Wall clock time and date at job start Sat Mar 6 2021 13:14:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42892 * 1 3 3 Si 1.86298 * 109.47605 * 2 1 4 4 C 1.50699 * 109.47249 * 239.99737 * 2 1 3 5 5 C 1.38353 * 120.35096 * 299.72538 * 4 2 1 6 6 C 1.40027 * 118.28952 * 179.74030 * 5 4 2 7 7 C 1.47838 * 120.55812 * 180.28544 * 6 5 4 8 8 O 1.21553 * 120.00260 * 0.26937 * 7 6 5 9 9 N 1.34778 * 119.99877 * 180.27143 * 7 6 5 10 10 C 1.46504 * 120.00189 * 179.97438 * 9 7 6 11 11 H 1.09004 * 112.84769 * 334.66718 * 10 9 7 12 12 C 1.53780 * 113.61451 * 105.86171 * 10 9 7 13 13 C 1.54058 * 86.98381 * 89.16436 * 12 10 9 14 14 H 1.09004 * 113.61035 * 270.88726 * 13 12 10 15 15 C 1.50699 * 113.69516 * 139.98608 * 13 12 10 16 16 C 1.38333 * 120.00065 * 142.19296 * 15 13 12 17 17 Cl 1.73593 * 120.01778 * 359.97438 * 16 15 13 18 18 C 1.38380 * 119.96706 * 179.70480 * 16 15 13 19 19 C 1.38193 * 119.98636 * 0.59265 * 18 16 15 20 20 C 1.38258 * 120.01476 * 359.70268 * 19 18 16 21 21 C 1.38216 * 120.02782 * 359.97438 * 20 19 18 22 22 C 1.53781 * 113.61545 * 203.47410 * 10 9 7 23 23 C 1.39522 * 118.88140 * 0.54839 * 6 5 4 24 24 N 1.31691 * 120.56554 * 359.71305 * 23 6 5 25 25 C 1.31920 * 121.88203 * 359.97438 * 24 23 6 26 26 H 0.96703 * 114.00176 * 60.00012 * 1 2 3 27 27 H 1.09004 * 109.47449 * 120.00278 * 2 1 3 28 28 H 1.48506 * 109.99834 * 298.68369 * 3 2 1 29 29 H 1.48502 * 110.00011 * 59.99633 * 3 2 1 30 30 H 1.08001 * 120.85323 * 359.97438 * 5 4 2 31 31 H 0.96996 * 120.00015 * 0.02562 * 9 7 6 32 32 H 1.08997 * 113.61515 * 203.66131 * 12 10 9 33 33 H 1.08998 * 113.61284 * 334.57141 * 12 10 9 34 34 H 1.08002 * 120.00635 * 180.32276 * 18 16 15 35 35 H 1.08003 * 119.98941 * 179.72682 * 19 18 16 36 36 H 1.08005 * 119.98631 * 179.97438 * 20 19 18 37 37 H 1.07999 * 119.99825 * 180.02562 * 21 20 19 38 38 H 1.09000 * 113.61242 * 25.42882 * 22 10 9 39 39 H 1.09000 * 113.61641 * 156.24846 * 22 10 9 40 40 H 1.07997 * 119.71388 * 179.68573 * 23 6 5 41 41 H 1.08002 * 119.46311 * 180.02562 * 25 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2304 5 6 1.6062 -2.0366 -1.4536 6 6 2.0916 -2.6527 -2.6136 7 6 1.7698 -4.0658 -2.9051 8 8 1.0743 -4.7017 -2.1373 9 7 2.2476 -4.6492 -4.0222 10 6 1.9291 -6.0498 -4.3108 11 1 1.7025 -6.6259 -3.4136 12 6 0.8945 -6.2273 -5.4346 13 6 2.0824 -6.2398 -6.4154 14 1 2.3613 -5.2497 -6.7760 15 6 1.9404 -7.2487 -7.5259 16 6 2.3744 -6.9382 -8.8021 17 17 3.0822 -5.3864 -9.1252 18 6 2.2492 -7.8673 -9.8200 19 6 1.6795 -9.1000 -9.5636 20 6 1.2404 -9.4074 -8.2892 21 6 1.3712 -8.4823 -7.2706 22 6 2.9447 -6.7333 -5.2415 23 6 2.8888 -1.9120 -3.4869 24 7 3.1752 -0.6530 -3.2276 25 6 2.7269 -0.0449 -2.1461 26 1 -0.3934 0.4417 -0.7651 27 1 1.7923 -0.5139 0.8900 28 1 1.5879 2.4585 -1.2243 29 1 1.5615 2.4679 1.2085 30 1 0.9907 -2.5815 -0.7532 31 1 2.8029 -4.1420 -4.6347 32 1 0.3571 -7.1745 -5.3877 33 1 0.2331 -5.3699 -5.5586 34 1 2.5926 -7.6275 -10.8154 35 1 1.5778 -9.8235 -10.3590 36 1 0.7949 -10.3708 -8.0895 37 1 1.0284 -8.7231 -6.2752 38 1 3.9373 -6.2840 -5.2098 39 1 2.9678 -7.8184 -5.1409 40 1 3.2746 -2.3753 -4.3829 41 1 2.9856 0.9891 -1.9723 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10565092_13287814.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:14:41 Heat of formation + Delta-G solvation = 22.030790 kcal Electronic energy + Delta-G solvation = -26341.404398 eV Core-core repulsion = 22407.574648 eV Total energy + Delta-G solvation = -3933.829750 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.092 amu Computer time = 0.77 seconds Orbital eigenvalues (eV) -42.07799 -41.39789 -40.20062 -38.84867 -38.10596 -37.44130 -34.89796 -33.79423 -33.12509 -31.77191 -31.70094 -27.37800 -26.88148 -26.84871 -25.44897 -23.94160 -23.75781 -22.72645 -21.83429 -20.32913 -19.36288 -18.45829 -18.18319 -17.88550 -17.74624 -17.06844 -16.60413 -16.56265 -16.46182 -16.05826 -15.94046 -15.33984 -15.27643 -14.90721 -14.86434 -14.59984 -14.48784 -14.41488 -14.22268 -13.65462 -13.51251 -13.44768 -13.08552 -12.84172 -12.78125 -12.52879 -12.26718 -12.11734 -11.88533 -11.60144 -11.39159 -11.36218 -11.09761 -10.75905 -10.57648 -10.41841 -10.18911 -9.92490 -9.66091 -5.09652 -0.61167 -0.05270 0.09798 0.19201 1.09859 1.13405 1.46263 1.67560 1.81939 1.89496 2.52818 2.59465 2.97977 3.19349 3.27504 3.33610 3.47184 3.52587 3.57051 3.65077 3.71305 3.72905 3.82226 3.95007 4.01741 4.06656 4.16256 4.25804 4.28287 4.43183 4.51334 4.57224 4.61676 4.68120 4.76940 4.81189 4.85323 4.87011 4.89636 4.99116 5.19104 5.25347 5.31373 5.38238 5.47309 5.73773 6.24007 6.27649 6.59509 7.02260 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.525 6.525 2 C -0.071 4.071 3 Si 0.685 3.315 4 C -0.178 4.178 5 C 0.012 3.988 6 C -0.189 4.189 7 C 0.569 3.431 8 O -0.525 6.525 9 N -0.708 5.708 10 C 0.121 3.879 11 H 0.109 0.891 12 C -0.142 4.142 13 C -0.082 4.082 14 H 0.105 0.895 15 C -0.062 4.062 16 C -0.033 4.033 17 Cl -0.068 7.068 18 C -0.108 4.108 19 C -0.111 4.111 20 C -0.111 4.111 21 C -0.106 4.106 22 C -0.133 4.133 23 C 0.140 3.860 24 N -0.477 5.477 25 C 0.129 3.871 26 H 0.377 0.623 27 H 0.125 0.875 28 H -0.255 1.255 29 H -0.250 1.250 30 H 0.153 0.847 31 H 0.401 0.599 32 H 0.097 0.903 33 H 0.077 0.923 34 H 0.134 0.866 35 H 0.132 0.868 36 H 0.130 0.870 37 H 0.133 0.867 38 H 0.080 0.920 39 H 0.101 0.899 40 H 0.161 0.839 41 H 0.164 0.836 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.721 -1.047 -1.857 3.457 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.331 6.331 2 C -0.181 4.181 3 Si 0.585 3.415 4 C -0.180 4.180 5 C -0.014 4.014 6 C -0.194 4.194 7 C 0.355 3.645 8 O -0.401 6.401 9 N -0.359 5.359 10 C 0.016 3.984 11 H 0.127 0.873 12 C -0.181 4.181 13 C -0.100 4.100 14 H 0.123 0.877 15 C -0.063 4.063 16 C -0.060 4.060 17 Cl -0.039 7.039 18 C -0.127 4.127 19 C -0.129 4.129 20 C -0.129 4.129 21 C -0.124 4.124 22 C -0.171 4.171 23 C -0.019 4.019 24 N -0.185 5.185 25 C -0.027 4.027 26 H 0.225 0.775 27 H 0.143 0.857 28 H -0.180 1.180 29 H -0.175 1.175 30 H 0.170 0.830 31 H 0.237 0.763 32 H 0.116 0.884 33 H 0.095 0.905 34 H 0.151 0.849 35 H 0.150 0.850 36 H 0.148 0.852 37 H 0.151 0.849 38 H 0.098 0.902 39 H 0.119 0.881 40 H 0.178 0.822 41 H 0.180 0.820 Dipole moment (debyes) X Y Z Total from point charges 2.682 -0.375 -1.361 3.031 hybrid contribution -1.232 -0.331 -0.542 1.386 sum 1.450 -0.707 -1.903 2.495 Atomic orbital electron populations 1.86644 1.17232 1.79913 1.49355 1.24994 0.84278 1.11201 0.97662 0.95089 0.91406 0.73939 0.81063 1.21377 1.01551 0.95668 0.99418 1.21634 0.92583 0.92931 0.94256 1.21012 1.04130 0.95528 0.98707 1.17991 0.79572 0.85936 0.80999 1.90824 1.37246 1.64429 1.47643 1.45566 1.53470 1.12725 1.24185 1.21869 0.96210 0.81844 0.98507 0.87304 1.23618 0.96370 1.03615 0.94454 1.21796 0.98023 0.98246 0.91935 0.87656 1.19538 0.98490 0.95565 0.92688 1.20867 1.02062 0.88286 0.94780 1.98372 1.82415 1.27664 1.95419 1.21111 0.99666 0.93135 0.98791 1.21178 0.98085 0.96221 0.97429 1.21296 0.99016 0.99721 0.92910 1.21013 0.99002 0.92460 0.99943 1.23409 0.98242 1.01827 0.93583 1.23038 0.91753 0.89731 0.97341 1.67735 1.21567 1.10102 1.19050 1.22911 0.91442 0.99782 0.88571 0.77480 0.85718 1.17960 1.17491 0.82955 0.76306 0.88420 0.90468 0.84859 0.84986 0.85203 0.84917 0.90170 0.88059 0.82218 0.81977 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.25 12.78 -35.23 -0.45 -0.70 16 2 C -0.07 0.09 2.83 36.01 0.10 0.19 16 3 Si 0.69 -1.49 29.82 -169.99 -5.07 -6.56 16 4 C -0.18 0.10 5.39 -104.53 -0.56 -0.47 16 5 C 0.01 0.01 9.31 -38.87 -0.36 -0.35 16 6 C -0.19 -0.10 5.89 -104.82 -0.62 -0.71 16 7 C 0.57 0.88 7.78 -12.33 -0.10 0.78 16 8 O -0.53 -2.77 16.04 5.32 0.09 -2.68 16 9 N -0.71 0.87 5.22 -53.96 -0.28 0.59 16 10 C 0.12 -0.15 4.29 -67.12 -0.29 -0.44 16 11 H 0.11 0.01 7.50 -51.93 -0.39 -0.38 16 12 C -0.14 0.20 7.27 -25.77 -0.19 0.02 16 13 C -0.08 0.13 3.65 -90.81 -0.33 -0.20 16 14 H 0.11 -0.16 6.57 -51.93 -0.34 -0.50 16 15 C -0.06 0.02 5.29 -104.59 -0.55 -0.53 16 16 C -0.03 -0.02 6.31 -39.49 -0.25 -0.27 16 17 Cl -0.07 -0.04 27.15 -51.86 -1.41 -1.44 16 18 C -0.11 0.00 9.83 -39.55 -0.39 -0.38 16 19 C -0.11 0.10 10.05 -39.59 -0.40 -0.30 16 20 C -0.11 0.13 10.05 -39.58 -0.40 -0.26 16 21 C -0.11 0.12 8.62 -39.59 -0.34 -0.22 16 22 C -0.13 0.33 7.28 -25.92 -0.19 0.14 16 23 C 0.14 -0.09 10.71 -17.13 -0.18 -0.27 16 24 N -0.48 -0.30 10.35 -12.91 -0.13 -0.43 16 25 C 0.13 -0.08 9.84 -17.47 -0.17 -0.25 16 26 H 0.38 -0.89 8.70 45.56 0.40 -0.50 16 27 H 0.13 -0.25 7.96 -51.93 -0.41 -0.66 16 28 H -0.25 0.09 7.11 56.52 0.40 0.49 16 29 H -0.25 -0.31 7.11 56.52 0.40 0.09 16 30 H 0.15 0.23 7.74 -52.49 -0.41 -0.17 16 31 H 0.40 -1.43 6.77 -40.82 -0.28 -1.71 16 32 H 0.10 -0.20 6.33 -51.93 -0.33 -0.53 16 33 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 34 H 0.13 -0.16 8.06 -52.49 -0.42 -0.58 16 35 H 0.13 -0.36 8.06 -52.48 -0.42 -0.78 16 36 H 0.13 -0.39 8.06 -52.48 -0.42 -0.81 16 37 H 0.13 -0.37 6.67 -52.49 -0.35 -0.72 16 38 H 0.08 -0.22 8.14 -51.93 -0.42 -0.65 16 39 H 0.10 -0.29 7.73 -51.93 -0.40 -0.69 16 40 H 0.16 -0.58 6.42 -52.49 -0.34 -0.92 16 41 H 0.16 -0.45 4.88 -52.49 -0.26 -0.70 16 LS Contribution 357.71 15.07 5.39 5.39 Total: 0.00 -8.05 357.71 -11.50 -19.55 By element: Atomic # 1 Polarization: -5.77 SS G_CDS: -4.41 Total: -10.19 kcal Atomic # 6 Polarization: 1.69 SS G_CDS: -5.22 Total: -3.53 kcal Atomic # 7 Polarization: 0.57 SS G_CDS: -0.42 Total: 0.16 kcal Atomic # 8 Polarization: -3.01 SS G_CDS: -0.36 Total: -3.38 kcal Atomic # 14 Polarization: -1.49 SS G_CDS: -5.07 Total: -6.56 kcal Atomic # 17 Polarization: -0.04 SS G_CDS: -1.41 Total: -1.44 kcal Total LS contribution 5.39 Total: 5.39 kcal Total: -8.05 -11.50 -19.55 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10565092_13287814.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 41.579 kcal (2) G-P(sol) polarization free energy of solvation -8.050 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 33.528 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.498 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.548 kcal (6) G-S(sol) free energy of system = (1) + (5) 22.031 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.77 seconds