Wall clock time and date at job start Sat Mar 6 2021 13:14:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86293 * 109.47228 * 2 1 4 4 C 1.50700 * 109.47022 * 239.99914 * 2 1 3 5 5 C 1.33738 * 125.12173 * 300.02463 * 4 2 1 6 6 C 1.37795 * 115.08569 * 179.97438 * 5 4 2 7 7 C 1.34985 * 114.70296 * 0.02562 * 6 5 4 8 8 C 1.47560 * 125.28159 * 180.26510 * 7 6 5 9 9 C 1.39817 * 119.99444 * 359.44263 * 8 7 6 10 10 C 1.36565 * 120.00060 * 179.72295 * 9 8 7 11 11 C 1.39837 * 119.99153 * 0.53493 * 10 9 8 12 12 C 1.47566 * 119.99616 * 179.72304 * 11 10 9 13 13 O 1.21596 * 119.99948 * 180.02562 * 12 11 10 14 14 N 1.34777 * 120.00277 * 0.02562 * 12 11 10 15 15 C 1.46495 * 120.00110 * 180.02562 * 14 12 11 16 16 H 1.09007 * 112.85092 * 336.19258 * 15 14 12 17 17 C 1.53781 * 113.61565 * 107.50284 * 15 14 12 18 18 C 1.53777 * 87.07948 * 89.11664 * 17 15 14 19 19 H 1.08997 * 113.61798 * 270.88247 * 18 17 15 20 20 C 1.50703 * 113.69366 * 139.99225 * 18 17 15 21 21 C 1.38322 * 120.00925 * 142.46254 * 20 18 17 22 22 Cl 1.73599 * 120.01526 * 359.95569 * 21 20 18 23 23 C 1.38376 * 119.97336 * 179.97438 * 21 20 18 24 24 C 1.38184 * 119.98747 * 0.02562 * 23 21 20 25 25 C 1.38264 * 120.01604 * 359.97438 * 24 23 21 26 26 C 1.38225 * 120.02215 * 359.75501 * 25 24 23 27 27 C 1.53777 * 113.61440 * 205.00319 * 15 14 12 28 28 C 1.39823 * 120.00280 * 359.73481 * 11 10 9 29 29 C 1.36564 * 119.99643 * 0.02562 * 28 11 10 30 30 S 1.75859 * 125.11793 * 120.02263 * 4 2 1 31 31 H 0.96702 * 114.00362 * 59.99960 * 1 2 3 32 32 H 1.08995 * 109.47417 * 120.00098 * 2 1 3 33 33 H 1.48499 * 110.00246 * 298.68208 * 3 2 1 34 34 H 1.48502 * 110.00322 * 60.00107 * 3 2 1 35 35 H 1.08001 * 122.45839 * 359.97438 * 5 4 2 36 36 H 1.07998 * 122.65512 * 180.02562 * 6 5 4 37 37 H 1.08003 * 120.00622 * 359.97438 * 9 8 7 38 38 H 1.07994 * 120.00664 * 180.26959 * 10 9 8 39 39 H 0.97000 * 119.99735 * 0.02562 * 14 12 11 40 40 H 1.08999 * 113.61294 * 203.66616 * 17 15 14 41 41 H 1.08999 * 113.61483 * 334.56999 * 17 15 14 42 42 H 1.08006 * 120.00852 * 179.97438 * 23 21 20 43 43 H 1.08000 * 119.99768 * 179.97438 * 24 23 21 44 44 H 1.08001 * 119.99112 * 179.97438 * 25 24 23 45 45 H 1.07998 * 119.99168 * 180.27319 * 26 25 24 46 46 H 1.09001 * 113.61938 * 25.42927 * 27 15 14 47 47 H 1.09003 * 113.61592 * 156.24899 * 27 15 14 48 48 H 1.08007 * 120.00556 * 179.97438 * 28 11 10 49 49 H 1.08004 * 119.99832 * 179.97438 * 29 28 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 1.6717 -1.9846 -1.5431 6 6 2.2368 -2.4240 -2.7205 7 6 2.9668 -1.4971 -3.3763 8 6 3.6673 -1.7135 -4.6569 9 6 3.6132 -2.9637 -5.2806 10 6 4.2567 -3.1625 -6.4686 11 6 4.9790 -2.1189 -7.0555 12 6 5.6795 -2.3354 -8.3361 13 8 6.3080 -1.4281 -8.8463 14 7 5.6227 -3.5388 -8.9403 15 6 6.3185 -3.7539 -10.2114 16 1 6.4845 -2.8296 -10.7648 17 6 7.5743 -4.6325 -10.0852 18 6 6.6555 -5.8426 -10.3223 19 1 6.2299 -6.2537 -9.4069 20 6 7.2613 -6.8980 -11.2112 21 6 7.0361 -8.2371 -10.9478 22 17 6.0564 -8.7026 -9.5923 23 6 7.5923 -9.2056 -11.7648 24 6 8.3728 -8.8345 -12.8430 25 6 8.5977 -7.4958 -13.1059 26 6 8.0377 -6.5279 -12.2934 27 6 5.7113 -4.8811 -11.0631 28 6 5.0377 -0.8703 -6.4289 29 6 4.3901 -0.6703 -5.2433 30 16 2.9470 0.0112 -2.4715 31 1 -0.3934 0.4417 -0.7650 32 1 1.7923 -0.5138 0.8899 33 1 1.5879 2.4585 -1.2242 34 1 1.5615 2.4679 1.2085 35 1 1.0637 -2.6224 -0.9186 36 1 2.1060 -3.4305 -3.0897 37 1 3.0591 -3.7711 -4.8249 38 1 4.2114 -4.1269 -6.9525 39 1 5.1210 -4.2625 -8.5335 40 1 8.3006 -4.4730 -10.8821 41 1 8.0230 -4.6129 -9.0920 42 1 7.4171 -10.2513 -11.5593 43 1 8.8073 -9.5902 -13.4806 44 1 9.2081 -7.2063 -13.9485 45 1 8.2101 -5.4823 -12.5019 46 1 4.6559 -5.0623 -10.8593 47 1 5.9270 -4.7888 -12.1275 48 1 5.5959 -0.0643 -6.8820 49 1 4.4358 0.2940 -4.7591 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10565092_13308390.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:14:46 Heat of formation + Delta-G solvation = 49.478814 kcal Electronic energy + Delta-G solvation = -33299.732727 eV Core-core repulsion = 28697.691569 eV Total energy + Delta-G solvation = -4602.041157 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 426.084 amu Computer time = 1.74 seconds Orbital eigenvalues (eV) -41.81088 -40.90960 -39.93973 -39.18831 -38.67439 -37.47602 -37.40339 -34.88337 -33.45051 -32.33986 -31.68210 -31.65861 -30.41669 -27.43376 -26.73535 -26.19801 -24.76113 -24.01786 -23.72031 -23.39201 -22.58926 -21.82943 -20.29168 -20.22700 -19.21904 -18.73973 -18.17793 -17.70342 -17.23158 -16.74111 -16.62290 -16.41311 -16.32826 -16.18165 -16.10198 -16.00586 -15.56694 -15.14055 -15.11424 -14.85366 -14.76792 -14.64041 -14.45366 -14.38684 -14.21166 -13.80759 -13.63286 -13.57976 -13.41060 -13.24434 -13.11349 -12.94672 -12.68399 -12.55120 -12.47033 -12.42288 -12.15667 -12.09199 -11.77252 -11.53379 -11.51991 -11.26230 -11.14598 -10.88219 -10.65655 -10.19968 -10.16831 -9.82885 -9.57674 -9.55205 -9.03713 -5.08828 -0.89910 0.18697 0.24467 0.29437 0.33067 0.38820 0.76141 1.17455 1.20102 1.52194 1.55048 1.84273 1.94443 1.99507 2.63563 2.81617 3.30145 3.39270 3.41318 3.59157 3.62946 3.65845 3.72074 3.73757 3.83513 3.86627 3.95598 4.10852 4.16589 4.19584 4.30558 4.39599 4.40649 4.40789 4.51865 4.55028 4.60564 4.63255 4.72420 4.75678 4.81941 4.89487 4.91871 4.98064 5.01033 5.01479 5.09601 5.11908 5.21908 5.28291 5.30500 5.31525 5.41447 5.47799 5.50043 5.58260 5.72505 5.87276 6.36992 6.41301 7.09140 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.539 6.539 2 C -0.034 4.034 3 Si 0.709 3.291 4 C -0.218 4.218 5 C -0.110 4.110 6 C -0.117 4.117 7 C -0.160 4.160 8 C 0.007 3.993 9 C -0.109 4.109 10 C -0.069 4.069 11 C -0.150 4.150 12 C 0.561 3.439 13 O -0.577 6.577 14 N -0.696 5.696 15 C 0.116 3.884 16 H 0.092 0.908 17 C -0.139 4.139 18 C -0.076 4.076 19 H 0.105 0.895 20 C -0.070 4.070 21 C -0.049 4.049 22 Cl -0.074 7.074 23 C -0.122 4.122 24 C -0.117 4.117 25 C -0.116 4.116 26 C -0.112 4.112 27 C -0.122 4.122 28 C -0.062 4.062 29 C -0.128 4.128 30 S 0.124 5.876 31 H 0.388 0.612 32 H 0.140 0.860 33 H -0.266 1.266 34 H -0.272 1.272 35 H 0.154 0.846 36 H 0.165 0.835 37 H 0.159 0.841 38 H 0.159 0.841 39 H 0.413 0.587 40 H 0.104 0.896 41 H 0.066 0.934 42 H 0.139 0.861 43 H 0.148 0.852 44 H 0.148 0.852 45 H 0.148 0.852 46 H 0.085 0.915 47 H 0.107 0.893 48 H 0.131 0.869 49 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.526 -4.279 -1.196 4.474 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.347 6.347 2 C -0.146 4.146 3 Si 0.611 3.389 4 C -0.336 4.336 5 C -0.141 4.141 6 C -0.147 4.147 7 C -0.277 4.277 8 C 0.005 3.995 9 C -0.129 4.129 10 C -0.087 4.087 11 C -0.154 4.154 12 C 0.350 3.650 13 O -0.458 6.458 14 N -0.347 5.347 15 C 0.010 3.990 16 H 0.111 0.889 17 C -0.177 4.177 18 C -0.094 4.094 19 H 0.123 0.877 20 C -0.070 4.070 21 C -0.076 4.076 22 Cl -0.045 7.045 23 C -0.140 4.140 24 C -0.136 4.136 25 C -0.134 4.134 26 C -0.130 4.130 27 C -0.160 4.160 28 C -0.081 4.081 29 C -0.146 4.146 30 S 0.392 5.608 31 H 0.237 0.763 32 H 0.157 0.843 33 H -0.192 1.192 34 H -0.197 1.197 35 H 0.172 0.828 36 H 0.183 0.817 37 H 0.177 0.823 38 H 0.176 0.824 39 H 0.252 0.748 40 H 0.122 0.878 41 H 0.085 0.915 42 H 0.157 0.843 43 H 0.166 0.834 44 H 0.166 0.834 45 H 0.165 0.835 46 H 0.104 0.896 47 H 0.126 0.874 48 H 0.149 0.851 49 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges 1.380 -1.693 -1.076 2.435 hybrid contribution -1.861 -1.744 0.080 2.552 sum -0.481 -3.437 -0.995 3.611 Atomic orbital electron populations 1.86599 1.17801 1.80195 1.50126 1.24458 0.83370 1.10096 0.96661 0.94468 0.91030 0.73866 0.79502 1.25101 1.06997 0.99231 1.02246 1.20178 1.01296 0.94920 0.97676 1.20634 0.97799 1.01301 0.94978 1.23173 1.06675 0.98205 0.99643 1.18458 0.95116 0.94576 0.91350 1.21178 1.00005 0.96449 0.95247 1.21235 0.94005 0.98578 0.94923 1.20005 1.03131 0.96249 0.96003 1.18454 0.79642 0.82333 0.84598 1.90782 1.44473 1.43771 1.66727 1.45493 1.52938 1.12967 1.23320 1.21874 0.93490 0.98800 0.84799 0.88941 1.23554 0.96769 0.94119 1.03261 1.21689 0.97350 0.92127 0.98274 0.87697 1.19692 0.98416 0.91950 0.96972 1.21030 0.99516 0.94399 0.92646 1.98359 1.69507 1.92187 1.44494 1.21298 0.97896 0.99671 0.95158 1.21439 0.97832 0.97340 0.96940 1.21595 0.99079 0.92825 0.99926 1.21259 0.96714 1.01120 0.93866 1.23374 0.99905 0.92595 1.00113 1.20952 0.96546 0.96498 0.94118 1.21040 0.98268 0.99330 0.96011 1.84201 1.48862 1.12881 1.14871 0.76279 0.84296 1.19171 1.19699 0.82842 0.81738 0.82339 0.82376 0.74840 0.87767 0.91474 0.84344 0.83390 0.83430 0.83487 0.89593 0.87440 0.85125 0.84700 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.55 12.86 -148.98 -1.92 -2.47 16 2 C -0.03 0.05 2.96 71.24 0.21 0.26 16 3 Si 0.71 -0.91 30.96 68.60 2.12 1.22 16 4 C -0.22 0.17 5.73 24.66 0.14 0.32 16 5 C -0.11 0.15 10.00 21.14 0.21 0.36 16 6 C -0.12 0.24 9.64 21.42 0.21 0.45 16 7 C -0.16 -0.01 6.37 23.98 0.15 0.14 16 8 C 0.01 0.00 5.88 -20.05 -0.12 -0.12 16 9 C -0.11 0.36 9.48 22.26 0.21 0.57 16 10 C -0.07 0.24 9.48 22.27 0.21 0.45 16 11 C -0.15 -0.37 5.88 -20.05 -0.12 -0.48 16 12 C 0.56 3.03 7.76 86.70 0.67 3.70 16 13 O -0.58 -7.95 15.93 -4.02 -0.06 -8.01 16 14 N -0.70 0.78 5.21 -443.17 -2.31 -1.53 16 15 C 0.12 -0.14 4.32 45.52 0.20 0.06 16 16 H 0.09 0.24 7.46 -2.38 -0.02 0.22 16 17 C -0.14 0.30 7.26 31.12 0.23 0.52 16 18 C -0.08 0.24 3.64 -11.01 -0.04 0.20 16 19 H 0.10 -0.33 6.57 -2.39 -0.02 -0.35 16 20 C -0.07 0.06 5.29 -19.84 -0.11 -0.05 16 21 C -0.05 -0.05 6.31 22.32 0.14 0.09 16 22 Cl -0.07 -0.07 27.16 -2.72 -0.07 -0.14 16 23 C -0.12 0.02 9.83 22.29 0.22 0.24 16 24 C -0.12 0.28 10.04 22.26 0.22 0.50 16 25 C -0.12 0.37 10.05 22.27 0.22 0.59 16 26 C -0.11 0.30 8.60 22.27 0.19 0.49 16 27 C -0.12 0.57 7.29 31.12 0.23 0.80 16 28 C -0.06 -0.25 9.53 22.26 0.21 -0.03 16 29 C -0.13 -0.24 9.54 22.26 0.21 -0.02 16 30 S 0.12 -0.03 19.46 -56.49 -1.10 -1.13 16 31 H 0.39 -1.60 8.70 -74.06 -0.64 -2.24 16 32 H 0.14 -0.54 7.96 -2.39 -0.02 -0.56 16 33 H -0.27 -0.76 7.11 99.48 0.71 -0.06 16 34 H -0.27 -1.31 7.11 99.48 0.71 -0.60 16 35 H 0.15 -0.49 8.06 -2.91 -0.02 -0.51 16 36 H 0.17 -1.13 6.88 -2.91 -0.02 -1.15 16 37 H 0.16 -1.36 6.74 -2.91 -0.02 -1.38 16 38 H 0.16 -1.59 6.38 -2.91 -0.02 -1.60 16 39 H 0.41 -2.77 6.71 -92.71 -0.62 -3.39 16 40 H 0.10 -0.39 6.34 -2.39 -0.02 -0.40 16 41 H 0.07 0.01 8.14 -2.39 -0.02 -0.01 16 42 H 0.14 -0.30 8.06 -2.91 -0.02 -0.33 16 43 H 0.15 -0.94 8.06 -2.91 -0.02 -0.96 16 44 H 0.15 -1.08 8.06 -2.91 -0.02 -1.10 16 45 H 0.15 -0.92 6.68 -2.91 -0.02 -0.94 16 46 H 0.09 -0.49 8.14 -2.39 -0.02 -0.51 16 47 H 0.11 -0.62 7.72 -2.39 -0.02 -0.64 16 48 H 0.13 0.69 7.64 -2.91 -0.02 0.67 16 49 H 0.14 -0.01 7.26 -2.91 -0.02 -0.03 16 Total: 0.00 -19.09 432.23 0.18 -18.91 By element: Atomic # 1 Polarization: -15.67 SS G_CDS: -0.19 Total: -15.87 kcal Atomic # 6 Polarization: 5.31 SS G_CDS: 3.71 Total: 9.02 kcal Atomic # 7 Polarization: 0.78 SS G_CDS: -2.31 Total: -1.53 kcal Atomic # 8 Polarization: -8.50 SS G_CDS: -1.98 Total: -10.48 kcal Atomic # 14 Polarization: -0.91 SS G_CDS: 2.12 Total: 1.22 kcal Atomic # 16 Polarization: -0.03 SS G_CDS: -1.10 Total: -1.13 kcal Atomic # 17 Polarization: -0.07 SS G_CDS: -0.07 Total: -0.14 kcal Total: -19.09 0.18 -18.91 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10565092_13308390.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 68.385 kcal (2) G-P(sol) polarization free energy of solvation -19.086 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 49.299 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.180 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.906 kcal (6) G-S(sol) free energy of system = (1) + (5) 49.479 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.74 seconds