5311 28 6 1.6769 -2.0541 1.3935 29 1 -0.3933 0.4417 0.7650 30 1 1.7923 -0.5138 -0.8900 31 1 3.5346 1.7702 0.0322 32 1 1.5615 2.4679 -1.2084 33 1 2.8321 1.0508 2.0479 34 1 3.6514 -0.0666 4.0576 35 1 3.7380 -2.6786 5.4342 36 1 1.7964 -6.5147 3.6799 37 1 1.2154 -8.7918 6.8658 38 1 0.3782 -7.3405 6.1630 39 1 -2.1635 -12.3999 3.6769 40 1 -1.4392 -13.7448 5.6076 41 1 0.3020 -12.8868 7.1225 42 1 1.3264 -10.6880 6.7020 43 1 2.5885 -8.8766 3.4396 44 1 2.7729 -9.8741 4.9470 45 1 1.5993 -4.7357 2.4974 46 1 1.1237 -2.5958 0.6407 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10565092_13158378.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:14:08 Heat of formation + Delta-G solvation = 46.729457 kcal Electronic energy + Delta-G solvation = -30837.874495 eV Core-core repulsion = 26493.125859 eV Total energy + Delta-G solvation = -4344.748636 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 383.108 amu Computer time = 1.41 seconds Orbital eigenvalues (eV) -42.75290 -41.59650 -40.39828 -39.14603 -38.71192 -37.44933 -36.88427 -34.84456 -33.29804 -31.99770 -31.69242 -30.97445 -30.42526 -27.32045 -26.78682 -26.10695 -24.54348 -23.72172 -23.21515 -22.61253 -22.02574 -21.33683 -20.30446 -19.60182 -18.50247 -18.24819 -17.79749 -17.13483 -16.88072 -16.66463 -16.56553 -16.36191 -16.13586 -15.70286 -15.55700 -15.35203 -15.10385 -14.94601 -14.81821 -14.77871 -14.69545 -14.52473 -14.44203 -14.09514 -13.58873 -13.43391 -13.17878 -12.98663 -12.73888 -12.57890 -12.54322 -12.50843 -12.19627 -12.06115 -11.83847 -11.66337 -11.61404 -11.42936 -11.31612 -10.98030 -10.43808 -10.32281 -9.86256 -9.61360 -9.35214 -8.85558 -4.94556 -0.40171 0.15514 0.26380 0.51330 0.91204 1.13304 1.33991 1.67962 1.70992 1.89202 2.02051 2.12667 2.60519 2.75740 3.33929 3.45616 3.54252 3.55958 3.63066 3.69062 3.72784 3.81596 3.91246 4.02822 4.06840 4.13316 4.22785 4.27790 4.36170 4.37445 4.42948 4.47629 4.55868 4.61714 4.68849 4.72070 4.76289 4.82391 4.87071 4.93500 4.96798 4.97687 5.03958 5.25707 5.28040 5.36671 5.39464 5.47124 5.51033 5.52937 5.56521 5.84452 5.96421 6.19377 6.37582 6.78878 6.88849 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.555 6.555 2 C -0.072 4.072 3 Si 0.778 3.222 4 C -0.089 4.089 5 C -0.146 4.146 6 C -0.057 4.057 7 C -0.134 4.134 8 C -0.114 4.114 9 C 0.008 3.992 10 C 0.590 3.410 11 O -0.555 6.555 12 N -0.698 5.698 13 C 0.117 3.883 14 H 0.099 0.901 15 C -0.138 4.138 16 C -0.078 4.078 17 H 0.102 0.898 18 C -0.070 4.070 19 C -0.051 4.051 20 Cl -0.077 7.077 21 C -0.122 4.122 22 C -0.117 4.117 23 C -0.115 4.115 24 C -0.111 4.111 25 C -0.122 4.122 26 N -0.566 5.566 27 C 0.107 3.893 28 C -0.112 4.112 29 H 0.396 0.604 30 H 0.108 0.892 31 H -0.286 1.286 32 H -0.302 1.302 33 H 0.150 0.850 34 H 0.150 0.850 35 H 0.158 0.842 36 H 0.409 0.591 37 H 0.108 0.892 38 H 0.067 0.933 39 H 0.138 0.862 40 H 0.149 0.851 41 H 0.149 0.851 42 H 0.150 0.850 43 H 0.083 0.917 44 H 0.110 0.890 45 H 0.429 0.571 46 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.425 -1.847 1.126 2.590 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.363 6.363 2 C -0.182 4.182 3 Si 0.684 3.316 4 C -0.091 4.091 5 C -0.164 4.164 6 C -0.075 4.075 7 C -0.139 4.139 8 C -0.141 4.141 9 C -0.101 4.101 10 C 0.377 3.623 11 O -0.433 6.433 12 N -0.348 5.348 13 C 0.012 3.988 14 H 0.117 0.883 15 C -0.176 4.176 16 C -0.096 4.096 17 H 0.120 0.880 18 C -0.071 4.071 19 C -0.077 4.077 20 Cl -0.048 7.048 21 C -0.141 4.141 22 C -0.135 4.135 23 C -0.133 4.133 24 C -0.129 4.129 25 C -0.160 4.160 26 N -0.172 5.172 27 C -0.004 4.004 28 C -0.133 4.133 29 H 0.246 0.754 30 H 0.125 0.875 31 H -0.213 1.213 32 H -0.230 1.230 33 H 0.167 0.833 34 H 0.168 0.832 35 H 0.175 0.825 36 H 0.245 0.755 37 H 0.126 0.874 38 H 0.085 0.915 39 H 0.156 0.844 40 H 0.166 0.834 41 H 0.167 0.833 42 H 0.167 0.833 43 H 0.102 0.898 44 H 0.129 0.871 45 H 0.270 0.730 46 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges -0.550 -1.678 0.779 1.930 hybrid contribution -0.569 -1.060 -1.104 1.633 sum -1.119 -2.739 -0.325 2.976 Atomic orbital electron populations 1.86470 1.17148 1.82186 1.50539 1.25183 0.85299 1.10840 0.96896 0.93592 0.77952 0.75360 0.84691 1.20168 0.98541 0.93520 0.96849 1.20691 1.00981 1.00348 0.94393 1.20657 0.97504 0.91650 0.97686 1.18446 1.04332 0.95211 0.95902 1.21116 1.02403 0.90480 1.00147 1.19974 1.05389 0.95606 0.89163 1.17253 0.78242 0.82359 0.84425 1.90857 1.43882 1.85350 1.23205 1.45467 1.56728 1.08003 1.24614 1.21925 0.99288 0.83179 0.94418 0.88250 1.23565 0.96781 0.99798 0.97454 1.21696 0.96175 0.92417 0.99307 0.88001 1.19686 0.95623 0.96882 0.94896 1.21043 1.00021 0.94477 0.92171 1.98359 1.90245 1.72387 1.43796 1.21295 1.00597 0.92991 0.99176 1.21448 0.97478 1.00660 0.93927 1.21607 0.95856 0.96008 0.99854 1.21272 1.00465 0.94418 0.96710 1.23387 0.94159 0.96956 1.01483 1.41805 1.48540 1.09211 1.17655 1.18456 1.00847 0.84400 0.96683 1.19995 1.02994 0.94303 0.95985 0.75420 0.87479 1.21273 1.23021 0.83321 0.83224 0.82461 0.75476 0.87403 0.91450 0.84428 0.83358 0.83305 0.83269 0.89800 0.87137 0.73020 0.84995 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 0.36 12.82 -148.98 -1.91 -1.55 16 2 C -0.07 0.10 2.79 71.23 0.20 0.30 16 3 Si 0.78 -2.15 29.76 68.60 2.04 -0.11 16 4 C -0.09 0.04 5.36 -19.83 -0.11 -0.07 16 5 C -0.15 0.26 8.59 22.02 0.19 0.45 16 6 C -0.06 0.00 10.06 22.30 0.22 0.23 16 7 C -0.13 -0.47 6.16 -21.36 -0.13 -0.60 16 8 C -0.11 -0.54 10.53 22.55 0.24 -0.30 16 9 C 0.01 0.03 6.97 39.91 0.28 0.30 16 10 C 0.59 2.67 7.80 86.56 0.68 3.35 16 11 O -0.56 -6.74 16.44 -4.17 -0.07 -6.81 16 12 N -0.70 1.39 5.26 -443.64 -2.33 -0.94 16 13 C 0.12 -0.28 4.32 45.52 0.20 -0.08 16 14 H 0.10 0.07 7.46 -2.39 -0.02 0.05 16 15 C -0.14 0.43 7.25 31.12 0.23 0.65 16 16 C -0.08 0.28 3.64 -11.01 -0.04 0.24 16 17 H 0.10 -0.33 6.57 -2.39 -0.02 -0.34 16 18 C -0.07 0.08 5.29 -19.84 -0.10 -0.03 16 19 C -0.05 -0.06 6.31 22.32 0.14 0.08 16 20 Cl -0.08 -0.10 27.16 -2.72 -0.07 -0.18 16 21 C -0.12 0.01 9.83 22.29 0.22 0.23 16 22 C -0.12 0.29 10.04 22.26 0.22 0.52 16 23 C -0.12 0.41 10.05 22.27 0.22 0.64 16 24 C -0.11 0.36 8.60 22.27 0.19 0.55 16 25 C -0.12 0.65 7.29 31.12 0.23 0.88 16 26 N -0.57 0.55 6.07 -177.18 -1.08 -0.53 16 27 C 0.11 0.23 7.25 39.13 0.28 0.51 16 28 C -0.11 -0.09 9.68 22.37 0.22 0.12 16 29 H 0.40 -3.35 8.70 -74.06 -0.64 -4.00 16 30 H 0.11 -0.04 7.96 -2.39 -0.02 -0.06 16 31 H -0.29 -0.61 7.11 99.48 0.71 0.10 16 32 H -0.30 -1.51 7.11 99.48 0.71 -0.80 16 33 H 0.15 -0.96 4.85 -2.91 -0.01 -0.98 16 34 H 0.15 -0.65 8.06 -2.91 -0.02 -0.67 16 35 H 0.16 0.62 8.06 -2.91 -0.02 0.60 16 36 H 0.41 -2.89 7.76 -92.71 -0.72 -3.61 16 37 H 0.11 -0.53 6.32 -2.39 -0.02 -0.55 16 38 H 0.07 -0.05 8.14 -2.39 -0.02 -0.07 16 39 H 0.14 -0.27 8.06 -2.91 -0.02 -0.29 16 40 H 0.15 -0.96 8.06 -2.91 -0.02 -0.98 16 41 H 0.15 -1.16 8.06 -2.91 -0.02 -1.18 16 42 H 0.15 -1.06 6.67 -2.91 -0.02 -1.08 16 43 H 0.08 -0.51 8.14 -2.39 -0.02 -0.53 16 44 H 0.11 -0.73 7.72 -2.39 -0.02 -0.75 16 45 H 0.43 -3.05 8.12 -92.71 -0.75 -3.80 16 46 H 0.13 -0.12 8.06 -2.92 -0.02 -0.15 16 Total: 0.00 -20.38 396.31 -0.85 -21.24 By element: Atomic # 1 Polarization: -18.09 SS G_CDS: -1.00 Total: -19.09 kcal Atomic # 6 Polarization: 4.40 SS G_CDS: 3.57 Total: 7.97 kcal Atomic # 7 Polarization: 1.94 SS G_CDS: -3.41 Total: -1.47 kcal Atomic # 8 Polarization: -6.38 SS G_CDS: -1.98 Total: -8.36 kcal Atomic # 14 Polarization: -2.15 SS G_CDS: 2.04 Total: -0.11 kcal Atomic # 17 Polarization: -0.10 SS G_CDS: -0.07 Total: -0.18 kcal Total: -20.38 -0.85 -21.24 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10565092_13158378.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 67.966 kcal (2) G-P(sol) polarization free energy of solvation -20.384 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 47.582 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.853 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.237 kcal (6) G-S(sol) free energy of system = (1) + (5) 46.729 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.42 seconds