Wall clock time and date at job start Sat Mar 6 2021 13:14:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46501 * 1 3 3 C 1.34649 * 124.85053 * 2 1 4 4 C 1.36765 * 108.39978 * 180.02562 * 3 2 1 5 5 C 1.47267 * 126.94521 * 180.02562 * 4 3 2 6 6 O 1.21633 * 119.99968 * 179.97438 * 5 4 3 7 7 N 1.34773 * 120.00227 * 359.97438 * 5 4 3 8 8 C 1.46495 * 120.00274 * 179.97438 * 7 5 4 9 9 H 1.08997 * 112.85356 * 336.19853 * 8 7 5 10 10 C 1.53781 * 113.61331 * 107.50693 * 8 7 5 11 11 C 1.53778 * 87.08343 * 89.11575 * 10 8 7 12 12 H 1.09001 * 113.69122 * 270.87000 * 11 10 8 13 13 C 1.50698 * 113.61381 * 139.98391 * 11 10 8 14 14 C 1.38332 * 120.00695 * 142.50664 * 13 11 10 15 15 Cl 1.73597 * 120.01263 * 359.94731 * 14 13 11 16 16 C 1.38378 * 119.96937 * 179.97438 * 14 13 11 17 17 C 1.38188 * 119.99226 * 359.97438 * 16 14 13 18 18 C 1.38271 * 120.01007 * 0.02562 * 17 16 14 19 19 C 1.38213 * 120.02539 * 359.74257 * 18 17 16 20 20 C 1.53780 * 87.08110 * 25.43170 * 11 10 8 21 21 C 1.46693 * 106.11477 * 359.76614 * 4 3 2 22 22 C 1.34486 * 106.32945 * 0.38952 * 21 4 3 23 23 C 1.50697 * 125.56987 * 179.86427 * 22 21 4 24 24 O 1.42905 * 109.46996 * 209.69379 * 23 22 21 25 25 Si 1.86301 * 109.47403 * 329.69642 * 23 22 21 26 26 H 1.08996 * 109.46957 * 269.99161 * 1 2 3 27 27 H 1.08999 * 109.47266 * 29.99808 * 1 2 3 28 28 H 1.09003 * 109.46935 * 150.00231 * 1 2 3 29 29 H 1.08008 * 125.80221 * 0.04168 * 3 2 1 30 30 H 0.97005 * 119.99896 * 0.02562 * 7 5 4 31 31 H 1.09004 * 113.61307 * 203.66667 * 10 8 7 32 32 H 1.09000 * 113.61414 * 334.56482 * 10 8 7 33 33 H 1.07998 * 120.00116 * 179.97438 * 16 14 13 34 34 H 1.07994 * 119.99447 * 179.97438 * 17 16 14 35 35 H 1.07992 * 119.98147 * 180.02562 * 18 17 16 36 36 H 1.08002 * 119.99286 * 180.27476 * 19 18 17 37 37 H 1.08994 * 113.61490 * 220.01951 * 20 11 10 38 38 H 1.09005 * 113.61224 * 89.11681 * 20 11 10 39 39 H 1.07996 * 126.83517 * 180.24948 * 21 4 3 40 40 H 1.09001 * 109.46613 * 89.69790 * 23 22 21 41 41 H 0.96696 * 114.00036 * 60.00342 * 24 23 22 42 42 H 1.48497 * 109.99842 * 179.97438 * 25 23 22 43 43 H 1.48498 * 109.99736 * 301.31722 * 25 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2344 1.1050 0.0000 4 6 3.5461 0.7177 -0.0006 5 6 4.7283 1.5958 -0.0003 6 8 5.8447 1.1128 -0.0004 7 7 4.5734 2.9346 0.0002 8 6 5.7494 3.8081 0.0011 9 1 6.6370 3.3227 0.4066 10 6 5.9918 4.5162 -1.3424 11 6 5.0869 5.6450 -0.8211 12 1 4.0304 5.4986 -1.0460 13 6 5.5756 7.0247 -1.1795 14 6 4.6690 8.0152 -1.5118 15 17 2.9679 7.6689 -1.5174 16 6 5.1186 9.2820 -1.8402 17 6 6.4728 9.5571 -1.8356 18 6 7.3786 8.5666 -1.5034 19 6 6.9298 7.3024 -1.1706 20 6 5.4822 5.2004 0.5970 21 6 3.5375 -0.7492 0.0048 22 6 2.2447 -1.1198 -0.0006 23 6 1.7398 -2.5397 -0.0010 24 8 0.4806 -2.5973 -0.6741 25 14 2.9646 -3.6342 -0.8800 26 1 -0.3633 -0.0002 1.0276 27 1 -0.3634 0.8900 -0.5138 28 1 -0.3633 -0.8900 -0.5138 29 1 1.8766 2.1241 0.0006 30 1 3.6831 3.3198 0.0006 31 1 7.0271 4.8215 -1.4944 32 1 5.5765 3.9835 -2.1979 33 1 4.4112 10.0556 -2.1001 34 1 6.8238 10.5456 -2.0923 35 1 8.4368 8.7822 -1.4995 36 1 7.6375 6.5304 -0.9069 37 1 4.6555 5.2200 1.3070 38 1 6.3781 5.6928 0.9751 39 1 4.3981 -1.4017 0.0096 40 1 1.6185 -2.8823 1.0267 41 1 0.5135 -2.3060 -1.5956 42 1 2.4785 -5.0373 -0.8866 43 1 3.1628 -3.1583 -2.2726 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10565092_13287730.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:14:29 Heat of formation + Delta-G solvation = 38.845889 kcal Electronic energy + Delta-G solvation = -27074.064157 eV Core-core repulsion = 23113.652085 eV Total energy + Delta-G solvation = -3960.412071 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 347.108 amu Computer time = 0.93 seconds Orbital eigenvalues (eV) -42.48052 -41.46713 -40.11554 -38.69529 -37.94478 -37.40676 -34.60047 -33.70593 -32.01196 -31.66038 -31.09357 -27.69140 -26.69930 -26.59632 -25.87825 -24.06002 -23.48656 -22.50792 -21.07717 -20.70029 -20.08945 -19.06143 -18.25467 -17.44843 -17.18272 -16.86375 -16.77613 -16.49539 -16.31042 -15.92097 -15.64810 -15.39366 -15.17839 -15.08137 -14.76190 -14.74694 -14.61033 -14.31147 -14.10583 -13.57298 -13.41560 -13.33204 -13.23564 -13.07371 -12.89392 -12.67436 -12.46881 -12.36277 -12.14047 -11.97886 -11.72668 -11.51514 -11.22625 -11.01330 -10.90323 -10.10050 -9.82674 -9.58296 -9.55224 -9.21622 -4.89338 0.18964 0.29698 0.72799 1.03064 1.17093 1.44353 1.63430 1.80729 2.05017 2.25414 2.54496 2.64243 3.15277 3.44641 3.55438 3.62279 3.71768 3.86677 3.88555 3.94581 3.98393 4.11845 4.19112 4.29133 4.40630 4.41322 4.42587 4.44839 4.51180 4.66764 4.73631 4.77526 4.77660 4.87173 4.93551 4.95892 4.98710 5.00785 5.03397 5.18534 5.30798 5.45435 5.50615 5.62265 5.69179 5.87614 5.96219 6.21762 6.31452 6.63238 7.34287 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.046 3.954 2 N -0.426 5.426 3 C 0.068 3.932 4 C -0.260 4.260 5 C 0.591 3.409 6 O -0.589 6.589 7 N -0.701 5.701 8 C 0.119 3.881 9 H 0.090 0.910 10 C -0.139 4.139 11 C -0.074 4.074 12 H 0.104 0.896 13 C -0.070 4.070 14 C -0.050 4.050 15 Cl -0.075 7.075 16 C -0.122 4.122 17 C -0.118 4.118 18 C -0.116 4.116 19 C -0.112 4.112 20 C -0.122 4.122 21 C -0.154 4.154 22 C -0.024 4.024 23 C -0.044 4.044 24 O -0.539 6.539 25 Si 0.775 3.225 26 H 0.079 0.921 27 H 0.102 0.898 28 H 0.111 0.889 29 H 0.203 0.797 30 H 0.410 0.590 31 H 0.102 0.898 32 H 0.064 0.936 33 H 0.139 0.861 34 H 0.149 0.851 35 H 0.148 0.852 36 H 0.147 0.853 37 H 0.084 0.916 38 H 0.106 0.894 39 H 0.156 0.844 40 H 0.133 0.867 41 H 0.388 0.612 42 H -0.288 1.288 43 H -0.294 1.294 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.545 3.649 0.851 4.529 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.094 4.094 2 N -0.100 5.100 3 C -0.069 4.069 4 C -0.270 4.270 5 C 0.382 3.618 6 O -0.470 6.470 7 N -0.352 5.352 8 C 0.013 3.987 9 H 0.108 0.892 10 C -0.178 4.178 11 C -0.093 4.093 12 H 0.122 0.878 13 C -0.070 4.070 14 C -0.076 4.076 15 Cl -0.046 7.046 16 C -0.140 4.140 17 C -0.136 4.136 18 C -0.134 4.134 19 C -0.130 4.130 20 C -0.159 4.159 21 C -0.178 4.178 22 C -0.133 4.133 23 C -0.154 4.154 24 O -0.347 6.347 25 Si 0.679 3.321 26 H 0.098 0.902 27 H 0.121 0.879 28 H 0.129 0.871 29 H 0.220 0.780 30 H 0.247 0.753 31 H 0.121 0.879 32 H 0.083 0.917 33 H 0.157 0.843 34 H 0.167 0.833 35 H 0.166 0.834 36 H 0.165 0.835 37 H 0.103 0.897 38 H 0.124 0.876 39 H 0.174 0.826 40 H 0.150 0.850 41 H 0.238 0.762 42 H -0.215 1.215 43 H -0.221 1.221 Dipole moment (debyes) X Y Z Total from point charges -2.368 2.484 0.768 3.517 hybrid contribution -1.388 0.760 -0.819 1.782 sum -3.757 3.244 -0.051 4.964 Atomic orbital electron populations 1.22731 0.74727 1.06980 1.04944 1.43718 1.07992 1.04637 1.53671 1.22374 0.89237 0.93125 1.02209 1.20317 0.92069 0.94039 1.20568 1.17652 0.87847 0.81978 0.74343 1.90750 1.27556 1.76037 1.52674 1.45377 1.09801 1.04772 1.75234 1.21797 0.89384 0.90199 0.97288 0.89223 1.23556 1.01005 0.95822 0.97410 1.21666 1.00542 0.89676 0.97384 0.87796 1.19719 0.93110 0.94863 0.99350 1.21032 0.84756 0.95870 1.05989 1.98354 1.13879 1.95203 1.97182 1.21295 0.97240 0.95236 1.00252 1.21442 0.92033 1.00883 0.99215 1.21595 1.01301 0.92854 0.97631 1.21263 0.94277 0.97898 0.99545 1.23364 1.03529 0.93534 0.95516 1.21822 0.95600 0.93462 1.06870 1.20828 0.90460 0.89776 1.12223 1.24754 0.92442 0.94040 1.04114 1.86535 1.29630 1.88602 1.29941 0.93292 0.84480 0.74553 0.79811 0.90246 0.87893 0.87059 0.78035 0.75300 0.87922 0.91715 0.84337 0.83345 0.83390 0.83513 0.89701 0.87584 0.82610 0.84969 0.76238 1.21489 1.22098 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 -0.34 10.71 127.77 1.37 1.03 16 2 N -0.43 0.84 3.09 -533.25 -1.65 -0.81 16 3 C 0.07 -0.14 10.83 83.92 0.91 0.77 16 4 C -0.26 -1.19 6.29 -19.04 -0.12 -1.31 16 5 C 0.59 4.67 7.81 86.62 0.68 5.35 16 6 O -0.59 -9.81 16.57 -4.14 -0.07 -9.88 16 7 N -0.70 -0.47 5.25 -443.45 -2.33 -2.80 16 8 C 0.12 0.05 4.32 45.52 0.20 0.25 16 9 H 0.09 0.40 7.46 -2.39 -0.02 0.39 16 10 C -0.14 0.10 7.25 31.12 0.23 0.32 16 11 C -0.07 0.15 3.64 -11.02 -0.04 0.11 16 12 H 0.10 -0.22 6.57 -2.39 -0.02 -0.23 16 13 C -0.07 0.00 5.29 -19.84 -0.10 -0.10 16 14 C -0.05 -0.09 6.31 22.33 0.14 0.06 16 15 Cl -0.08 -0.11 27.16 -2.72 -0.07 -0.18 16 16 C -0.12 -0.04 9.83 22.29 0.22 0.18 16 17 C -0.12 0.22 10.05 22.27 0.22 0.45 16 18 C -0.12 0.30 10.05 22.27 0.22 0.53 16 19 C -0.11 0.21 8.60 22.26 0.19 0.40 16 20 C -0.12 0.42 7.29 31.12 0.23 0.65 16 21 C -0.15 -0.70 9.50 23.62 0.22 -0.47 16 22 C -0.02 -0.02 6.13 40.98 0.25 0.23 16 23 C -0.04 0.08 2.98 71.23 0.21 0.30 16 24 O -0.54 1.18 9.95 -148.98 -1.48 -0.30 16 25 Si 0.77 -0.62 31.13 68.60 2.14 1.51 16 26 H 0.08 -0.60 8.14 -2.39 -0.02 -0.62 16 27 H 0.10 -1.18 8.13 -2.39 -0.02 -1.20 16 28 H 0.11 -0.81 4.93 -2.39 -0.01 -0.82 16 29 H 0.20 -2.01 7.45 -2.91 -0.02 -2.03 16 30 H 0.41 -2.13 7.64 -92.70 -0.71 -2.84 16 31 H 0.10 -0.24 6.32 -2.38 -0.02 -0.25 16 32 H 0.06 0.12 8.14 -2.39 -0.02 0.10 16 33 H 0.14 -0.25 8.06 -2.91 -0.02 -0.27 16 34 H 0.15 -0.89 8.06 -2.91 -0.02 -0.91 16 35 H 0.15 -1.01 8.06 -2.91 -0.02 -1.03 16 36 H 0.15 -0.78 6.68 -2.91 -0.02 -0.80 16 37 H 0.08 -0.38 8.14 -2.39 -0.02 -0.40 16 38 H 0.11 -0.49 7.71 -2.38 -0.02 -0.51 16 39 H 0.16 0.55 6.90 -2.91 -0.02 0.53 16 40 H 0.13 -0.49 7.96 -2.39 -0.02 -0.51 16 41 H 0.39 -2.67 8.38 -74.06 -0.62 -3.29 16 42 H -0.29 -1.43 7.11 99.48 0.71 -0.72 16 43 H -0.29 -1.61 7.11 99.48 0.71 -0.91 16 Total: 0.00 -21.39 369.00 1.34 -20.05 By element: Atomic # 1 Polarization: -16.10 SS G_CDS: -0.22 Total: -16.33 kcal Atomic # 6 Polarization: 3.70 SS G_CDS: 5.03 Total: 8.72 kcal Atomic # 7 Polarization: 0.37 SS G_CDS: -3.97 Total: -3.60 kcal Atomic # 8 Polarization: -8.62 SS G_CDS: -1.55 Total: -10.17 kcal Atomic # 14 Polarization: -0.62 SS G_CDS: 2.14 Total: 1.51 kcal Atomic # 17 Polarization: -0.11 SS G_CDS: -0.07 Total: -0.18 kcal Total: -21.39 1.34 -20.05 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10565092_13287730.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 58.898 kcal (2) G-P(sol) polarization free energy of solvation -21.391 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 37.508 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.338 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.052 kcal (6) G-S(sol) free energy of system = (1) + (5) 38.846 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.93 seconds