Wall clock time and date at job start Sat Mar 6 2021 13:14:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42892 * 1 3 3 Si 1.86298 * 109.47605 * 2 1 4 4 C 1.50699 * 109.47249 * 239.99737 * 2 1 3 5 5 C 1.38353 * 120.35096 * 299.72538 * 4 2 1 6 6 C 1.40027 * 118.28952 * 179.74030 * 5 4 2 7 7 C 1.47838 * 120.55812 * 180.28544 * 6 5 4 8 8 O 1.21553 * 120.00260 * 0.26937 * 7 6 5 9 9 N 1.34778 * 119.99877 * 180.27143 * 7 6 5 10 10 C 1.46504 * 120.00189 * 179.97438 * 9 7 6 11 11 H 1.09004 * 112.84769 * 334.66718 * 10 9 7 12 12 C 1.53780 * 113.61451 * 105.86171 * 10 9 7 13 13 C 1.54058 * 86.98381 * 89.16436 * 12 10 9 14 14 H 1.09004 * 113.61035 * 270.88726 * 13 12 10 15 15 C 1.50699 * 113.69516 * 139.98608 * 13 12 10 16 16 C 1.38333 * 120.00065 * 142.19296 * 15 13 12 17 17 Cl 1.73593 * 120.01778 * 359.97438 * 16 15 13 18 18 C 1.38380 * 119.96706 * 179.70480 * 16 15 13 19 19 C 1.38193 * 119.98636 * 0.59265 * 18 16 15 20 20 C 1.38258 * 120.01476 * 359.70268 * 19 18 16 21 21 C 1.38216 * 120.02782 * 359.97438 * 20 19 18 22 22 C 1.53781 * 113.61545 * 203.47410 * 10 9 7 23 23 C 1.39522 * 118.88140 * 0.54839 * 6 5 4 24 24 N 1.31691 * 120.56554 * 359.71305 * 23 6 5 25 25 C 1.31920 * 121.88203 * 359.97438 * 24 23 6 26 26 H 0.96703 * 114.00176 * 60.00012 * 1 2 3 27 27 H 1.09004 * 109.47449 * 120.00278 * 2 1 3 28 28 H 1.48506 * 109.99834 * 298.68369 * 3 2 1 29 29 H 1.48502 * 110.00011 * 59.99633 * 3 2 1 30 30 H 1.08001 * 120.85323 * 359.97438 * 5 4 2 31 31 H 0.96996 * 120.00015 * 0.02562 * 9 7 6 32 32 H 1.08997 * 113.61515 * 203.66131 * 12 10 9 33 33 H 1.08998 * 113.61284 * 334.57141 * 12 10 9 34 34 H 1.08002 * 120.00635 * 180.32276 * 18 16 15 35 35 H 1.08003 * 119.98941 * 179.72682 * 19 18 16 36 36 H 1.08005 * 119.98631 * 179.97438 * 20 19 18 37 37 H 1.07999 * 119.99825 * 180.02562 * 21 20 19 38 38 H 1.09000 * 113.61242 * 25.42882 * 22 10 9 39 39 H 1.09000 * 113.61641 * 156.24846 * 22 10 9 40 40 H 1.07997 * 119.71388 * 179.68573 * 23 6 5 41 41 H 1.08002 * 119.46311 * 180.02562 * 25 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2304 5 6 1.6062 -2.0366 -1.4536 6 6 2.0916 -2.6527 -2.6136 7 6 1.7698 -4.0658 -2.9051 8 8 1.0743 -4.7017 -2.1373 9 7 2.2476 -4.6492 -4.0222 10 6 1.9291 -6.0498 -4.3108 11 1 1.7025 -6.6259 -3.4136 12 6 0.8945 -6.2273 -5.4346 13 6 2.0824 -6.2398 -6.4154 14 1 2.3613 -5.2497 -6.7760 15 6 1.9404 -7.2487 -7.5259 16 6 2.3744 -6.9382 -8.8021 17 17 3.0822 -5.3864 -9.1252 18 6 2.2492 -7.8673 -9.8200 19 6 1.6795 -9.1000 -9.5636 20 6 1.2404 -9.4074 -8.2892 21 6 1.3712 -8.4823 -7.2706 22 6 2.9447 -6.7333 -5.2415 23 6 2.8888 -1.9120 -3.4869 24 7 3.1752 -0.6530 -3.2276 25 6 2.7269 -0.0449 -2.1461 26 1 -0.3934 0.4417 -0.7651 27 1 1.7923 -0.5139 0.8900 28 1 1.5879 2.4585 -1.2243 29 1 1.5615 2.4679 1.2085 30 1 0.9907 -2.5815 -0.7532 31 1 2.8029 -4.1420 -4.6347 32 1 0.3571 -7.1745 -5.3877 33 1 0.2331 -5.3699 -5.5586 34 1 2.5926 -7.6275 -10.8154 35 1 1.5778 -9.8235 -10.3590 36 1 0.7949 -10.3708 -8.0895 37 1 1.0284 -8.7231 -6.2752 38 1 3.9373 -6.2840 -5.2098 39 1 2.9678 -7.8184 -5.1409 40 1 3.2746 -2.3753 -4.3829 41 1 2.9856 0.9891 -1.9723 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10565092_13287814.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:14:40 Heat of formation + Delta-G solvation = 24.620503 kcal Electronic energy + Delta-G solvation = -26341.292100 eV Core-core repulsion = 22407.574648 eV Total energy + Delta-G solvation = -3933.717452 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.092 amu Computer time = 0.92 seconds Orbital eigenvalues (eV) -42.07615 -41.32474 -40.21099 -38.83255 -38.09076 -37.41170 -34.94273 -33.80086 -33.08920 -31.66962 -31.62239 -27.32668 -26.80799 -26.74774 -25.40467 -23.91549 -23.67719 -22.63887 -21.85593 -20.25865 -19.35878 -18.37527 -18.13201 -17.85512 -17.73955 -16.99231 -16.56840 -16.54521 -16.37424 -16.08971 -15.94058 -15.30819 -15.20709 -14.83970 -14.76383 -14.59834 -14.44585 -14.39358 -14.21602 -13.55330 -13.46246 -13.38128 -12.97164 -12.82066 -12.69678 -12.48052 -12.17004 -12.12479 -11.79773 -11.58079 -11.44072 -11.27647 -11.13005 -10.72937 -10.59409 -10.40926 -10.15832 -9.83625 -9.58387 -4.95249 -0.60183 -0.05267 0.18054 0.28689 1.16954 1.21449 1.57649 1.61015 1.86239 1.96497 2.59553 2.63052 3.07468 3.30567 3.37496 3.38771 3.58167 3.61840 3.63805 3.70405 3.73165 3.85007 3.94038 4.08459 4.10193 4.15988 4.25887 4.39022 4.39878 4.52675 4.59816 4.71617 4.75131 4.78090 4.81997 4.87917 4.91570 4.97073 5.00639 5.09342 5.29397 5.30079 5.38854 5.49262 5.56035 5.86630 6.30919 6.39499 6.62962 6.98959 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.547 6.547 2 C -0.082 4.082 3 Si 0.775 3.225 4 C -0.173 4.173 5 C -0.001 4.001 6 C -0.197 4.197 7 C 0.568 3.432 8 O -0.571 6.571 9 N -0.693 5.693 10 C 0.117 3.883 11 H 0.095 0.905 12 C -0.139 4.139 13 C -0.077 4.077 14 H 0.105 0.895 15 C -0.070 4.070 16 C -0.050 4.050 17 Cl -0.075 7.075 18 C -0.122 4.122 19 C -0.118 4.118 20 C -0.116 4.116 21 C -0.111 4.111 22 C -0.121 4.121 23 C 0.146 3.854 24 N -0.493 5.493 25 C 0.130 3.870 26 H 0.387 0.613 27 H 0.131 0.869 28 H -0.274 1.274 29 H -0.298 1.298 30 H 0.138 0.862 31 H 0.414 0.586 32 H 0.105 0.895 33 H 0.066 0.934 34 H 0.138 0.862 35 H 0.148 0.852 36 H 0.148 0.852 37 H 0.148 0.852 38 H 0.088 0.912 39 H 0.109 0.891 40 H 0.188 0.812 41 H 0.184 0.816 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.538 -1.172 -2.595 4.541 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.355 6.355 2 C -0.191 4.191 3 Si 0.678 3.322 4 C -0.175 4.175 5 C -0.027 4.027 6 C -0.202 4.202 7 C 0.356 3.644 8 O -0.450 6.450 9 N -0.345 5.345 10 C 0.012 3.988 11 H 0.113 0.887 12 C -0.178 4.178 13 C -0.096 4.096 14 H 0.123 0.877 15 C -0.070 4.070 16 C -0.077 4.077 17 Cl -0.046 7.046 18 C -0.140 4.140 19 C -0.136 4.136 20 C -0.134 4.134 21 C -0.129 4.129 22 C -0.159 4.159 23 C -0.012 4.012 24 N -0.201 5.201 25 C -0.026 4.026 26 H 0.237 0.763 27 H 0.148 0.852 28 H -0.200 1.200 29 H -0.226 1.226 30 H 0.156 0.844 31 H 0.252 0.748 32 H 0.123 0.877 33 H 0.084 0.916 34 H 0.156 0.844 35 H 0.166 0.834 36 H 0.166 0.834 37 H 0.166 0.834 38 H 0.106 0.894 39 H 0.127 0.873 40 H 0.205 0.795 41 H 0.201 0.799 Dipole moment (debyes) X Y Z Total from point charges 3.527 -0.517 -2.148 4.162 hybrid contribution -1.531 -0.313 -0.311 1.594 sum 1.996 -0.830 -2.459 3.274 Atomic orbital electron populations 1.86612 1.18268 1.80418 1.50206 1.25286 0.83617 1.12476 0.97694 0.94089 0.89873 0.70963 0.77270 1.21375 1.01446 0.95040 0.99671 1.21648 0.92950 0.93654 0.94465 1.20977 1.04949 0.95124 0.99126 1.18177 0.78995 0.86204 0.81048 1.90799 1.39501 1.65468 1.49272 1.45481 1.52664 1.12861 1.23468 1.21893 0.97148 0.81655 0.98129 0.88736 1.23610 0.96288 1.03544 0.94331 1.21754 0.97976 0.98075 0.91747 0.87728 1.19696 0.98583 0.96118 0.92650 1.21045 1.02915 0.88284 0.95425 1.98361 1.82588 1.28129 1.95484 1.21300 1.00104 0.93573 0.99066 1.21441 0.97711 0.96221 0.98191 1.21594 0.98606 1.00475 0.92743 1.21259 0.98666 0.92196 1.00810 1.23367 0.98123 1.02180 0.92186 1.23410 0.90776 0.89335 0.97697 1.67809 1.22160 1.10559 1.19585 1.23240 0.90743 1.00587 0.88021 0.76308 0.85174 1.19967 1.22578 0.84407 0.74788 0.87711 0.91568 0.84384 0.83398 0.83411 0.83420 0.89362 0.87306 0.79504 0.79950 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.96 12.78 -148.98 -1.90 -2.86 16 2 C -0.08 0.18 2.83 71.24 0.20 0.38 16 3 Si 0.77 -3.57 29.82 68.60 2.05 -1.52 16 4 C -0.17 0.15 5.39 -19.81 -0.11 0.04 16 5 C 0.00 0.00 9.31 22.73 0.21 0.21 16 6 C -0.20 -0.32 5.89 -19.99 -0.12 -0.44 16 7 C 0.57 2.37 7.78 86.78 0.68 3.04 16 8 O -0.57 -7.17 16.04 -3.88 -0.06 -7.24 16 9 N -0.69 1.55 5.22 -442.90 -2.31 -0.76 16 10 C 0.12 -0.26 4.29 45.52 0.20 -0.06 16 11 H 0.09 0.12 7.50 -2.38 -0.02 0.10 16 12 C -0.14 0.37 7.27 31.21 0.23 0.60 16 13 C -0.08 0.27 3.65 -10.92 -0.04 0.23 16 14 H 0.10 -0.35 6.57 -2.39 -0.02 -0.37 16 15 C -0.07 0.07 5.29 -19.84 -0.11 -0.04 16 16 C -0.05 -0.06 6.31 22.33 0.14 0.08 16 17 Cl -0.07 -0.09 27.15 -2.72 -0.07 -0.17 16 18 C -0.12 0.00 9.83 22.29 0.22 0.22 16 19 C -0.12 0.27 10.05 22.26 0.22 0.50 16 20 C -0.12 0.38 10.05 22.27 0.22 0.60 16 21 C -0.11 0.32 8.62 22.26 0.19 0.51 16 22 C -0.12 0.66 7.28 31.12 0.23 0.89 16 23 C 0.15 -0.27 10.71 85.02 0.91 0.64 16 24 N -0.49 -0.21 10.35 -194.75 -2.01 -2.23 16 25 C 0.13 -0.24 9.84 84.71 0.83 0.59 16 26 H 0.39 -1.57 8.70 -74.06 -0.64 -2.21 16 27 H 0.13 -0.47 7.96 -2.38 -0.02 -0.49 16 28 H -0.27 0.40 7.11 99.48 0.71 1.11 16 29 H -0.30 -1.03 7.11 99.48 0.71 -0.32 16 30 H 0.14 0.76 7.74 -2.91 -0.02 0.73 16 31 H 0.41 -3.20 6.77 -92.71 -0.63 -3.83 16 32 H 0.10 -0.44 6.33 -2.39 -0.02 -0.45 16 33 H 0.07 -0.01 8.14 -2.39 -0.02 -0.03 16 34 H 0.14 -0.27 8.06 -2.91 -0.02 -0.30 16 35 H 0.15 -0.93 8.06 -2.91 -0.02 -0.95 16 36 H 0.15 -1.09 8.06 -2.91 -0.02 -1.12 16 37 H 0.15 -0.97 6.67 -2.91 -0.02 -0.99 16 38 H 0.09 -0.59 8.14 -2.39 -0.02 -0.61 16 39 H 0.11 -0.72 7.73 -2.39 -0.02 -0.74 16 40 H 0.19 -1.61 6.42 -2.91 -0.02 -1.63 16 41 H 0.18 -1.25 4.88 -2.91 -0.01 -1.27 16 Total: 0.00 -19.80 357.71 -0.34 -20.14 By element: Atomic # 1 Polarization: -13.24 SS G_CDS: -0.13 Total: -13.37 kcal Atomic # 6 Polarization: 3.89 SS G_CDS: 4.11 Total: 8.00 kcal Atomic # 7 Polarization: 1.34 SS G_CDS: -4.33 Total: -2.99 kcal Atomic # 8 Polarization: -8.14 SS G_CDS: -1.97 Total: -10.10 kcal Atomic # 14 Polarization: -3.57 SS G_CDS: 2.05 Total: -1.52 kcal Atomic # 17 Polarization: -0.09 SS G_CDS: -0.07 Total: -0.17 kcal Total: -19.80 -0.34 -20.14 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10565092_13287814.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 44.758 kcal (2) G-P(sol) polarization free energy of solvation -19.802 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 24.956 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.336 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.138 kcal (6) G-S(sol) free energy of system = (1) + (5) 24.621 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.92 seconds