Wall clock time and date at job start Sat Mar 6 2021 13:14:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 C 1.38976 * 119.95723 * 2 1 4 4 O 1.35709 * 119.90989 * 0.02562 * 3 2 1 5 5 C 1.39013 * 120.17761 * 179.97438 * 3 2 1 6 6 C 1.50707 * 119.95686 * 180.02562 * 5 3 2 7 7 O 1.42897 * 109.47149 * 284.98056 * 6 5 3 8 8 Si 1.86293 * 109.46970 * 164.98092 * 6 5 3 9 9 C 1.37681 * 120.08885 * 0.02562 * 5 3 2 10 10 C 1.39752 * 119.90903 * 0.25400 * 9 5 3 11 11 C 1.47606 * 120.08686 * 179.74600 * 10 9 5 12 12 O 1.21579 * 119.99954 * 0.02562 * 11 10 9 13 13 N 1.34779 * 119.99850 * 179.97438 * 11 10 9 14 14 C 1.46503 * 119.99754 * 180.02562 * 13 11 10 15 15 H 1.08996 * 112.85030 * 336.19996 * 14 13 11 16 16 C 1.53778 * 113.61294 * 107.50353 * 14 13 11 17 17 C 1.53788 * 87.07796 * 89.11749 * 16 14 13 18 18 H 1.08995 * 113.61216 * 270.87980 * 17 16 14 19 19 C 1.50694 * 113.61346 * 139.98139 * 17 16 14 20 20 C 1.38330 * 120.00698 * 142.50206 * 19 17 16 21 21 Cl 1.73597 * 120.01298 * 359.97438 * 20 19 17 22 22 C 1.38376 * 119.97481 * 179.97438 * 20 19 17 23 23 C 1.38194 * 119.98796 * 0.02562 * 22 20 19 24 24 C 1.38263 * 120.01065 * 0.02562 * 23 22 20 25 25 C 1.38223 * 120.02735 * 359.70382 * 24 23 22 26 26 C 1.53778 * 87.08307 * 25.43086 * 17 16 14 27 27 C 1.37724 * 119.95551 * 180.02562 * 2 1 3 28 28 H 1.08996 * 109.47309 * 89.99882 * 1 2 3 29 29 H 1.09001 * 109.47567 * 210.00688 * 1 2 3 30 30 H 1.09006 * 109.47299 * 330.00249 * 1 2 3 31 31 H 0.96696 * 114.00641 * 269.98216 * 4 3 2 32 32 H 1.08997 * 109.46524 * 44.97815 * 6 5 3 33 33 H 0.96704 * 113.99986 * 59.99643 * 7 6 5 34 34 H 1.48503 * 109.99736 * 178.68171 * 8 6 5 35 35 H 1.48496 * 110.00341 * 299.99864 * 8 6 5 36 36 H 1.08002 * 120.04241 * 179.97438 * 9 5 3 37 37 H 0.96997 * 120.00020 * 0.02562 * 13 11 10 38 38 H 1.08995 * 113.61378 * 203.66024 * 16 14 13 39 39 H 1.09003 * 113.61682 * 334.57169 * 16 14 13 40 40 H 1.08000 * 120.00997 * 179.97438 * 22 20 19 41 41 H 1.08001 * 119.99456 * 180.02562 * 23 22 20 42 42 H 1.07998 * 119.98911 * 180.02562 * 24 23 22 43 43 H 1.07999 * 119.99207 * 180.29354 * 25 24 23 44 44 H 1.08997 * 113.61460 * 220.02082 * 26 17 16 45 45 H 1.09000 * 113.61310 * 89.11571 * 26 17 16 46 46 H 1.08005 * 120.04297 * 0.02562 * 27 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2010 1.2041 0.0000 4 8 1.5197 2.3778 0.0005 5 6 3.5911 1.2094 0.0005 6 6 4.3386 2.5180 0.0011 7 8 4.2730 3.1047 -1.3002 8 14 6.1194 2.2157 0.4569 9 6 4.2859 0.0208 0.0005 10 6 3.5918 -1.1921 -0.0054 11 6 4.3328 -2.4687 -0.0111 12 8 5.5485 -2.4659 -0.0101 13 7 3.6615 -3.6375 -0.0162 14 6 4.3970 -4.9045 -0.0213 15 1 5.4044 -4.8075 -0.4259 16 6 4.3392 -5.6556 1.3193 17 6 3.0623 -6.3333 0.7946 18 1 2.1503 -5.7813 1.0215 19 6 2.9662 -7.7952 1.1475 20 6 1.7418 -8.3483 1.4770 21 17 0.3157 -7.3585 1.4848 22 6 1.6543 -9.6909 1.8004 23 6 2.7900 -10.4783 1.7945 24 6 4.0136 -9.9247 1.4661 25 6 4.1008 -8.5849 1.1376 26 6 3.6020 -6.0758 -0.6221 27 6 2.1947 -1.1933 -0.0005 28 1 -0.3634 0.0000 -1.0276 29 1 -0.3634 -0.8899 0.5139 30 1 -0.3634 0.8900 0.5138 31 1 1.3221 2.7184 -0.8826 32 1 3.8873 3.1938 0.7275 33 1 3.3735 3.2899 -1.6033 34 1 6.8746 3.4941 0.4300 35 1 6.2014 1.6057 1.8083 36 1 5.3659 0.0258 0.0005 37 1 2.6916 -3.6397 -0.0166 38 1 5.1695 -6.3456 1.4693 39 1 4.1675 -5.0054 2.1771 40 1 0.6987 -10.1233 2.0581 41 1 2.7217 -11.5263 2.0465 42 1 4.9008 -10.5404 1.4613 43 1 5.0561 -8.1541 0.8766 44 1 2.8352 -5.7647 -1.3316 45 1 4.2308 -6.8806 -1.0028 46 1 1.6546 -2.1286 -0.0014 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10565092_13287732.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:14:32 Heat of formation + Delta-G solvation = -38.015545 kcal Electronic energy + Delta-G solvation = -30781.464435 eV Core-core repulsion = 26436.236980 eV Total energy + Delta-G solvation = -4345.227455 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.112 amu Computer time = 1.26 seconds Orbital eigenvalues (eV) -41.94477 -41.30311 -40.29099 -38.88821 -37.76672 -37.60250 -37.40501 -34.82145 -33.99044 -32.27413 -31.65991 -31.26609 -28.03373 -26.99396 -26.72068 -26.38131 -24.81737 -23.65409 -22.64289 -22.18004 -21.62585 -20.19615 -19.51654 -18.97907 -18.28897 -18.02331 -17.69022 -16.96028 -16.78470 -16.49773 -16.34683 -16.13935 -16.06417 -15.51611 -15.20908 -15.13187 -14.79384 -14.76462 -14.66948 -14.37570 -14.32641 -14.16471 -13.81177 -13.55734 -13.38781 -13.35148 -12.96081 -12.94713 -12.77901 -12.67817 -12.46917 -12.34417 -12.15944 -12.14908 -11.76044 -11.52847 -11.38610 -11.26501 -11.21052 -11.05416 -10.21990 -9.98029 -9.82997 -9.69781 -9.57344 -4.96802 -0.45179 0.04764 0.18922 0.29589 1.17328 1.26280 1.49250 1.60500 1.81082 1.97213 2.51816 2.63906 3.03552 3.36264 3.41946 3.51604 3.59752 3.61205 3.69189 3.78238 3.86828 3.96320 3.98041 4.07023 4.11469 4.18140 4.30425 4.36172 4.40410 4.40896 4.58234 4.64608 4.67214 4.73199 4.77005 4.78391 4.83604 4.90764 4.98960 4.99441 5.02257 5.06671 5.13435 5.17160 5.26853 5.30626 5.41438 5.50226 5.54929 5.60226 5.87494 6.40381 6.50784 6.69967 7.08379 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.112 4.112 2 C -0.117 4.117 3 C 0.146 3.854 4 O -0.498 6.498 5 C -0.154 4.154 6 C -0.067 4.067 7 O -0.541 6.541 8 Si 0.780 3.220 9 C -0.056 4.056 10 C -0.148 4.148 11 C 0.562 3.438 12 O -0.569 6.569 13 N -0.696 5.696 14 C 0.117 3.883 15 H 0.096 0.904 16 C -0.140 4.140 17 C -0.077 4.077 18 H 0.104 0.896 19 C -0.069 4.069 20 C -0.050 4.050 21 Cl -0.075 7.075 22 C -0.122 4.122 23 C -0.118 4.118 24 C -0.116 4.116 25 C -0.111 4.111 26 C -0.121 4.121 27 C -0.059 4.059 28 H 0.088 0.912 29 H 0.082 0.918 30 H 0.071 0.929 31 H 0.414 0.586 32 H 0.081 0.919 33 H 0.377 0.623 34 H -0.284 1.284 35 H -0.278 1.278 36 H 0.139 0.861 37 H 0.413 0.587 38 H 0.105 0.895 39 H 0.065 0.935 40 H 0.138 0.862 41 H 0.148 0.852 42 H 0.148 0.852 43 H 0.148 0.852 44 H 0.086 0.914 45 H 0.108 0.892 46 H 0.160 0.840 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.649 -4.226 -2.776 6.868 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.168 4.168 2 C -0.117 4.117 3 C 0.101 3.899 4 O -0.312 6.312 5 C -0.154 4.154 6 C -0.177 4.177 7 O -0.348 6.348 8 Si 0.683 3.317 9 C -0.075 4.075 10 C -0.151 4.151 11 C 0.351 3.649 12 O -0.449 6.449 13 N -0.347 5.347 14 C 0.011 3.989 15 H 0.114 0.886 16 C -0.178 4.178 17 C -0.095 4.095 18 H 0.122 0.878 19 C -0.070 4.070 20 C -0.077 4.077 21 Cl -0.046 7.046 22 C -0.141 4.141 23 C -0.136 4.136 24 C -0.134 4.134 25 C -0.129 4.129 26 C -0.159 4.159 27 C -0.077 4.077 28 H 0.106 0.894 29 H 0.100 0.900 30 H 0.090 0.910 31 H 0.275 0.725 32 H 0.098 0.902 33 H 0.226 0.774 34 H -0.211 1.211 35 H -0.204 1.204 36 H 0.157 0.843 37 H 0.251 0.749 38 H 0.123 0.877 39 H 0.084 0.916 40 H 0.156 0.844 41 H 0.166 0.834 42 H 0.166 0.834 43 H 0.166 0.834 44 H 0.105 0.895 45 H 0.126 0.874 46 H 0.178 0.822 Dipole moment (debyes) X Y Z Total from point charges -2.633 -4.071 -1.593 5.103 hybrid contribution -2.076 0.863 0.160 2.254 sum -4.710 -3.208 -1.433 5.876 Atomic orbital electron populations 1.20772 0.88162 1.04095 1.03816 1.20421 0.98330 0.91691 1.01295 1.18398 0.88412 0.86075 0.97060 1.84696 1.75540 1.35390 1.35562 1.20559 0.94090 0.95881 1.04919 1.25183 1.12318 0.91532 0.88637 1.86783 1.33625 1.82880 1.31472 0.92103 0.75062 0.82335 0.82201 1.21003 1.00114 0.90773 0.95595 1.19828 0.94335 0.92692 1.08249 1.18307 0.86843 0.84324 0.75431 1.90789 1.14905 1.87969 1.51215 1.45481 1.10716 1.04382 1.74136 1.21886 0.97078 0.82382 0.97512 0.88552 1.23571 0.97867 0.99076 0.97326 1.21698 0.99385 0.90928 0.97523 0.87787 1.19704 0.91542 0.96378 0.99400 1.21037 0.88028 0.92615 1.05977 1.98357 1.38796 1.70266 1.97173 1.21296 1.00623 0.91868 1.00268 1.21441 0.91925 1.01016 0.99216 1.21597 0.98720 0.95446 0.97653 1.21265 0.98325 0.93820 0.99517 1.23371 0.99900 0.97129 0.95492 1.21370 0.91724 0.99087 0.95530 0.89369 0.89962 0.91015 0.72457 0.90173 0.77402 1.21117 1.20356 0.84339 0.74926 0.87711 0.91602 0.84394 0.83416 0.83416 0.83397 0.89516 0.87370 0.82233 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.76 9.78 71.24 0.70 1.45 16 2 C -0.12 0.31 5.89 -19.81 -0.12 0.19 16 3 C 0.15 -0.08 6.62 22.63 0.15 0.07 16 4 O -0.50 1.89 11.52 -90.30 -1.04 0.85 16 5 C -0.15 -0.37 5.27 -19.81 -0.10 -0.47 16 6 C -0.07 -0.18 2.33 71.24 0.17 -0.01 16 7 O -0.54 -0.70 12.65 -148.98 -1.89 -2.58 16 8 Si 0.78 3.75 30.17 68.60 2.07 5.82 16 9 C -0.06 -0.25 8.20 22.50 0.18 -0.06 16 10 C -0.15 -0.35 5.87 -20.08 -0.12 -0.47 16 11 C 0.56 2.62 7.76 86.72 0.67 3.29 16 12 O -0.57 -7.04 15.94 -3.97 -0.06 -7.10 16 13 N -0.70 1.26 5.21 -443.13 -2.31 -1.05 16 14 C 0.12 -0.24 4.32 45.52 0.20 -0.04 16 15 H 0.10 0.13 7.46 -2.39 -0.02 0.11 16 16 C -0.14 0.36 7.25 31.12 0.23 0.58 16 17 C -0.08 0.27 3.64 -11.01 -0.04 0.23 16 18 H 0.10 -0.36 6.58 -2.39 -0.02 -0.37 16 19 C -0.07 0.07 5.29 -19.84 -0.10 -0.03 16 20 C -0.05 -0.05 6.31 22.32 0.14 0.09 16 21 Cl -0.07 -0.06 27.16 -2.72 -0.07 -0.14 16 22 C -0.12 0.02 9.83 22.29 0.22 0.24 16 23 C -0.12 0.28 10.05 22.27 0.22 0.51 16 24 C -0.12 0.39 10.05 22.27 0.22 0.61 16 25 C -0.11 0.33 8.60 22.27 0.19 0.52 16 26 C -0.12 0.65 7.29 31.12 0.23 0.88 16 27 C -0.06 0.18 9.18 22.50 0.21 0.38 16 28 H 0.09 -0.81 8.14 -2.39 -0.02 -0.83 16 29 H 0.08 -0.70 8.08 -2.39 -0.02 -0.72 16 30 H 0.07 -0.36 7.52 -2.38 -0.02 -0.38 16 31 H 0.41 -5.56 8.56 -74.06 -0.63 -6.20 16 32 H 0.08 0.21 7.82 -2.39 -0.02 0.19 16 33 H 0.38 -2.58 8.20 -74.05 -0.61 -3.19 16 34 H -0.28 -2.84 7.11 99.48 0.71 -2.14 16 35 H -0.28 -2.55 7.11 99.48 0.71 -1.84 16 36 H 0.14 0.71 4.70 -2.91 -0.01 0.69 16 37 H 0.41 -2.98 6.72 -92.71 -0.62 -3.60 16 38 H 0.10 -0.43 6.32 -2.39 -0.02 -0.45 16 39 H 0.07 0.00 8.14 -2.39 -0.02 -0.02 16 40 H 0.14 -0.30 8.06 -2.91 -0.02 -0.32 16 41 H 0.15 -0.94 8.06 -2.91 -0.02 -0.97 16 42 H 0.15 -1.10 8.06 -2.91 -0.02 -1.12 16 43 H 0.15 -0.98 6.67 -2.91 -0.02 -1.00 16 44 H 0.09 -0.56 8.14 -2.39 -0.02 -0.58 16 45 H 0.11 -0.70 7.72 -2.39 -0.02 -0.72 16 46 H 0.16 -1.52 6.39 -2.91 -0.02 -1.53 16 Total: 0.00 -20.40 391.76 -0.82 -21.21 By element: Atomic # 1 Polarization: -24.24 SS G_CDS: -0.75 Total: -25.00 kcal Atomic # 6 Polarization: 4.74 SS G_CDS: 3.24 Total: 7.98 kcal Atomic # 7 Polarization: 1.26 SS G_CDS: -2.31 Total: -1.05 kcal Atomic # 8 Polarization: -5.84 SS G_CDS: -2.99 Total: -8.83 kcal Atomic # 14 Polarization: 3.75 SS G_CDS: 2.07 Total: 5.82 kcal Atomic # 17 Polarization: -0.06 SS G_CDS: -0.07 Total: -0.14 kcal Total: -20.40 -0.82 -21.21 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10565092_13287732.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -16.801 kcal (2) G-P(sol) polarization free energy of solvation -20.399 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -37.200 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.815 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.214 kcal (6) G-S(sol) free energy of system = (1) + (5) -38.016 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.26 seconds