Wall clock time and date at job start Sat Mar 6 2021 13:14:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86301 * 109.47027 * 2 1 4 4 C 1.50698 * 109.47005 * 120.00251 * 2 1 3 5 5 C 1.38052 * 119.80802 * 65.00178 * 4 2 1 6 6 C 1.38704 * 120.08603 * 179.97438 * 5 4 2 7 7 O 1.35658 * 120.14982 * 180.02562 * 6 5 4 8 8 C 1.40143 * 119.70071 * 359.97438 * 6 5 4 9 9 C 1.47535 * 120.19206 * 180.02562 * 8 6 5 10 10 O 1.21593 * 120.00010 * 0.02562 * 9 8 6 11 11 N 1.34773 * 120.00040 * 180.27542 * 9 8 6 12 12 C 1.46500 * 120.00431 * 179.72702 * 11 9 8 13 13 H 1.09006 * 112.84642 * 336.19847 * 12 11 9 14 14 C 1.53774 * 113.61696 * 107.50253 * 12 11 9 15 15 C 1.53786 * 87.08098 * 89.11862 * 14 12 11 16 16 H 1.09000 * 113.61405 * 270.88610 * 15 14 12 17 17 C 1.50698 * 113.61411 * 139.98016 * 15 14 12 18 18 C 1.38335 * 120.00422 * 142.22748 * 17 15 14 19 19 Cl 1.73592 * 120.01320 * 359.97438 * 18 17 15 20 20 C 1.38380 * 119.96976 * 179.69960 * 18 17 15 21 21 C 1.38197 * 119.98542 * 0.60256 * 20 18 17 22 22 C 1.38266 * 120.01337 * 359.69772 * 21 20 18 23 23 C 1.38216 * 120.02516 * 359.97438 * 22 21 20 24 24 C 1.53780 * 113.61736 * 205.00698 * 12 11 9 25 25 C 1.39707 * 119.61420 * 0.28020 * 8 6 5 26 26 C 1.37788 * 119.90717 * 359.44174 * 25 8 6 27 27 H 0.96699 * 113.99946 * 300.00121 * 1 2 3 28 28 H 1.08995 * 109.47316 * 240.00336 * 2 1 3 29 29 H 1.48505 * 109.99875 * 178.68141 * 3 2 1 30 30 H 1.48499 * 110.00120 * 300.00106 * 3 2 1 31 31 H 1.07999 * 119.95669 * 359.97438 * 5 4 2 32 32 H 0.96696 * 113.99590 * 269.97685 * 7 6 5 33 33 H 0.97000 * 120.00112 * 359.73139 * 11 9 8 34 34 H 1.09001 * 113.61556 * 203.66763 * 14 12 11 35 35 H 1.09001 * 113.61597 * 334.57499 * 14 12 11 36 36 H 1.07990 * 120.00366 * 180.27599 * 20 18 17 37 37 H 1.08003 * 119.99115 * 179.72418 * 21 20 18 38 38 H 1.08004 * 119.98205 * 180.02562 * 22 21 20 39 39 H 1.08005 * 119.98695 * 180.02562 * 23 22 21 40 40 H 1.09002 * 113.61835 * 25.42623 * 24 12 11 41 41 H 1.09003 * 113.61714 * 156.33419 * 24 12 11 42 42 H 1.08003 * 120.04231 * 179.70402 * 25 8 6 43 43 H 1.07998 * 119.85095 * 180.25729 * 26 25 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 1.6828 -2.0585 1.3940 6 6 2.1429 -2.7183 2.5240 7 8 1.8998 -4.0431 2.6858 8 6 2.8608 -2.0104 3.4973 9 6 3.3558 -2.7015 4.7031 10 8 3.1415 -3.8888 4.8545 11 7 4.0410 -2.0157 5.6394 12 6 4.5274 -2.7006 6.8396 13 1 3.9572 -3.5995 7.0743 14 6 6.0502 -2.9138 6.8529 15 6 6.1580 -1.5372 7.5300 16 1 6.2420 -0.7096 6.8256 17 6 7.1915 -1.4826 8.6254 18 6 7.9627 -0.3464 8.7927 19 17 7.7407 1.0164 7.7406 20 6 8.9072 -0.2946 9.8027 21 6 9.0881 -1.3824 10.6356 22 6 8.3212 -2.5200 10.4639 23 6 7.3730 -2.5698 9.4595 24 6 4.7268 -1.7657 8.0442 25 6 3.1006 -0.6453 3.3216 26 6 2.6411 -0.0071 2.1902 27 1 -0.3933 0.4417 0.7650 28 1 1.7923 -0.5137 -0.8900 29 1 3.5346 1.7703 0.0321 30 1 1.5614 2.4679 -1.2085 31 1 1.1294 -2.6001 0.6411 32 1 1.0747 -4.2376 3.1510 33 1 4.2122 -1.0686 5.5185 34 1 6.3700 -3.7394 7.4887 35 1 6.4951 -2.9472 5.8584 36 1 9.5064 0.5938 9.9366 37 1 9.8283 -1.3437 11.4211 38 1 8.4627 -3.3697 11.1154 39 1 6.7740 -3.4586 9.3262 40 1 4.1033 -0.8722 8.0115 41 1 4.6848 -2.2774 9.0058 42 1 3.6490 -0.0920 4.0696 43 1 2.8306 1.0473 2.0533 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10565092_13422076.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:14:50 Heat of formation + Delta-G solvation = -28.094653 kcal Electronic energy + Delta-G solvation = -28612.336444 eV Core-core repulsion = 24423.076810 eV Total energy + Delta-G solvation = -4189.259634 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.096 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -41.90103 -41.13788 -39.97472 -38.84979 -38.30301 -37.40032 -37.14256 -34.74370 -32.82615 -31.66292 -31.54741 -31.11800 -27.68490 -26.72947 -26.13310 -23.99029 -23.90873 -23.44817 -22.56441 -21.76007 -20.24216 -19.39294 -18.83381 -18.22230 -18.14018 -17.32434 -16.88285 -16.70496 -16.46696 -16.25294 -16.14471 -15.96384 -15.71245 -15.28608 -15.14572 -14.94129 -14.77028 -14.75146 -14.55890 -14.24455 -13.85004 -13.55140 -13.39534 -13.20306 -12.95813 -12.92837 -12.68188 -12.46676 -12.31043 -12.20786 -12.14843 -11.76353 -11.71474 -11.51031 -11.25019 -10.97027 -10.49211 -10.24787 -10.02703 -9.83629 -9.78257 -9.57436 -4.99872 -0.43196 0.13370 0.18751 0.29304 1.17607 1.27548 1.63630 1.70418 1.98730 1.99820 2.55735 2.63647 3.10642 3.40499 3.42985 3.53696 3.59840 3.65400 3.69882 3.78466 3.87141 3.95846 4.06661 4.11136 4.17195 4.26025 4.36273 4.39727 4.40602 4.57983 4.63735 4.72491 4.74643 4.76065 4.82631 4.91016 4.98208 5.01060 5.01943 5.09829 5.15460 5.23103 5.30369 5.42151 5.50008 5.58048 5.60115 5.87141 6.44341 6.70619 6.74875 7.14150 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.553 6.553 2 C -0.084 4.084 3 Si 0.789 3.211 4 C -0.073 4.073 5 C -0.140 4.140 6 C 0.153 3.847 7 O -0.498 6.498 8 C -0.179 4.179 9 C 0.559 3.441 10 O -0.561 6.561 11 N -0.697 5.697 12 C 0.118 3.882 13 H 0.092 0.908 14 C -0.142 4.142 15 C -0.076 4.076 16 H 0.106 0.894 17 C -0.070 4.070 18 C -0.050 4.050 19 Cl -0.073 7.073 20 C -0.121 4.121 21 C -0.118 4.118 22 C -0.117 4.117 23 C -0.112 4.112 24 C -0.120 4.120 25 C -0.054 4.054 26 C -0.130 4.130 27 H 0.398 0.602 28 H 0.107 0.893 29 H -0.280 1.280 30 H -0.303 1.303 31 H 0.134 0.866 32 H 0.408 0.592 33 H 0.413 0.587 34 H 0.102 0.898 35 H 0.063 0.937 36 H 0.139 0.861 37 H 0.148 0.852 38 H 0.148 0.852 39 H 0.147 0.853 40 H 0.089 0.911 41 H 0.107 0.893 42 H 0.167 0.833 43 H 0.165 0.835 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.201 5.514 5.376 7.704 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.362 6.362 2 C -0.193 4.193 3 Si 0.694 3.306 4 C -0.074 4.074 5 C -0.159 4.159 6 C 0.107 3.893 7 O -0.311 6.311 8 C -0.183 4.183 9 C 0.347 3.653 10 O -0.440 6.440 11 N -0.349 5.349 12 C 0.013 3.987 13 H 0.110 0.890 14 C -0.180 4.180 15 C -0.094 4.094 16 H 0.124 0.876 17 C -0.071 4.071 18 C -0.076 4.076 19 Cl -0.044 7.044 20 C -0.140 4.140 21 C -0.136 4.136 22 C -0.134 4.134 23 C -0.130 4.130 24 C -0.158 4.158 25 C -0.072 4.072 26 C -0.147 4.147 27 H 0.248 0.752 28 H 0.124 0.876 29 H -0.207 1.207 30 H -0.231 1.231 31 H 0.151 0.849 32 H 0.268 0.732 33 H 0.251 0.749 34 H 0.121 0.879 35 H 0.082 0.918 36 H 0.157 0.843 37 H 0.166 0.834 38 H 0.165 0.835 39 H 0.164 0.836 40 H 0.107 0.893 41 H 0.125 0.875 42 H 0.184 0.816 43 H 0.181 0.819 Dipole moment (debyes) X Y Z Total from point charges 0.703 4.985 4.160 6.531 hybrid contribution -0.149 -0.385 -0.387 0.566 sum 0.554 4.601 3.773 5.976 Atomic orbital electron populations 1.86504 1.16860 1.82224 1.50589 1.25394 0.85621 1.11537 0.96721 0.93709 0.77866 0.74040 0.84971 1.20567 0.96497 0.93634 0.96679 1.21339 1.01671 0.94686 0.98193 1.18745 0.94715 0.83277 0.92558 1.84716 1.47204 1.19052 1.80172 1.20431 1.06371 0.95533 0.95961 1.18292 0.77740 0.86247 0.82975 1.90811 1.58433 1.16430 1.78363 1.45476 1.55809 1.13546 1.20086 1.21836 0.94894 0.96941 0.85043 0.89020 1.23573 0.95849 0.97272 1.01321 1.21692 0.93285 0.98998 0.95410 0.87628 1.19701 0.96939 0.92592 0.97819 1.21033 1.00546 0.90035 0.95985 1.98357 1.96590 1.43704 1.65784 1.21301 0.97700 1.00468 0.94537 1.21443 1.00043 0.92650 0.99441 1.21591 0.95108 0.98864 0.97886 1.21254 0.98831 0.98177 0.94747 1.23364 0.94533 1.00191 0.97678 1.21491 0.96392 0.91420 0.97919 1.21224 0.98859 1.01041 0.93557 0.75213 0.87556 1.20664 1.23086 0.84858 0.73222 0.74883 0.87927 0.91836 0.84319 0.83392 0.83465 0.83561 0.89265 0.87506 0.81592 0.81852 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.98 12.83 -148.98 -1.91 -0.93 16 2 C -0.08 0.22 2.79 71.24 0.20 0.42 16 3 Si 0.79 -4.20 29.78 68.60 2.04 -2.16 16 4 C -0.07 0.15 5.36 -19.83 -0.11 0.04 16 5 C -0.14 -0.31 9.60 22.34 0.21 -0.10 16 6 C 0.15 0.77 6.72 22.84 0.15 0.92 16 7 O -0.50 -3.96 11.58 -68.82 -0.80 -4.76 16 8 C -0.18 -0.40 5.89 -20.01 -0.12 -0.52 16 9 C 0.56 2.95 7.76 86.70 0.67 3.62 16 10 O -0.56 -7.69 14.76 16.91 0.25 -7.44 16 11 N -0.70 1.15 5.21 -443.21 -2.31 -1.16 16 12 C 0.12 -0.18 4.32 45.51 0.20 0.02 16 13 H 0.09 0.21 7.46 -2.38 -0.02 0.20 16 14 C -0.14 0.25 7.25 31.12 0.23 0.48 16 15 C -0.08 0.25 3.64 -11.01 -0.04 0.21 16 16 H 0.11 -0.37 6.57 -2.39 -0.02 -0.39 16 17 C -0.07 0.06 5.29 -19.84 -0.10 -0.04 16 18 C -0.05 -0.05 6.31 22.33 0.14 0.10 16 19 Cl -0.07 -0.04 27.16 -2.72 -0.07 -0.12 16 20 C -0.12 0.03 9.83 22.29 0.22 0.25 16 21 C -0.12 0.28 10.05 22.27 0.22 0.50 16 22 C -0.12 0.36 10.05 22.27 0.22 0.59 16 23 C -0.11 0.29 8.61 22.26 0.19 0.48 16 24 C -0.12 0.64 7.29 31.12 0.23 0.86 16 25 C -0.05 0.27 9.54 22.52 0.21 0.48 16 26 C -0.13 0.76 8.64 22.24 0.19 0.95 16 27 H 0.40 -4.17 8.70 -74.06 -0.64 -4.82 16 28 H 0.11 -0.07 7.96 -2.39 -0.02 -0.09 16 29 H -0.28 0.30 7.11 99.48 0.71 1.01 16 30 H -0.30 -0.95 7.11 99.48 0.71 -0.25 16 31 H 0.13 0.36 8.06 -2.91 -0.02 0.34 16 32 H 0.41 0.30 9.06 -74.06 -0.67 -0.37 16 33 H 0.41 -3.15 6.73 -92.71 -0.62 -3.78 16 34 H 0.10 -0.32 6.31 -2.39 -0.02 -0.33 16 35 H 0.06 0.07 8.14 -2.39 -0.02 0.05 16 36 H 0.14 -0.32 8.06 -2.92 -0.02 -0.35 16 37 H 0.15 -0.94 8.06 -2.91 -0.02 -0.96 16 38 H 0.15 -1.06 8.06 -2.91 -0.02 -1.08 16 39 H 0.15 -0.88 6.66 -2.91 -0.02 -0.90 16 40 H 0.09 -0.62 8.14 -2.39 -0.02 -0.64 16 41 H 0.11 -0.67 7.72 -2.39 -0.02 -0.69 16 42 H 0.17 -2.02 6.40 -2.91 -0.02 -2.04 16 43 H 0.16 -1.92 4.88 -2.91 -0.01 -1.93 16 Total: 0.00 -23.64 371.45 -0.67 -24.31 By element: Atomic # 1 Polarization: -16.21 SS G_CDS: -0.80 Total: -17.01 kcal Atomic # 6 Polarization: 6.34 SS G_CDS: 2.93 Total: 9.27 kcal Atomic # 7 Polarization: 1.15 SS G_CDS: -2.31 Total: -1.16 kcal Atomic # 8 Polarization: -10.68 SS G_CDS: -2.46 Total: -13.13 kcal Atomic # 14 Polarization: -4.20 SS G_CDS: 2.04 Total: -2.16 kcal Atomic # 17 Polarization: -0.04 SS G_CDS: -0.07 Total: -0.12 kcal Total: -23.64 -0.67 -24.31 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10565092_13422076.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -3.782 kcal (2) G-P(sol) polarization free energy of solvation -23.643 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -27.425 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.669 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.313 kcal (6) G-S(sol) free energy of system = (1) + (5) -28.095 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds