Wall clock time and date at job start Sat Mar 6 2021 13:14:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.36415 * 125.80166 * 2 1 4 4 C 1.47380 * 127.19120 * 0.02562 * 3 2 1 5 5 O 1.21613 * 120.00134 * 359.70922 * 4 3 2 6 6 N 1.34777 * 119.99615 * 179.70612 * 4 3 2 7 7 C 1.46499 * 119.99665 * 179.72401 * 6 4 3 8 8 H 1.08998 * 112.85361 * 336.47110 * 7 6 4 9 9 C 1.53778 * 113.61557 * 107.77998 * 7 6 4 10 10 C 1.53780 * 87.08092 * 89.11527 * 9 7 6 11 11 H 1.09003 * 113.69422 * 270.87401 * 10 9 7 12 12 C 1.50699 * 113.61686 * 139.97970 * 10 9 7 13 13 C 1.38334 * 120.00968 * 142.23059 * 12 10 9 14 14 Cl 1.73602 * 120.00888 * 359.97438 * 13 12 10 15 15 C 1.38375 * 119.97582 * 179.70717 * 13 12 10 16 16 C 1.38196 * 119.98617 * 0.59221 * 15 13 12 17 17 C 1.38268 * 120.01131 * 359.70163 * 16 15 13 18 18 C 1.38218 * 120.02658 * 359.97438 * 17 16 15 19 19 C 1.53783 * 87.08328 * 25.43430 * 10 9 7 20 20 C 1.47022 * 105.61300 * 179.74956 * 3 2 1 21 21 C 1.34177 * 105.95589 * 0.22951 * 20 3 2 22 22 C 1.50695 * 125.43830 * 180.02562 * 21 20 3 23 23 O 1.42907 * 109.46757 * 299.99107 * 22 21 20 24 24 Si 1.86294 * 109.47119 * 179.97438 * 22 21 20 25 25 O 1.33645 * 125.80015 * 180.13654 * 2 1 3 26 26 H 1.09003 * 109.46926 * 89.99946 * 1 2 3 27 27 H 1.08997 * 109.47407 * 210.00104 * 1 2 3 28 28 H 1.09008 * 109.47214 * 330.00423 * 1 2 3 29 29 H 0.97001 * 120.00485 * 0.02562 * 6 4 3 30 30 H 1.08998 * 113.61596 * 203.65958 * 9 7 6 31 31 H 1.08998 * 113.61243 * 334.56847 * 9 7 6 32 32 H 1.08000 * 120.00381 * 180.27322 * 15 13 12 33 33 H 1.07999 * 119.99676 * 179.72919 * 16 15 13 34 34 H 1.07998 * 119.98297 * 179.97438 * 17 16 15 35 35 H 1.07999 * 119.99268 * 180.02562 * 18 17 16 36 36 H 1.09000 * 113.61551 * 220.02042 * 19 10 9 37 37 H 1.09004 * 113.61245 * 89.11513 * 19 10 9 38 38 H 1.07997 * 127.01982 * 180.24072 * 20 3 2 39 39 H 1.08998 * 109.47759 * 59.99081 * 22 21 20 40 40 H 0.96687 * 114.00469 * 300.00226 * 23 22 21 41 41 H 1.48499 * 110.00254 * 58.68010 * 24 22 21 42 42 H 1.48507 * 109.99796 * 179.97438 * 24 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3050 1.1064 0.0000 4 6 1.8739 2.5157 0.0005 5 8 0.6890 2.7892 -0.0043 6 7 2.7930 3.5015 0.0064 7 6 2.3646 4.9024 0.0008 8 1 1.3634 5.0373 -0.4084 9 6 2.5850 5.6194 1.3433 10 6 3.9849 5.9899 0.8258 11 1 4.7478 5.2458 1.0550 12 6 4.4089 7.3915 1.1821 13 6 5.7241 7.6507 1.5237 14 17 6.8865 6.3615 1.5426 15 6 6.1139 8.9390 1.8449 16 6 5.1867 9.9636 1.8362 17 6 3.8709 9.7028 1.5006 18 6 3.4824 8.4174 1.1731 19 6 3.4077 5.8632 -0.5940 20 6 3.6849 0.5990 0.0062 21 6 3.5859 -0.7391 0.0041 22 6 4.7458 -1.7011 0.0092 23 8 5.5486 -1.4854 -1.1532 24 14 4.1026 -3.4495 0.0045 25 8 2.2888 -1.0839 -0.0026 26 1 -0.3633 0.0000 -1.0277 27 1 -0.3634 -0.8899 0.5138 28 1 -0.3634 0.8901 0.5138 29 1 3.7382 3.2834 0.0100 30 1 1.9324 6.4798 1.4911 31 1 2.6005 4.9462 2.2004 32 1 7.1416 9.1427 2.1074 33 1 5.4898 10.9684 2.0911 34 1 3.1466 10.5038 1.4943 35 1 2.4546 8.2144 0.9107 36 1 4.0872 5.3869 -1.3007 37 1 2.9799 6.7903 -0.9757 38 1 4.5927 1.1839 0.0115 39 1 5.3488 -1.5386 0.9025 40 1 5.0759 -1.6129 -1.9869 41 1 3.2525 -3.6747 -1.1921 42 1 5.2369 -4.4080 0.0088 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10565092_13308374.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:14:43 Heat of formation + Delta-G solvation = -0.313033 kcal Electronic energy + Delta-G solvation = -27319.807116 eV Core-core repulsion = 23259.978325 eV Total energy + Delta-G solvation = -4059.828792 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 348.096 amu Computer time = 0.91 seconds Orbital eigenvalues (eV) -43.78863 -41.58716 -40.29569 -38.82204 -38.17135 -37.42345 -34.82976 -33.99659 -33.10727 -31.74521 -31.67308 -29.41231 -26.74909 -26.69504 -25.66129 -24.38465 -23.65072 -22.75754 -22.16232 -20.86754 -20.03153 -19.05465 -18.37746 -17.92862 -17.73850 -17.10344 -16.81342 -16.63322 -16.34454 -16.06271 -15.90725 -15.72546 -15.14059 -15.04470 -14.78436 -14.75862 -14.50037 -14.22962 -14.11720 -13.93031 -13.84121 -13.52838 -13.38616 -12.97462 -12.93162 -12.83565 -12.69885 -12.48920 -12.19009 -12.16012 -11.78072 -11.54191 -11.28293 -11.18494 -10.97493 -10.75662 -10.15809 -9.84251 -9.60648 -9.58193 -4.94861 0.17157 0.21128 0.28204 0.79711 1.15969 1.16691 1.40854 1.68885 1.90419 2.08435 2.20564 2.62468 3.15090 3.36918 3.39354 3.58396 3.62980 3.72146 3.75606 3.85682 3.94371 4.09673 4.10266 4.16189 4.37482 4.38504 4.39530 4.45397 4.58786 4.60090 4.65446 4.71029 4.74258 4.75675 4.85122 4.88747 4.96910 5.00326 5.09767 5.15326 5.20494 5.29414 5.41731 5.48825 5.58582 5.86269 5.86925 6.32383 6.43856 7.11898 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.085 4.085 2 C 0.088 3.912 3 C -0.270 4.270 4 C 0.593 3.407 5 O -0.570 6.570 6 N -0.697 5.697 7 C 0.119 3.881 8 H 0.096 0.904 9 C -0.137 4.137 10 C -0.077 4.077 11 H 0.101 0.899 12 C -0.070 4.070 13 C -0.051 4.051 14 Cl -0.077 7.077 15 C -0.122 4.122 16 C -0.117 4.117 17 C -0.115 4.115 18 C -0.111 4.111 19 C -0.123 4.123 20 C -0.149 4.149 21 C -0.057 4.057 22 C -0.034 4.034 23 O -0.534 6.534 24 Si 0.772 3.228 25 O -0.171 6.171 26 H 0.096 0.904 27 H 0.102 0.898 28 H 0.098 0.902 29 H 0.410 0.590 30 H 0.106 0.894 31 H 0.066 0.934 32 H 0.138 0.862 33 H 0.149 0.851 34 H 0.150 0.850 35 H 0.149 0.851 36 H 0.081 0.919 37 H 0.109 0.891 38 H 0.174 0.826 39 H 0.156 0.844 40 H 0.390 0.610 41 H -0.294 1.294 42 H -0.282 1.282 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.186 1.536 1.279 2.008 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.141 4.141 2 C 0.034 3.966 3 C -0.274 4.274 4 C 0.382 3.618 5 O -0.451 6.451 6 N -0.347 5.347 7 C 0.013 3.987 8 H 0.114 0.886 9 C -0.175 4.175 10 C -0.095 4.095 11 H 0.119 0.881 12 C -0.071 4.071 13 C -0.077 4.077 14 Cl -0.048 7.048 15 C -0.140 4.140 16 C -0.135 4.135 17 C -0.133 4.133 18 C -0.129 4.129 19 C -0.161 4.161 20 C -0.168 4.168 21 C -0.105 4.105 22 C -0.143 4.143 23 O -0.342 6.342 24 Si 0.676 3.324 25 O -0.068 6.068 26 H 0.115 0.885 27 H 0.120 0.880 28 H 0.117 0.883 29 H 0.247 0.753 30 H 0.125 0.875 31 H 0.084 0.916 32 H 0.156 0.844 33 H 0.167 0.833 34 H 0.167 0.833 35 H 0.167 0.833 36 H 0.099 0.901 37 H 0.127 0.873 38 H 0.191 0.809 39 H 0.174 0.826 40 H 0.240 0.760 41 H -0.221 1.221 42 H -0.209 1.209 Dipole moment (debyes) X Y Z Total from point charges -0.554 0.686 1.295 1.566 hybrid contribution 1.057 0.468 -1.085 1.585 sum 0.503 1.153 0.210 1.276 Atomic orbital electron populations 1.20723 0.82462 1.05787 1.05127 1.23244 0.94807 0.82928 0.95602 1.21197 0.94197 0.93485 1.18563 1.17331 0.85180 0.84319 0.74974 1.90753 1.17762 1.84466 1.52165 1.45393 1.09894 1.05037 1.74395 1.21858 0.99507 0.79728 0.97561 0.88579 1.23549 0.95844 1.00885 0.97247 1.21672 0.97490 0.92943 0.97394 0.88110 1.19706 0.91397 0.96583 0.99401 1.21054 0.90720 0.89963 1.06007 1.98361 1.58801 1.50440 1.97173 1.21298 1.01429 0.91009 1.00292 1.21451 0.93171 0.99764 0.99136 1.21604 0.96702 0.97437 0.97573 1.21264 1.00083 0.91999 0.99542 1.23381 0.97271 0.99926 0.95528 1.22766 0.96376 0.93711 1.03927 1.22822 0.82888 0.95873 1.08913 1.24510 0.89971 1.07133 0.92685 1.86640 1.39310 1.91732 1.16511 0.93508 0.78903 0.72053 0.87960 1.83677 1.16742 1.34981 1.71411 0.88531 0.87969 0.88335 0.75309 0.87532 0.91567 0.84378 0.83297 0.83269 0.83344 0.90081 0.87283 0.80880 0.82642 0.75984 1.22071 1.20902 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.02 9.89 71.24 0.70 0.69 16 2 C 0.09 0.31 7.37 25.26 0.19 0.50 16 3 C -0.27 -1.16 6.31 -18.99 -0.12 -1.28 16 4 C 0.59 3.70 7.81 86.65 0.68 4.38 16 5 O -0.57 -6.83 14.44 -4.07 -0.06 -6.89 16 6 N -0.70 -0.57 5.26 -443.34 -2.33 -2.90 16 7 C 0.12 -0.04 4.33 45.52 0.20 0.15 16 8 H 0.10 0.24 7.46 -2.39 -0.02 0.23 16 9 C -0.14 0.20 7.25 31.12 0.23 0.42 16 10 C -0.08 0.13 3.64 -11.01 -0.04 0.09 16 11 H 0.10 -0.09 6.57 -2.39 -0.02 -0.11 16 12 C -0.07 -0.01 5.29 -19.84 -0.10 -0.12 16 13 C -0.05 -0.11 6.31 22.33 0.14 0.03 16 14 Cl -0.08 -0.20 27.15 -2.72 -0.07 -0.28 16 15 C -0.12 -0.08 9.83 22.29 0.22 0.14 16 16 C -0.12 0.22 10.05 22.27 0.22 0.44 16 17 C -0.12 0.33 10.05 22.27 0.22 0.55 16 18 C -0.11 0.25 8.61 22.27 0.19 0.44 16 19 C -0.12 0.41 7.29 31.12 0.23 0.63 16 20 C -0.15 -0.09 10.46 23.65 0.25 0.15 16 21 C -0.06 -0.02 6.20 24.76 0.15 0.14 16 22 C -0.03 0.09 2.97 71.23 0.21 0.30 16 23 O -0.53 0.31 12.86 -148.98 -1.92 -1.61 16 24 Si 0.77 -1.77 32.09 68.60 2.20 0.43 16 25 O -0.17 -0.40 8.89 4.52 0.04 -0.36 16 26 H 0.10 -0.10 8.14 -2.39 -0.02 -0.12 16 27 H 0.10 -0.42 8.14 -2.39 -0.02 -0.44 16 28 H 0.10 0.32 6.49 -2.38 -0.02 0.30 16 29 H 0.41 -1.23 7.87 -92.71 -0.73 -1.96 16 30 H 0.11 -0.38 6.31 -2.39 -0.02 -0.39 16 31 H 0.07 0.07 8.14 -2.39 -0.02 0.05 16 32 H 0.14 -0.18 8.06 -2.91 -0.02 -0.21 16 33 H 0.15 -0.90 8.06 -2.91 -0.02 -0.92 16 34 H 0.15 -1.08 8.06 -2.91 -0.02 -1.10 16 35 H 0.15 -0.90 6.66 -2.91 -0.02 -0.91 16 36 H 0.08 -0.28 8.14 -2.39 -0.02 -0.30 16 37 H 0.11 -0.53 7.72 -2.39 -0.02 -0.55 16 38 H 0.17 -0.60 7.74 -2.91 -0.02 -0.62 16 39 H 0.16 -1.01 7.96 -2.39 -0.02 -1.03 16 40 H 0.39 -2.10 8.70 -74.07 -0.64 -2.75 16 41 H -0.29 -1.18 7.11 99.48 0.71 -0.47 16 42 H -0.28 -0.95 7.11 99.48 0.71 -0.24 16 Total: 0.00 -16.65 368.80 1.17 -15.48 By element: Atomic # 1 Polarization: -11.30 SS G_CDS: -0.25 Total: -11.55 kcal Atomic # 6 Polarization: 4.10 SS G_CDS: 3.56 Total: 7.67 kcal Atomic # 7 Polarization: -0.57 SS G_CDS: -2.33 Total: -2.90 kcal Atomic # 8 Polarization: -6.92 SS G_CDS: -1.94 Total: -8.85 kcal Atomic # 14 Polarization: -1.77 SS G_CDS: 2.20 Total: 0.43 kcal Atomic # 17 Polarization: -0.20 SS G_CDS: -0.07 Total: -0.28 kcal Total: -16.65 1.17 -15.48 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10565092_13308374.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 15.165 kcal (2) G-P(sol) polarization free energy of solvation -16.651 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -1.486 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.173 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.478 kcal (6) G-S(sol) free energy of system = (1) + (5) -0.313 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.91 seconds