Wall clock time and date at job start Sat Mar 6 2021 13:14:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.36415 * 125.80166 * 2 1 4 4 C 1.47380 * 127.19120 * 0.02562 * 3 2 1 5 5 O 1.21613 * 120.00134 * 359.70922 * 4 3 2 6 6 N 1.34777 * 119.99615 * 179.70612 * 4 3 2 7 7 C 1.46499 * 119.99665 * 179.72401 * 6 4 3 8 8 H 1.08998 * 112.85361 * 336.47110 * 7 6 4 9 9 C 1.53778 * 113.61557 * 107.77998 * 7 6 4 10 10 C 1.53780 * 87.08092 * 89.11527 * 9 7 6 11 11 H 1.09003 * 113.69422 * 270.87401 * 10 9 7 12 12 C 1.50699 * 113.61686 * 139.97970 * 10 9 7 13 13 C 1.38334 * 120.00968 * 142.23059 * 12 10 9 14 14 Cl 1.73602 * 120.00888 * 359.97438 * 13 12 10 15 15 C 1.38375 * 119.97582 * 179.70717 * 13 12 10 16 16 C 1.38196 * 119.98617 * 0.59221 * 15 13 12 17 17 C 1.38268 * 120.01131 * 359.70163 * 16 15 13 18 18 C 1.38218 * 120.02658 * 359.97438 * 17 16 15 19 19 C 1.53783 * 87.08328 * 25.43430 * 10 9 7 20 20 C 1.47022 * 105.61300 * 179.74956 * 3 2 1 21 21 C 1.34177 * 105.95589 * 0.22951 * 20 3 2 22 22 C 1.50695 * 125.43830 * 180.02562 * 21 20 3 23 23 O 1.42907 * 109.46757 * 299.99107 * 22 21 20 24 24 Si 1.86294 * 109.47119 * 179.97438 * 22 21 20 25 25 O 1.33645 * 125.80015 * 180.13654 * 2 1 3 26 26 H 1.09003 * 109.46926 * 89.99946 * 1 2 3 27 27 H 1.08997 * 109.47407 * 210.00104 * 1 2 3 28 28 H 1.09008 * 109.47214 * 330.00423 * 1 2 3 29 29 H 0.97001 * 120.00485 * 0.02562 * 6 4 3 30 30 H 1.08998 * 113.61596 * 203.65958 * 9 7 6 31 31 H 1.08998 * 113.61243 * 334.56847 * 9 7 6 32 32 H 1.08000 * 120.00381 * 180.27322 * 15 13 12 33 33 H 1.07999 * 119.99676 * 179.72919 * 16 15 13 34 34 H 1.07998 * 119.98297 * 179.97438 * 17 16 15 35 35 H 1.07999 * 119.99268 * 180.02562 * 18 17 16 36 36 H 1.09000 * 113.61551 * 220.02042 * 19 10 9 37 37 H 1.09004 * 113.61245 * 89.11513 * 19 10 9 38 38 H 1.07997 * 127.01982 * 180.24072 * 20 3 2 39 39 H 1.08998 * 109.47759 * 59.99081 * 22 21 20 40 40 H 0.96687 * 114.00469 * 300.00226 * 23 22 21 41 41 H 1.48499 * 110.00254 * 58.68010 * 24 22 21 42 42 H 1.48507 * 109.99796 * 179.97438 * 24 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3050 1.1064 0.0000 4 6 1.8739 2.5157 0.0005 5 8 0.6890 2.7892 -0.0043 6 7 2.7930 3.5015 0.0064 7 6 2.3646 4.9024 0.0008 8 1 1.3634 5.0373 -0.4084 9 6 2.5850 5.6194 1.3433 10 6 3.9849 5.9899 0.8258 11 1 4.7478 5.2458 1.0550 12 6 4.4089 7.3915 1.1821 13 6 5.7241 7.6507 1.5237 14 17 6.8865 6.3615 1.5426 15 6 6.1139 8.9390 1.8449 16 6 5.1867 9.9636 1.8362 17 6 3.8709 9.7028 1.5006 18 6 3.4824 8.4174 1.1731 19 6 3.4077 5.8632 -0.5940 20 6 3.6849 0.5990 0.0062 21 6 3.5859 -0.7391 0.0041 22 6 4.7458 -1.7011 0.0092 23 8 5.5486 -1.4854 -1.1532 24 14 4.1026 -3.4495 0.0045 25 8 2.2888 -1.0839 -0.0026 26 1 -0.3633 0.0000 -1.0277 27 1 -0.3634 -0.8899 0.5138 28 1 -0.3634 0.8901 0.5138 29 1 3.7382 3.2834 0.0100 30 1 1.9324 6.4798 1.4911 31 1 2.6005 4.9462 2.2004 32 1 7.1416 9.1427 2.1074 33 1 5.4898 10.9684 2.0911 34 1 3.1466 10.5038 1.4943 35 1 2.4546 8.2144 0.9107 36 1 4.0872 5.3869 -1.3007 37 1 2.9799 6.7903 -0.9757 38 1 4.5927 1.1839 0.0115 39 1 5.3488 -1.5386 0.9025 40 1 5.0759 -1.6129 -1.9869 41 1 3.2525 -3.6747 -1.1921 42 1 5.2369 -4.4080 0.0088 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10565092_13308374.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:14:44 Heat of formation + Delta-G solvation = -5.705106 kcal Electronic energy + Delta-G solvation = -27320.040934 eV Core-core repulsion = 23259.978325 eV Total energy + Delta-G solvation = -4060.062610 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 348.096 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -43.74198 -41.59525 -40.23540 -38.79450 -38.20734 -37.41315 -34.72731 -33.95890 -33.09977 -31.78547 -31.74174 -29.43098 -26.81497 -26.70185 -25.67770 -24.36360 -23.69232 -22.78437 -22.13511 -20.79084 -20.05973 -19.04806 -18.41775 -17.91412 -17.70101 -17.10867 -16.79886 -16.63326 -16.37431 -16.05935 -15.88893 -15.69207 -15.17168 -15.02339 -14.82474 -14.75789 -14.48868 -14.21357 -14.06573 -13.92507 -13.87130 -13.59037 -13.41090 -13.04620 -12.96813 -12.84340 -12.73936 -12.49957 -12.22391 -12.10536 -11.81094 -11.55577 -11.31659 -11.06699 -10.88562 -10.73384 -10.09553 -9.89525 -9.63370 -9.55855 -5.01970 0.12364 0.21733 0.30388 0.82470 1.10439 1.16152 1.41626 1.67362 1.88780 2.12552 2.34300 2.55813 3.06864 3.33291 3.34305 3.52288 3.60217 3.73455 3.76767 3.79435 3.87634 3.97872 4.06430 4.12757 4.26262 4.28761 4.31069 4.41107 4.54667 4.56756 4.61713 4.63982 4.64834 4.74498 4.83244 4.83925 4.89037 4.94775 5.06008 5.12745 5.21442 5.21835 5.36670 5.41186 5.57815 5.76304 5.89858 6.18405 6.49417 7.23637 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.087 4.087 2 C 0.097 3.903 3 C -0.254 4.254 4 C 0.597 3.403 5 O -0.537 6.537 6 N -0.707 5.707 7 C 0.123 3.877 8 H 0.108 0.892 9 C -0.142 4.142 10 C -0.081 4.081 11 H 0.105 0.895 12 C -0.061 4.061 13 C -0.034 4.034 14 Cl -0.068 7.068 15 C -0.108 4.108 16 C -0.111 4.111 17 C -0.111 4.111 18 C -0.106 4.106 19 C -0.134 4.134 20 C -0.148 4.148 21 C -0.054 4.054 22 C -0.034 4.034 23 O -0.521 6.521 24 Si 0.702 3.298 25 O -0.168 6.168 26 H 0.091 0.909 27 H 0.083 0.917 28 H 0.111 0.889 29 H 0.402 0.598 30 H 0.096 0.904 31 H 0.076 0.924 32 H 0.133 0.867 33 H 0.132 0.868 34 H 0.130 0.870 35 H 0.133 0.867 36 H 0.078 0.922 37 H 0.100 0.900 38 H 0.158 0.842 39 H 0.137 0.863 40 H 0.381 0.619 41 H -0.256 1.256 42 H -0.249 1.249 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.387 0.881 1.112 1.471 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.143 4.143 2 C 0.043 3.957 3 C -0.258 4.258 4 C 0.385 3.615 5 O -0.416 6.416 6 N -0.357 5.357 7 C 0.017 3.983 8 H 0.126 0.874 9 C -0.180 4.180 10 C -0.100 4.100 11 H 0.123 0.877 12 C -0.062 4.062 13 C -0.060 4.060 14 Cl -0.039 7.039 15 C -0.127 4.127 16 C -0.130 4.130 17 C -0.130 4.130 18 C -0.124 4.124 19 C -0.172 4.172 20 C -0.168 4.168 21 C -0.103 4.103 22 C -0.144 4.144 23 O -0.327 6.327 24 Si 0.601 3.399 25 O -0.065 6.065 26 H 0.110 0.890 27 H 0.101 0.899 28 H 0.130 0.870 29 H 0.236 0.764 30 H 0.115 0.885 31 H 0.095 0.905 32 H 0.151 0.849 33 H 0.150 0.850 34 H 0.148 0.852 35 H 0.151 0.849 36 H 0.097 0.903 37 H 0.118 0.882 38 H 0.175 0.825 39 H 0.155 0.845 40 H 0.229 0.771 41 H -0.180 1.180 42 H -0.173 1.173 Dipole moment (debyes) X Y Z Total from point charges -0.783 0.011 1.119 1.365 hybrid contribution 1.113 0.662 -1.003 1.638 sum 0.331 0.674 0.115 0.759 Atomic orbital electron populations 1.20709 0.83296 1.05534 1.04744 1.22922 0.94077 0.82831 0.95837 1.21096 0.93244 0.93728 1.17761 1.17146 0.85359 0.83647 0.75302 1.90776 1.16478 1.83955 1.50368 1.45440 1.09711 1.05094 1.75503 1.21824 0.99684 0.79848 0.96941 0.87363 1.23567 0.95530 1.00883 0.98064 1.21739 0.97809 0.93336 0.97087 0.87703 1.19563 0.91451 0.96010 0.99192 1.20869 0.90406 0.89816 1.04921 1.98372 1.58440 1.50032 1.97068 1.21106 1.00764 0.90886 0.99959 1.21175 0.93094 0.99166 0.99529 1.21295 0.96374 0.96930 0.98352 1.21016 0.99471 0.92051 0.99890 1.23421 0.97922 1.00023 0.95832 1.22575 0.96449 0.93518 1.04211 1.22549 0.82928 0.95549 1.09228 1.24343 0.90187 1.07674 0.92193 1.86662 1.38623 1.91720 1.15720 0.94373 0.81895 0.73683 0.89930 1.83676 1.16357 1.35033 1.71393 0.89027 0.89853 0.87042 0.76353 0.88519 0.90492 0.84881 0.84999 0.85209 0.84908 0.90342 0.88201 0.82479 0.84516 0.77085 1.18016 1.17273 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 0.02 9.89 36.01 0.36 0.38 16 2 C 0.10 0.15 7.37 -34.97 -0.26 -0.11 16 3 C -0.25 -0.47 6.31 -103.28 -0.65 -1.12 16 4 C 0.60 1.57 7.81 -12.54 -0.10 1.47 16 5 O -0.54 -2.81 14.44 5.27 0.08 -2.74 16 6 N -0.71 -0.10 5.26 -54.10 -0.28 -0.39 16 7 C 0.12 -0.05 4.33 -67.12 -0.29 -0.34 16 8 H 0.11 0.09 7.46 -51.93 -0.39 -0.30 16 9 C -0.14 0.11 7.25 -25.92 -0.19 -0.07 16 10 C -0.08 0.07 3.64 -90.96 -0.33 -0.26 16 11 H 0.10 -0.06 6.57 -51.93 -0.34 -0.40 16 12 C -0.06 -0.01 5.29 -104.59 -0.55 -0.56 16 13 C -0.03 -0.03 6.31 -39.50 -0.25 -0.28 16 14 Cl -0.07 -0.07 27.15 -51.86 -1.41 -1.48 16 15 C -0.11 -0.03 9.83 -39.55 -0.39 -0.42 16 16 C -0.11 0.07 10.05 -39.59 -0.40 -0.33 16 17 C -0.11 0.10 10.05 -39.58 -0.40 -0.30 16 18 C -0.11 0.08 8.61 -39.59 -0.34 -0.27 16 19 C -0.13 0.20 7.29 -25.91 -0.19 0.01 16 20 C -0.15 -0.06 10.46 -37.45 -0.39 -0.45 16 21 C -0.05 -0.02 6.20 -35.74 -0.22 -0.24 16 22 C -0.03 0.04 2.97 36.00 0.11 0.14 16 23 O -0.52 0.01 12.86 -35.23 -0.45 -0.44 16 24 Si 0.70 -0.85 32.09 -169.99 -5.45 -6.30 16 25 O -0.17 -0.19 8.89 7.67 0.07 -0.12 16 26 H 0.09 -0.08 8.14 -51.93 -0.42 -0.50 16 27 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 28 H 0.11 0.10 6.49 -51.92 -0.34 -0.24 16 29 H 0.40 -0.63 7.87 -40.82 -0.32 -0.95 16 30 H 0.10 -0.15 6.31 -51.93 -0.33 -0.48 16 31 H 0.08 0.02 8.14 -51.93 -0.42 -0.41 16 32 H 0.13 -0.11 8.06 -52.49 -0.42 -0.54 16 33 H 0.13 -0.33 8.06 -52.49 -0.42 -0.75 16 34 H 0.13 -0.36 8.06 -52.49 -0.42 -0.78 16 35 H 0.13 -0.32 6.66 -52.49 -0.35 -0.67 16 36 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 37 H 0.10 -0.21 7.72 -51.93 -0.40 -0.61 16 38 H 0.16 -0.21 7.74 -52.49 -0.41 -0.62 16 39 H 0.14 -0.34 7.96 -51.93 -0.41 -0.76 16 40 H 0.38 -0.99 8.70 45.56 0.40 -0.60 16 41 H -0.26 -0.39 7.11 56.52 0.40 0.02 16 42 H -0.25 -0.33 7.11 56.52 0.40 0.07 16 LS Contribution 368.80 15.07 5.56 5.56 Total: 0.00 -6.88 368.80 -11.43 -18.31 By element: Atomic # 1 Polarization: -4.60 SS G_CDS: -5.04 Total: -9.64 kcal Atomic # 6 Polarization: 1.73 SS G_CDS: -4.48 Total: -2.76 kcal Atomic # 7 Polarization: -0.10 SS G_CDS: -0.28 Total: -0.39 kcal Atomic # 8 Polarization: -2.99 SS G_CDS: -0.31 Total: -3.30 kcal Atomic # 14 Polarization: -0.85 SS G_CDS: -5.45 Total: -6.30 kcal Atomic # 17 Polarization: -0.07 SS G_CDS: -1.41 Total: -1.48 kcal Total LS contribution 5.56 Total: 5.56 kcal Total: -6.88 -11.43 -18.31 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10565092_13308374.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 12.604 kcal (2) G-P(sol) polarization free energy of solvation -6.881 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 5.723 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.428 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.309 kcal (6) G-S(sol) free energy of system = (1) + (5) -5.705 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds