Wall clock time and date at job start Sat Mar 6 2021 13:14:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86299 * 109.47285 * 2 1 4 4 C 1.50698 * 109.47535 * 120.00165 * 2 1 3 5 5 C 1.34847 * 125.90330 * 217.32315 * 4 2 1 6 6 C 1.40939 * 107.46984 * 179.97438 * 5 4 2 7 7 C 1.34850 * 107.47037 * 0.02562 * 6 5 4 8 8 N 1.36573 * 125.89522 * 37.01245 * 4 2 1 9 9 C 1.40196 * 125.67101 * 0.02562 * 8 4 2 10 10 C 1.38828 * 120.06158 * 235.49872 * 9 8 4 11 11 C 1.38125 * 119.92909 * 179.69936 * 10 9 8 12 12 C 1.38278 * 120.06573 * 0.59856 * 11 10 9 13 13 C 1.50704 * 119.93361 * 179.69785 * 12 11 10 14 14 C 1.50698 * 109.47451 * 269.97584 * 13 12 11 15 15 O 1.21284 * 119.99716 * 0.02562 * 14 13 12 16 16 N 1.34769 * 120.00128 * 180.02562 * 14 13 12 17 17 C 1.46504 * 119.99944 * 180.02562 * 16 14 13 18 18 H 1.08998 * 112.84615 * 334.65959 * 17 16 14 19 19 C 1.53778 * 113.61777 * 105.86293 * 17 16 14 20 20 C 1.54053 * 86.98735 * 89.15870 * 19 17 16 21 21 H 1.08997 * 113.61398 * 270.88667 * 20 19 17 22 22 C 1.50697 * 113.69189 * 139.98937 * 20 19 17 23 23 C 1.38334 * 120.00398 * 142.47354 * 22 20 19 24 24 Cl 1.73593 * 120.01263 * 359.97438 * 23 22 20 25 25 C 1.38374 * 119.97109 * 179.97438 * 23 22 20 26 26 C 1.38194 * 119.99230 * 359.97438 * 25 23 22 27 27 C 1.38271 * 120.00863 * 0.03335 * 26 25 23 28 28 C 1.38219 * 120.02583 * 359.69473 * 27 26 25 29 29 C 1.53785 * 87.07631 * 25.43445 * 20 19 17 30 30 C 1.38283 * 120.13341 * 359.67858 * 12 11 10 31 31 C 1.38119 * 120.06027 * 0.02562 * 30 12 11 32 32 H 0.96694 * 113.99835 * 305.50201 * 1 2 3 33 33 H 1.09000 * 109.47291 * 240.00115 * 2 1 3 34 34 H 1.48492 * 110.00419 * 178.68291 * 3 2 1 35 35 H 1.48503 * 110.00196 * 300.00500 * 3 2 1 36 36 H 1.08007 * 126.26459 * 359.94108 * 5 4 2 37 37 H 1.08008 * 126.26595 * 180.02562 * 6 5 4 38 38 H 1.08002 * 125.90189 * 180.02562 * 7 6 5 39 39 H 1.07992 * 120.04012 * 359.97438 * 10 9 8 40 40 H 1.08001 * 119.96912 * 180.30047 * 11 10 9 41 41 H 1.08997 * 109.47300 * 29.98556 * 13 12 11 42 42 H 1.09002 * 109.46726 * 149.98039 * 13 12 11 43 43 H 0.96996 * 120.00024 * 359.97438 * 16 14 13 44 44 H 1.09001 * 113.61452 * 203.66405 * 19 17 16 45 45 H 1.08998 * 113.61490 * 334.56310 * 19 17 16 46 46 H 1.08004 * 120.00304 * 179.97438 * 25 23 22 47 47 H 1.07994 * 119.99456 * 180.02562 * 26 25 23 48 48 H 1.07998 * 119.98552 * 179.97438 * 27 26 25 49 49 H 1.07998 * 119.99465 * 180.29827 * 28 27 26 50 50 H 1.08998 * 113.61006 * 220.02397 * 29 20 19 51 51 H 1.08989 * 113.61722 * 89.11802 * 29 20 19 52 52 H 1.07997 * 119.97107 * 179.97438 * 30 12 11 53 53 H 1.07996 * 120.03176 * 180.02562 * 31 30 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 3.0140 -0.3649 1.9564 6 6 3.1253 -1.2879 3.0156 7 6 2.1070 -2.1641 2.8978 8 7 1.3655 -1.8120 1.8062 9 6 0.2167 -2.4737 1.3503 10 6 -0.8623 -2.6617 2.2034 11 6 -1.9951 -3.3085 1.7494 12 6 -2.0504 -3.7796 0.4505 13 6 -3.2853 -4.4909 -0.0396 14 6 -3.1514 -5.9688 0.2232 15 8 -2.1518 -6.4017 0.7564 16 7 -4.1424 -6.8093 -0.1343 17 6 -4.0124 -8.2459 0.1217 18 1 -2.9744 -8.5732 0.1799 19 6 -4.8821 -8.7451 1.2875 20 6 -5.9970 -8.9767 0.2499 21 1 -6.6362 -8.1076 0.0946 22 6 -6.7786 -10.2455 0.4738 23 6 -8.1417 -10.2688 0.2393 24 17 -8.9525 -8.8364 -0.3124 25 6 -8.8586 -11.4345 0.4446 26 6 -8.2125 -12.5746 0.8832 27 6 -6.8500 -12.5506 1.1176 28 6 -6.1325 -11.3882 0.9073 29 6 -4.8822 -9.1170 -0.8001 30 6 -0.9750 -3.5988 -0.3998 31 6 0.1582 -2.9474 0.0467 32 1 -0.3933 0.5130 0.7191 33 1 1.7923 -0.5138 -0.8900 34 1 3.5345 1.7703 0.0321 35 1 1.5614 2.4680 -1.2084 36 1 3.6751 0.4667 1.7615 37 1 3.8868 -1.2927 3.7815 38 1 1.9089 -2.9971 3.5560 39 1 -0.8177 -2.2987 3.2195 40 1 -2.8368 -3.4509 2.4111 41 1 -4.1591 -4.1060 0.4862 42 1 -3.4015 -4.3213 -1.1100 43 1 -4.9420 -6.4629 -0.5604 44 1 -4.5138 -9.6634 1.7450 45 1 -5.1179 -7.9719 2.0187 46 1 -9.9229 -11.4531 0.2620 47 1 -8.7719 -13.4845 1.0430 48 1 -6.3456 -13.4417 1.4608 49 1 -5.0675 -11.3713 1.0859 50 1 -5.1181 -8.6437 -1.7532 51 1 -4.5140 -10.1367 -0.9123 52 1 -1.0208 -3.9682 -1.4136 53 1 0.9976 -2.8061 -0.6179 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10565092_13287746.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:14:35 Heat of formation + Delta-G solvation = 72.450504 kcal Electronic energy + Delta-G solvation = -36350.684815 eV Core-core repulsion = 31567.750149 eV Total energy + Delta-G solvation = -4782.934666 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 423.139 amu Computer time = 1.77 seconds Orbital eigenvalues (eV) -42.69448 -41.65299 -40.68116 -39.73551 -38.72324 -37.69147 -37.41687 -34.86683 -34.57172 -32.18241 -32.12450 -31.67746 -31.40353 -31.04831 -27.98239 -26.73594 -26.11799 -26.03559 -23.96467 -23.89915 -23.40911 -22.55496 -21.66378 -21.45190 -20.62277 -20.14663 -19.25328 -18.53293 -17.91305 -17.49013 -17.24108 -17.06479 -16.79042 -16.41364 -16.30334 -16.15845 -15.80724 -15.77889 -15.37589 -15.23485 -15.10464 -14.81272 -14.76925 -14.64161 -14.49651 -14.42335 -14.38093 -14.20760 -13.96574 -13.56732 -13.40048 -13.35249 -13.24494 -13.00919 -12.90443 -12.71485 -12.59062 -12.47752 -12.18733 -12.15441 -12.03347 -11.94690 -11.75921 -11.52922 -11.26069 -11.02914 -10.74917 -10.24910 -10.09469 -9.99161 -9.84173 -9.58876 -9.23510 -9.09713 -4.96595 0.01142 0.17222 0.27753 0.35278 1.07010 1.16146 1.32975 1.60932 1.64213 1.86585 1.95578 2.07865 2.12674 2.62008 2.71706 3.39720 3.41512 3.59052 3.62093 3.65851 3.67026 3.75934 3.85246 3.88282 3.94374 3.99342 4.09974 4.12960 4.16647 4.23184 4.32347 4.38436 4.39404 4.40810 4.48703 4.51116 4.60730 4.63259 4.63757 4.71296 4.74603 4.80868 4.86576 4.91489 4.96253 4.97457 5.00512 5.13771 5.18389 5.21065 5.22459 5.29013 5.35379 5.42857 5.48597 5.50182 5.61936 5.79309 5.85622 5.92033 6.16808 6.48960 6.53219 6.63422 7.24981 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.547 6.547 2 C -0.053 4.053 3 Si 0.806 3.194 4 C -0.018 4.018 5 C -0.204 4.204 6 C -0.199 4.199 7 C -0.019 4.019 8 N -0.395 5.395 9 C 0.119 3.881 10 C -0.120 4.120 11 C -0.095 4.095 12 C -0.066 4.066 13 C -0.098 4.098 14 C 0.517 3.483 15 O -0.577 6.577 16 N -0.703 5.703 17 C 0.119 3.881 18 H 0.085 0.915 19 C -0.139 4.139 20 C -0.075 4.075 21 H 0.106 0.894 22 C -0.070 4.070 23 C -0.050 4.050 24 Cl -0.074 7.074 25 C -0.122 4.122 26 C -0.117 4.117 27 C -0.117 4.117 28 C -0.112 4.112 29 C -0.123 4.123 30 C -0.098 4.098 31 C -0.109 4.109 32 H 0.389 0.611 33 H 0.101 0.899 34 H -0.282 1.282 35 H -0.288 1.288 36 H 0.151 0.849 37 H 0.155 0.845 38 H 0.174 0.826 39 H 0.136 0.864 40 H 0.147 0.853 41 H 0.135 0.865 42 H 0.130 0.870 43 H 0.416 0.584 44 H 0.099 0.901 45 H 0.068 0.932 46 H 0.139 0.861 47 H 0.149 0.851 48 H 0.147 0.853 49 H 0.146 0.854 50 H 0.085 0.915 51 H 0.102 0.898 52 H 0.136 0.864 53 H 0.112 0.888 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.401 -0.761 0.485 5.476 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.353 6.353 2 C -0.163 4.163 3 Si 0.709 3.291 4 C -0.128 4.128 5 C -0.229 4.229 6 C -0.222 4.222 7 C -0.146 4.146 8 N -0.068 5.068 9 C 0.029 3.971 10 C -0.139 4.139 11 C -0.113 4.113 12 C -0.067 4.067 13 C -0.137 4.137 14 C 0.305 3.695 15 O -0.456 6.456 16 N -0.356 5.356 17 C 0.013 3.987 18 H 0.104 0.896 19 C -0.177 4.177 20 C -0.093 4.093 21 H 0.124 0.876 22 C -0.071 4.071 23 C -0.076 4.076 24 Cl -0.045 7.045 25 C -0.140 4.140 26 C -0.136 4.136 27 C -0.135 4.135 28 C -0.130 4.130 29 C -0.161 4.161 30 C -0.117 4.117 31 C -0.128 4.128 32 H 0.238 0.762 33 H 0.118 0.882 34 H -0.208 1.208 35 H -0.216 1.216 36 H 0.169 0.831 37 H 0.172 0.828 38 H 0.191 0.809 39 H 0.154 0.846 40 H 0.164 0.836 41 H 0.153 0.847 42 H 0.148 0.852 43 H 0.253 0.747 44 H 0.117 0.883 45 H 0.086 0.914 46 H 0.157 0.843 47 H 0.166 0.834 48 H 0.165 0.835 49 H 0.163 0.837 50 H 0.104 0.896 51 H 0.121 0.879 52 H 0.154 0.846 53 H 0.130 0.870 Dipole moment (debyes) X Y Z Total from point charges -4.484 -0.874 -0.239 4.574 hybrid contribution -0.119 -0.582 -0.348 0.688 sum -4.603 -1.456 -0.587 4.863 Atomic orbital electron populations 1.86480 1.16955 1.76505 1.55347 1.24996 0.85450 1.11345 0.94477 0.93036 0.77995 0.73862 0.84229 1.21280 0.98587 0.92488 1.00397 1.20978 0.99736 1.03822 0.98357 1.21175 1.01264 0.97730 1.02081 1.22316 0.95469 1.03621 0.93229 1.41554 1.20357 1.22089 1.22779 1.17720 0.86591 0.98424 0.94330 1.21140 0.92021 1.00676 1.00034 1.21100 0.98045 0.96842 0.95320 1.19553 0.95484 0.97597 0.94034 1.20763 0.97766 0.89206 1.06013 1.20982 0.82164 0.89354 0.77017 1.90747 1.31626 1.79250 1.43955 1.45618 1.21331 1.06402 1.62200 1.21766 0.99630 0.80660 0.96634 0.89649 1.23580 0.95400 1.02181 0.96556 1.21730 0.94769 0.95082 0.97743 0.87580 1.19718 0.91470 0.96611 0.99275 1.21033 0.93026 0.89011 1.04536 1.98359 1.79142 1.38759 1.88227 1.21305 1.01057 0.91686 0.99966 1.21441 0.95222 0.98383 0.98505 1.21592 0.94440 0.98948 0.98485 1.21246 1.01144 0.91710 0.98938 1.23351 0.94140 1.01037 0.97571 1.21016 0.92247 0.97890 1.00510 1.20920 0.98944 0.98275 0.94653 0.76221 0.88168 1.20844 1.21564 0.83115 0.82781 0.80879 0.84615 0.83577 0.84747 0.85178 0.74668 0.88300 0.91368 0.84311 0.83365 0.83475 0.83660 0.89600 0.87930 0.84580 0.87014 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -1.22 10.87 -148.98 -1.62 -2.84 16 2 C -0.05 -0.14 2.50 71.24 0.18 0.04 16 3 Si 0.81 -0.59 30.96 68.60 2.12 1.53 16 4 C -0.02 -0.10 6.12 41.04 0.25 0.15 16 5 C -0.20 -1.07 9.40 22.15 0.21 -0.86 16 6 C -0.20 -1.04 10.86 22.15 0.24 -0.80 16 7 C -0.02 -0.11 11.21 83.18 0.93 0.82 16 8 N -0.39 -2.67 2.84 -333.41 -0.95 -3.62 16 9 C 0.12 0.76 4.67 38.08 0.18 0.93 16 10 C -0.12 -0.42 9.76 22.38 0.22 -0.20 16 11 C -0.09 -0.14 9.69 22.25 0.22 0.08 16 12 C -0.07 -0.09 4.38 -19.84 -0.09 -0.17 16 13 C -0.10 0.50 5.83 29.10 0.17 0.67 16 14 C 0.52 0.42 7.82 87.66 0.69 1.10 16 15 O -0.58 -6.35 15.65 -3.04 -0.05 -6.40 16 16 N -0.70 2.82 5.26 -440.03 -2.32 0.51 16 17 C 0.12 -0.26 4.30 45.52 0.20 -0.06 16 18 H 0.09 0.20 7.50 -2.39 -0.02 0.19 16 19 C -0.14 0.36 7.27 31.21 0.23 0.59 16 20 C -0.08 0.26 3.65 -10.92 -0.04 0.22 16 21 H 0.11 -0.38 6.57 -2.39 -0.02 -0.40 16 22 C -0.07 0.06 5.29 -19.84 -0.11 -0.05 16 23 C -0.05 -0.05 6.31 22.33 0.14 0.09 16 24 Cl -0.07 -0.07 27.16 -2.72 -0.07 -0.14 16 25 C -0.12 0.01 9.83 22.29 0.22 0.23 16 26 C -0.12 0.26 10.05 22.27 0.22 0.49 16 27 C -0.12 0.34 10.05 22.27 0.22 0.57 16 28 C -0.11 0.27 8.60 22.27 0.19 0.46 16 29 C -0.12 0.60 7.29 31.12 0.23 0.83 16 30 C -0.10 -0.38 9.69 22.25 0.22 -0.16 16 31 C -0.11 -0.74 8.49 22.38 0.19 -0.55 16 32 H 0.39 -1.64 8.60 -74.06 -0.64 -2.27 16 33 H 0.10 0.42 7.96 -2.39 -0.02 0.40 16 34 H -0.28 -1.09 6.85 99.48 0.68 -0.41 16 35 H -0.29 -1.42 7.11 99.48 0.71 -0.72 16 36 H 0.15 0.38 6.45 -2.91 -0.02 0.36 16 37 H 0.15 0.25 8.06 -2.91 -0.02 0.23 16 38 H 0.17 0.45 8.06 -2.91 -0.02 0.42 16 39 H 0.14 0.15 8.06 -2.91 -0.02 0.13 16 40 H 0.15 -0.44 8.06 -2.91 -0.02 -0.46 16 41 H 0.13 -1.41 8.08 -2.39 -0.02 -1.43 16 42 H 0.13 -1.26 8.08 -2.39 -0.02 -1.28 16 43 H 0.42 -4.03 8.70 -92.71 -0.81 -4.84 16 44 H 0.10 -0.34 6.34 -2.39 -0.02 -0.36 16 45 H 0.07 -0.05 8.14 -2.39 -0.02 -0.07 16 46 H 0.14 -0.30 8.06 -2.91 -0.02 -0.33 16 47 H 0.15 -0.93 8.06 -2.91 -0.02 -0.95 16 48 H 0.15 -1.03 8.06 -2.91 -0.02 -1.06 16 49 H 0.15 -0.83 6.69 -2.91 -0.02 -0.85 16 50 H 0.09 -0.52 8.14 -2.39 -0.02 -0.54 16 51 H 0.10 -0.55 7.71 -2.39 -0.02 -0.57 16 52 H 0.14 0.09 8.06 -2.91 -0.02 0.07 16 53 H 0.11 0.86 8.06 -2.91 -0.02 0.84 16 Total: 0.00 -22.19 451.27 1.75 -20.44 By element: Atomic # 1 Polarization: -13.42 SS G_CDS: -0.47 Total: -13.89 kcal Atomic # 6 Polarization: -0.69 SS G_CDS: 5.10 Total: 4.41 kcal Atomic # 7 Polarization: 0.15 SS G_CDS: -3.26 Total: -3.11 kcal Atomic # 8 Polarization: -7.57 SS G_CDS: -1.67 Total: -9.24 kcal Atomic # 14 Polarization: -0.59 SS G_CDS: 2.12 Total: 1.53 kcal Atomic # 17 Polarization: -0.07 SS G_CDS: -0.07 Total: -0.14 kcal Total: -22.19 1.75 -20.44 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10565092_13287746.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 92.892 kcal (2) G-P(sol) polarization free energy of solvation -22.194 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 70.698 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.752 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.442 kcal (6) G-S(sol) free energy of system = (1) + (5) 72.451 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.77 seconds