Wall clock time and date at job start Sat Mar 6 2021 13:14:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86296 * 109.47209 * 2 1 4 4 C 1.50705 * 109.46918 * 119.99665 * 2 1 3 5 5 C 1.34707 * 125.66471 * 64.99956 * 4 2 1 6 6 C 1.40969 * 107.02599 * 180.02562 * 5 4 2 7 7 C 1.35932 * 106.74459 * 359.97438 * 6 5 4 8 8 C 1.47819 * 125.92933 * 179.97438 * 7 6 5 9 9 C 1.39174 * 120.00070 * 179.97438 * 8 7 6 10 10 C 1.39463 * 119.76071 * 180.02562 * 9 8 7 11 11 C 1.47562 * 120.12505 * 179.97438 * 10 9 8 12 12 O 1.21583 * 120.00414 * 180.02562 * 11 10 9 13 13 N 1.34781 * 119.99493 * 0.02562 * 11 10 9 14 14 C 1.46502 * 119.99414 * 179.97438 * 13 11 10 15 15 H 1.09001 * 112.85323 * 334.66872 * 14 13 11 16 16 C 1.53781 * 113.61338 * 105.86590 * 14 13 11 17 17 C 1.54047 * 86.98752 * 89.15854 * 16 14 13 18 18 H 1.08996 * 113.61446 * 270.88495 * 17 16 14 19 19 C 1.50700 * 113.69623 * 139.98960 * 17 16 14 20 20 C 1.38338 * 120.00558 * 142.19371 * 19 17 16 21 21 Cl 1.73596 * 120.01243 * 359.97438 * 20 19 17 22 22 C 1.38376 * 119.96720 * 179.70190 * 20 19 17 23 23 C 1.38188 * 119.99115 * 0.59754 * 22 20 19 24 24 C 1.38265 * 120.01102 * 359.69805 * 23 22 20 25 25 C 1.38219 * 120.02802 * 359.97438 * 24 23 22 26 26 C 1.53776 * 87.07742 * 25.43038 * 17 16 14 27 27 C 1.40206 * 119.75435 * 0.02562 * 10 9 8 28 28 O 1.35646 * 120.00327 * 180.25834 * 27 10 9 29 29 C 1.38825 * 119.99696 * 359.97189 * 27 10 9 30 30 C 1.37765 * 120.24170 * 0.02920 * 29 27 10 31 31 O 1.34341 * 125.66277 * 245.32656 * 4 2 1 32 32 H 0.96706 * 113.99919 * 300.00596 * 1 2 3 33 33 H 1.08996 * 109.47225 * 239.99728 * 2 1 3 34 34 H 1.48496 * 110.00489 * 178.68144 * 3 2 1 35 35 H 1.48500 * 109.99797 * 299.99988 * 3 2 1 36 36 H 1.08003 * 126.48369 * 0.02562 * 5 4 2 37 37 H 1.08003 * 126.62490 * 180.02562 * 6 5 4 38 38 H 1.08001 * 120.12047 * 0.04841 * 9 8 7 39 39 H 0.96991 * 120.00571 * 359.97438 * 13 11 10 40 40 H 1.08999 * 113.61709 * 203.66315 * 16 14 13 41 41 H 1.09008 * 113.61393 * 334.56548 * 16 14 13 42 42 H 1.08008 * 120.00077 * 180.27269 * 22 20 19 43 43 H 1.08002 * 119.99418 * 179.72757 * 23 22 20 44 44 H 1.07998 * 119.98414 * 180.02562 * 24 23 22 45 45 H 1.08000 * 119.99327 * 180.02562 * 25 24 23 46 46 H 1.08999 * 113.61772 * 220.02344 * 26 17 16 47 47 H 1.08998 * 113.68865 * 89.12727 * 26 17 16 48 48 H 0.96706 * 113.99554 * 269.71781 * 28 27 10 49 49 H 1.08006 * 119.87730 * 180.02562 * 29 27 10 50 50 H 1.08004 * 119.87402 * 179.97438 * 30 29 27 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2306 5 6 1.7570 -2.0167 1.5095 6 6 2.3812 -2.2608 2.7496 7 6 2.9078 -1.0776 3.1627 8 6 3.6573 -0.8525 4.4167 9 6 4.1443 0.4159 4.7181 10 6 4.8513 0.6226 5.9024 11 6 5.3718 1.9640 6.2297 12 8 5.9882 2.1417 7.2625 13 7 5.1638 2.9924 5.3837 14 6 5.6800 4.3243 5.7089 15 1 5.8084 4.4785 6.7803 16 6 6.9083 4.7290 4.8768 17 6 5.9189 5.3057 3.8465 18 1 5.6001 4.5830 3.0953 19 6 6.3632 6.6151 3.2473 20 6 6.1274 6.8793 1.9100 21 17 5.3205 5.7024 0.9214 22 6 6.5302 8.0845 1.3621 23 6 7.1785 9.0182 2.1478 24 6 7.4192 8.7510 3.4829 25 6 7.0112 7.5502 4.0325 26 6 4.9244 5.4658 5.0083 27 6 5.0666 -0.4491 6.7803 28 8 5.7490 -0.2527 7.9360 29 6 4.5762 -1.7102 6.4696 30 6 3.8779 -1.9142 5.2997 31 8 2.6219 -0.1447 2.2344 32 1 -0.3933 0.4418 0.7650 33 1 1.7923 -0.5139 -0.8899 34 1 3.5346 1.7703 0.0321 35 1 1.5615 2.4678 -1.2085 36 1 1.2373 -2.7400 0.8986 37 1 2.4320 -3.2056 3.2705 38 1 3.9751 1.2373 4.0376 39 1 4.6724 2.8507 4.5596 40 1 7.5303 5.4853 5.3556 41 1 7.4828 3.8804 4.5051 42 1 6.3425 8.2931 0.3191 43 1 7.4968 9.9570 1.7192 44 1 7.9256 9.4812 4.0967 45 1 7.1991 7.3422 5.0755 46 1 3.8982 5.2118 4.7429 47 1 5.0037 6.4229 5.5239 48 1 6.7033 -0.3878 7.8571 49 1 4.7429 -2.5343 7.1475 50 1 3.4994 -2.8978 5.0637 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10565092_13259648.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:14:18 Heat of formation + Delta-G solvation = -5.595836 kcal Electronic energy + Delta-G solvation = -37872.752938 eV Core-core repulsion = 32825.570694 eV Total energy + Delta-G solvation = -5047.182244 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 426.111 amu Computer time = 1.66 seconds Orbital eigenvalues (eV) -43.71175 -41.86654 -41.04804 -39.83501 -38.66958 -38.10281 -37.77758 -37.44451 -34.81434 -34.16812 -32.80435 -32.53464 -31.68064 -31.44476 -30.04343 -26.74531 -26.55101 -26.40161 -25.20263 -23.83823 -23.53176 -23.01078 -22.55262 -21.88378 -21.22978 -20.26807 -19.55783 -19.16866 -18.49074 -18.13862 -17.68350 -17.47331 -17.12522 -16.81841 -16.64387 -16.51858 -16.29033 -16.18400 -15.94543 -15.74547 -15.46689 -15.12039 -14.95337 -14.79245 -14.72221 -14.49208 -14.38468 -14.29658 -13.96882 -13.89666 -13.65126 -13.45550 -13.34719 -13.21821 -13.12499 -12.96843 -12.78849 -12.70864 -12.50621 -12.28241 -12.17245 -11.90086 -11.77786 -11.54382 -11.26501 -11.06869 -10.93356 -10.68431 -10.48120 -10.32371 -10.08087 -9.84497 -9.59814 -8.91572 -5.10296 -0.56476 -0.21687 0.16860 0.27788 0.76283 1.10298 1.15236 1.40004 1.48442 1.71910 1.84749 1.85973 1.97619 2.61238 2.62810 3.10638 3.22885 3.37018 3.38535 3.49089 3.58212 3.64068 3.67764 3.84996 3.88851 3.93702 4.00578 4.05534 4.09371 4.15679 4.20216 4.29639 4.37956 4.38846 4.39614 4.60377 4.64114 4.66565 4.71001 4.74794 4.77382 4.82674 4.87781 4.88837 4.96862 5.00027 5.01556 5.10302 5.14587 5.20241 5.28922 5.40520 5.43376 5.48436 5.50524 5.58000 5.85732 5.98089 6.39257 6.59271 6.72514 7.10127 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.541 6.541 2 C -0.023 4.023 3 Si 0.762 3.238 4 C -0.057 4.057 5 C -0.182 4.182 6 C -0.190 4.190 7 C 0.024 3.976 8 C -0.042 4.042 9 C -0.052 4.052 10 C -0.179 4.179 11 C 0.561 3.439 12 O -0.555 6.555 13 N -0.701 5.701 14 C 0.119 3.881 15 H 0.094 0.906 16 C -0.138 4.138 17 C -0.079 4.079 18 H 0.100 0.900 19 C -0.069 4.069 20 C -0.050 4.050 21 Cl -0.079 7.079 22 C -0.121 4.121 23 C -0.117 4.117 24 C -0.115 4.115 25 C -0.110 4.110 26 C -0.122 4.122 27 C 0.165 3.835 28 O -0.494 6.494 29 C -0.146 4.146 30 C -0.045 4.045 31 O -0.172 6.172 32 H 0.399 0.601 33 H 0.136 0.864 34 H -0.288 1.288 35 H -0.280 1.280 36 H 0.162 0.838 37 H 0.175 0.825 38 H 0.147 0.853 39 H 0.409 0.591 40 H 0.106 0.894 41 H 0.064 0.936 42 H 0.138 0.862 43 H 0.149 0.851 44 H 0.149 0.851 45 H 0.149 0.851 46 H 0.086 0.914 47 H 0.110 0.890 48 H 0.410 0.590 49 H 0.165 0.835 50 H 0.165 0.835 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.598 0.610 -0.439 0.960 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.349 6.349 2 C -0.134 4.134 3 Si 0.667 3.333 4 C -0.107 4.107 5 C -0.201 4.201 6 C -0.208 4.208 7 C -0.026 4.026 8 C -0.042 4.042 9 C -0.071 4.071 10 C -0.183 4.183 11 C 0.349 3.651 12 O -0.434 6.434 13 N -0.353 5.353 14 C 0.013 3.987 15 H 0.112 0.888 16 C -0.176 4.176 17 C -0.097 4.097 18 H 0.119 0.881 19 C -0.070 4.070 20 C -0.076 4.076 21 Cl -0.051 7.051 22 C -0.140 4.140 23 C -0.135 4.135 24 C -0.133 4.133 25 C -0.128 4.128 26 C -0.159 4.159 27 C 0.119 3.881 28 O -0.307 6.307 29 C -0.164 4.164 30 C -0.063 4.063 31 O -0.070 6.070 32 H 0.250 0.750 33 H 0.153 0.847 34 H -0.214 1.214 35 H -0.206 1.206 36 H 0.179 0.821 37 H 0.193 0.807 38 H 0.165 0.835 39 H 0.247 0.753 40 H 0.124 0.876 41 H 0.083 0.917 42 H 0.156 0.844 43 H 0.167 0.833 44 H 0.167 0.833 45 H 0.167 0.833 46 H 0.105 0.895 47 H 0.128 0.872 48 H 0.271 0.729 49 H 0.182 0.818 50 H 0.183 0.817 Dipole moment (debyes) X Y Z Total from point charges -0.131 1.367 -0.511 1.466 hybrid contribution 0.321 -1.001 -1.086 1.511 sum 0.191 0.366 -1.597 1.649 Atomic orbital electron populations 1.86535 1.15957 1.82086 1.50340 1.24387 0.85392 1.10807 0.92794 0.93553 0.78475 0.75804 0.85517 1.23080 1.01216 0.94145 0.92261 1.21796 1.03991 0.95917 0.98367 1.22153 1.02089 0.99132 0.97458 1.20453 1.03449 0.87690 0.90989 1.17695 1.00461 0.94496 0.91551 1.21396 0.93885 0.97237 0.94534 1.20242 1.06529 0.94238 0.97249 1.18218 0.79181 0.84612 0.83076 1.90805 1.41876 1.84617 1.26066 1.45555 1.57306 1.08271 1.24177 1.21852 0.95236 0.81572 1.00011 0.88784 1.23601 0.96483 1.01141 0.96386 1.21737 0.97812 0.93666 0.96485 0.88143 1.19691 0.98811 0.97028 0.91425 1.21033 1.02060 0.92382 0.92156 1.98361 1.78479 1.58342 1.69880 1.21288 0.99020 0.92320 1.01378 1.21442 0.98008 0.99803 0.94255 1.21602 0.98766 0.97358 0.95550 1.21259 0.97608 0.93110 1.00848 1.23373 0.98891 0.98732 0.94954 1.18877 0.93505 0.91424 0.84335 1.84710 1.25194 1.92350 1.28462 1.21581 1.00330 0.96511 0.98019 1.21418 0.94243 0.99233 0.91358 1.83898 1.58279 1.38096 1.26700 0.75013 0.84682 1.21417 1.20640 0.82083 0.80746 0.83541 0.75315 0.87587 0.91703 0.84442 0.83329 0.83289 0.83340 0.89503 0.87201 0.72889 0.81793 0.81733 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.94 12.88 -148.98 -1.92 -0.98 16 2 C -0.02 0.04 2.98 71.24 0.21 0.25 16 3 Si 0.76 -1.03 32.11 68.60 2.20 1.17 16 4 C -0.06 -0.02 6.20 24.88 0.15 0.13 16 5 C -0.18 -0.04 10.78 22.13 0.24 0.20 16 6 C -0.19 0.20 10.26 22.40 0.23 0.43 16 7 C 0.02 0.01 7.03 24.27 0.17 0.18 16 8 C -0.04 0.03 5.87 -20.13 -0.12 -0.09 16 9 C -0.05 0.02 9.20 22.79 0.21 0.23 16 10 C -0.18 -0.55 5.88 -20.04 -0.12 -0.67 16 11 C 0.56 3.36 7.76 86.70 0.67 4.03 16 12 O -0.55 -7.25 14.76 17.01 0.25 -7.00 16 13 N -0.70 -0.19 5.21 -443.17 -2.31 -2.50 16 14 C 0.12 -0.07 4.30 45.52 0.20 0.13 16 15 H 0.09 0.26 7.50 -2.39 -0.02 0.24 16 16 C -0.14 0.21 7.27 31.21 0.23 0.43 16 17 C -0.08 0.16 3.65 -10.92 -0.04 0.12 16 18 H 0.10 -0.12 6.57 -2.39 -0.02 -0.13 16 19 C -0.07 0.00 5.29 -19.84 -0.11 -0.10 16 20 C -0.05 -0.10 6.31 22.33 0.14 0.04 16 21 Cl -0.08 -0.23 27.15 -2.72 -0.07 -0.30 16 22 C -0.12 -0.07 9.83 22.29 0.22 0.15 16 23 C -0.12 0.23 10.05 22.26 0.22 0.45 16 24 C -0.11 0.34 10.05 22.27 0.22 0.57 16 25 C -0.11 0.26 8.62 22.26 0.19 0.46 16 26 C -0.12 0.49 7.28 31.12 0.23 0.71 16 27 C 0.17 0.46 6.72 22.89 0.15 0.61 16 28 O -0.49 -2.40 11.55 -68.61 -0.79 -3.19 16 29 C -0.15 0.34 9.96 22.30 0.22 0.56 16 30 C -0.04 0.17 9.54 22.55 0.22 0.38 16 31 O -0.17 -0.20 8.80 -6.55 -0.06 -0.25 16 32 H 0.40 -3.72 8.70 -74.05 -0.64 -4.36 16 33 H 0.14 -0.31 7.96 -2.39 -0.02 -0.32 16 34 H -0.29 -1.38 7.11 99.48 0.71 -0.68 16 35 H -0.28 -1.23 7.11 99.48 0.71 -0.52 16 36 H 0.16 -0.30 8.06 -2.91 -0.02 -0.32 16 37 H 0.18 -1.08 7.25 -2.91 -0.02 -1.11 16 38 H 0.15 -0.56 6.24 -2.91 -0.02 -0.58 16 39 H 0.41 -1.63 6.73 -92.72 -0.62 -2.25 16 40 H 0.11 -0.37 6.33 -2.39 -0.02 -0.38 16 41 H 0.06 0.07 8.14 -2.38 -0.02 0.05 16 42 H 0.14 -0.18 8.06 -2.91 -0.02 -0.20 16 43 H 0.15 -0.90 8.06 -2.91 -0.02 -0.92 16 44 H 0.15 -1.08 8.06 -2.91 -0.02 -1.11 16 45 H 0.15 -0.91 6.67 -2.91 -0.02 -0.93 16 46 H 0.09 -0.44 8.14 -2.39 -0.02 -0.46 16 47 H 0.11 -0.61 7.73 -2.39 -0.02 -0.63 16 48 H 0.41 -0.91 9.06 -74.05 -0.67 -1.58 16 49 H 0.16 -1.06 8.06 -2.91 -0.02 -1.09 16 50 H 0.17 -1.51 6.96 -2.91 -0.02 -1.53 16 Total: 0.00 -22.87 435.77 0.20 -22.67 By element: Atomic # 1 Polarization: -17.97 SS G_CDS: -0.85 Total: -18.81 kcal Atomic # 6 Polarization: 5.45 SS G_CDS: 3.75 Total: 9.20 kcal Atomic # 7 Polarization: -0.19 SS G_CDS: -2.31 Total: -2.50 kcal Atomic # 8 Polarization: -8.91 SS G_CDS: -2.52 Total: -11.43 kcal Atomic # 14 Polarization: -1.03 SS G_CDS: 2.20 Total: 1.17 kcal Atomic # 17 Polarization: -0.23 SS G_CDS: -0.07 Total: -0.30 kcal Total: -22.87 0.20 -22.67 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10565092_13259648.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 17.076 kcal (2) G-P(sol) polarization free energy of solvation -22.873 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -5.797 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.202 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.672 kcal (6) G-S(sol) free energy of system = (1) + (5) -5.596 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.66 seconds