Wall clock time and date at job start Sat Mar 6 2021 13:14:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.37793 * 119.84880 * 2 1 4 4 C 1.39701 * 119.90533 * 180.29451 * 3 2 1 5 5 C 1.47538 * 120.19030 * 179.69684 * 4 3 2 6 6 O 1.21591 * 120.00247 * 179.72714 * 5 4 3 7 7 N 1.34781 * 120.00142 * 359.73406 * 5 4 3 8 8 C 1.46496 * 120.00029 * 179.97438 * 7 5 4 9 9 H 1.09000 * 112.85173 * 23.80951 * 8 7 5 10 10 C 1.53785 * 113.61306 * 154.99810 * 8 7 5 11 11 C 1.53781 * 87.07859 * 89.11517 * 10 8 7 12 12 H 1.08996 * 113.62112 * 270.79750 * 11 10 8 13 13 C 1.50707 * 113.61241 * 139.98079 * 11 10 8 14 14 C 1.38327 * 120.00566 * 121.76220 * 13 11 10 15 15 Cl 1.73604 * 120.01716 * 0.04771 * 14 13 11 16 16 C 1.38373 * 119.97419 * 180.25713 * 14 13 11 17 17 C 1.38195 * 119.98516 * 359.48757 * 16 14 13 18 18 C 1.38265 * 120.01144 * 0.28295 * 17 16 14 19 19 C 1.38215 * 120.02666 * 359.97122 * 18 17 16 20 20 C 1.53778 * 87.17504 * 25.39289 * 11 10 8 21 21 C 1.40134 * 119.62050 * 359.43460 * 4 3 2 22 22 O 1.35654 * 120.15220 * 180.29509 * 21 4 3 23 23 C 1.38709 * 119.69695 * 0.26952 * 21 4 3 24 24 C 1.50704 * 119.95467 * 179.97438 * 23 21 4 25 25 O 1.42895 * 109.47036 * 284.99725 * 24 23 21 26 26 Si 1.86308 * 109.46865 * 165.00038 * 24 23 21 27 27 C 1.38056 * 120.08674 * 0.02562 * 23 21 4 28 28 H 1.08996 * 109.47054 * 270.29722 * 1 2 3 29 29 H 1.09001 * 109.47215 * 30.30106 * 1 2 3 30 30 H 1.08999 * 109.46815 * 150.29770 * 1 2 3 31 31 H 1.07999 * 120.04425 * 0.02614 * 3 2 1 32 32 H 0.96998 * 119.99630 * 359.97438 * 7 5 4 33 33 H 1.09003 * 113.61250 * 334.57704 * 10 8 7 34 34 H 1.08991 * 113.69622 * 203.67787 * 10 8 7 35 35 H 1.08002 * 120.01187 * 179.76954 * 16 14 13 36 36 H 1.07999 * 119.99516 * 180.25502 * 17 16 14 37 37 H 1.08007 * 119.98705 * 179.97438 * 18 17 16 38 38 H 1.08000 * 119.99310 * 180.02562 * 19 18 17 39 39 H 1.09006 * 113.61719 * 89.15105 * 20 11 10 40 40 H 1.08998 * 113.61844 * 220.05995 * 20 11 10 41 41 H 0.96700 * 114.00174 * 89.99673 * 22 21 4 42 42 H 1.09000 * 109.47417 * 45.00190 * 24 23 21 43 43 H 0.96696 * 114.00240 * 299.99945 * 25 24 23 44 44 H 1.48500 * 109.99940 * 180.02562 * 26 24 23 45 45 H 1.48506 * 109.99634 * 301.31745 * 26 24 23 46 46 H 1.07997 * 119.80386 * 180.02562 * 27 23 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1928 1.1951 0.0000 4 6 3.5898 1.1965 -0.0062 5 6 4.3305 2.4725 -0.0130 6 8 5.5464 2.4698 -0.0134 7 7 3.6593 3.6413 -0.0186 8 6 4.3947 4.9083 -0.0248 9 1 5.4020 4.8111 -0.4299 10 6 3.5995 6.0792 -0.6260 11 6 3.0604 6.3376 0.7909 12 1 2.1476 5.7869 1.0180 13 6 2.9644 7.7999 1.1429 14 6 1.7467 8.3450 1.5080 15 17 0.3287 7.3450 1.5620 16 6 1.6583 9.6888 1.8259 17 6 2.7886 10.4831 1.7888 18 6 4.0064 9.9366 1.4284 19 6 4.0942 8.5955 1.1056 20 6 4.3362 5.6597 1.3177 21 6 4.2837 -0.0210 -0.0004 22 8 5.6402 -0.0322 -0.0003 23 6 3.5771 -1.2146 0.0058 24 6 4.3174 -2.5273 0.0115 25 8 4.8540 -2.7771 -1.2891 26 14 3.1449 -3.8994 0.4735 27 6 2.1966 -1.2016 0.0057 28 1 -0.3633 0.0053 1.0276 29 1 -0.3634 0.8873 -0.5185 30 1 -0.3633 -0.8926 -0.5092 31 1 1.6511 2.1294 0.0004 32 1 2.6893 3.6435 -0.0186 33 1 2.8322 5.7677 -1.3348 34 1 4.2268 6.8844 -1.0081 35 1 0.7071 10.1159 2.1074 36 1 2.7205 11.5311 2.0409 37 1 4.8894 10.5578 1.3991 38 1 5.0458 8.1690 0.8246 39 1 5.1668 6.3494 1.4685 40 1 4.1631 5.0100 2.1755 41 1 6.0335 -0.0312 0.8831 42 1 5.1293 -2.4834 0.7373 43 1 4.1865 -2.8290 -1.9867 44 1 3.8629 -5.1993 0.4833 45 1 2.5556 -3.6351 1.8108 46 1 1.6510 -2.1337 0.0110 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10565092_13422088.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:14:53 Heat of formation + Delta-G solvation = -33.359347 kcal Electronic energy + Delta-G solvation = -30957.016268 eV Core-core repulsion = 26611.990721 eV Total energy + Delta-G solvation = -4345.025547 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.112 amu Computer time = 1.25 seconds Orbital eigenvalues (eV) -41.96874 -41.23245 -40.05413 -38.78792 -38.04896 -37.62023 -37.41770 -34.80199 -33.05439 -32.84699 -31.67836 -31.53430 -27.52908 -26.84381 -26.76714 -26.54084 -25.01268 -23.68956 -22.65757 -21.99077 -21.64569 -20.24896 -19.60252 -18.64360 -18.16635 -17.86195 -17.44373 -16.93938 -16.81374 -16.50251 -16.36018 -16.08670 -15.94993 -15.56569 -15.21028 -15.13375 -14.93671 -14.76860 -14.75949 -14.43523 -14.39741 -14.17629 -13.66428 -13.55992 -13.40675 -13.30873 -12.97819 -12.84525 -12.69954 -12.56392 -12.48134 -12.20287 -12.17507 -12.10715 -11.79655 -11.75900 -11.52800 -11.28832 -11.01873 -10.41413 -10.29037 -10.04184 -9.84345 -9.59431 -9.51547 -5.04695 -0.37002 0.05627 0.17085 0.27655 1.15740 1.24956 1.62310 1.67776 1.91981 1.99984 2.53257 2.61912 3.14253 3.36714 3.40206 3.50069 3.57613 3.62934 3.65594 3.79342 3.84935 3.92853 4.08422 4.10915 4.14223 4.18240 4.32578 4.38044 4.38958 4.47830 4.59833 4.61334 4.70036 4.73201 4.78507 4.81620 4.88330 4.91858 4.94825 4.96399 4.99024 5.08637 5.17209 5.26508 5.28748 5.39794 5.42022 5.48379 5.56525 5.67608 5.85551 6.40197 6.67485 6.75338 7.10704 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.093 4.093 3 C -0.063 4.063 4 C -0.181 4.181 5 C 0.558 3.442 6 O -0.562 6.562 7 N -0.697 5.697 8 C 0.117 3.883 9 H 0.089 0.911 10 C -0.122 4.122 11 C -0.074 4.074 12 H 0.105 0.895 13 C -0.070 4.070 14 C -0.049 4.049 15 Cl -0.074 7.074 16 C -0.121 4.121 17 C -0.117 4.117 18 C -0.116 4.116 19 C -0.112 4.112 20 C -0.138 4.138 21 C 0.161 3.839 22 O -0.491 6.491 23 C -0.159 4.159 24 C -0.075 4.075 25 O -0.555 6.555 26 Si 0.791 3.209 27 C -0.069 4.069 28 H 0.082 0.918 29 H 0.080 0.920 30 H 0.088 0.912 31 H 0.156 0.844 32 H 0.412 0.588 33 H 0.086 0.914 34 H 0.107 0.893 35 H 0.140 0.860 36 H 0.149 0.851 37 H 0.148 0.852 38 H 0.146 0.854 39 H 0.103 0.897 40 H 0.066 0.934 41 H 0.399 0.601 42 H 0.096 0.904 43 H 0.393 0.607 44 H -0.300 1.300 45 H -0.277 1.277 46 H 0.165 0.835 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.894 2.291 0.005 8.220 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.175 4.175 2 C -0.093 4.093 3 C -0.082 4.082 4 C -0.185 4.185 5 C 0.347 3.653 6 O -0.441 6.441 7 N -0.350 5.350 8 C 0.011 3.989 9 H 0.107 0.893 10 C -0.160 4.160 11 C -0.092 4.092 12 H 0.123 0.877 13 C -0.071 4.071 14 C -0.076 4.076 15 Cl -0.045 7.045 16 C -0.140 4.140 17 C -0.135 4.135 18 C -0.134 4.134 19 C -0.130 4.130 20 C -0.176 4.176 21 C 0.114 3.886 22 O -0.303 6.303 23 C -0.160 4.160 24 C -0.184 4.184 25 O -0.362 6.362 26 Si 0.695 3.305 27 C -0.087 4.087 28 H 0.101 0.899 29 H 0.099 0.901 30 H 0.107 0.893 31 H 0.173 0.827 32 H 0.250 0.750 33 H 0.104 0.896 34 H 0.125 0.875 35 H 0.157 0.843 36 H 0.167 0.833 37 H 0.166 0.834 38 H 0.164 0.836 39 H 0.121 0.879 40 H 0.085 0.915 41 H 0.258 0.742 42 H 0.114 0.886 43 H 0.242 0.758 44 H -0.228 1.228 45 H -0.203 1.203 46 H 0.182 0.818 Dipole moment (debyes) X Y Z Total from point charges -6.838 1.602 0.294 7.029 hybrid contribution 0.475 0.494 0.858 1.098 sum -6.363 2.096 1.152 6.798 Atomic orbital electron populations 1.20941 0.87815 1.04913 1.03802 1.20146 0.98229 0.91675 0.99255 1.21420 0.90959 0.99946 0.95868 1.20392 0.95084 0.92453 1.10554 1.18332 0.86921 0.84310 0.75761 1.90808 1.14927 1.87864 1.50517 1.45479 1.10586 1.04290 1.74598 1.21881 0.96802 0.82552 0.97625 0.89317 1.23374 0.99889 0.97071 0.95679 1.21671 0.99324 0.91013 0.97221 0.87663 1.19690 0.91696 0.96316 0.99388 1.21031 0.88210 0.92554 1.05789 1.98357 1.39369 1.69652 1.97088 1.21304 1.00649 0.91743 1.00259 1.21448 0.91945 1.01048 0.99063 1.21591 0.98776 0.95405 0.97643 1.21244 0.98265 0.93834 0.99664 1.23574 0.97891 0.98989 0.97161 1.18577 0.83499 0.90936 0.95574 1.84766 1.15530 1.96080 1.33884 1.20785 0.94920 0.95113 1.05229 1.25282 1.04155 0.99898 0.89036 1.86532 1.38606 1.94101 1.16989 0.93822 0.80934 0.73014 0.82770 1.21312 0.91738 0.99466 0.96138 0.89928 0.90061 0.89303 0.82666 0.75024 0.89581 0.87476 0.84252 0.83320 0.83438 0.83630 0.87895 0.91538 0.74244 0.88618 0.75790 1.22846 1.20340 0.81802 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 1.23 10.00 71.24 0.71 1.94 16 2 C -0.09 0.46 5.87 -19.90 -0.12 0.35 16 3 C -0.06 0.18 9.18 22.52 0.21 0.39 16 4 C -0.18 -0.78 5.89 -20.01 -0.12 -0.90 16 5 C 0.56 4.18 7.76 86.70 0.67 4.85 16 6 O -0.56 -8.98 14.76 16.92 0.25 -8.73 16 7 N -0.70 -0.25 5.21 -442.91 -2.31 -2.56 16 8 C 0.12 0.02 4.33 45.58 0.20 0.21 16 9 H 0.09 0.40 7.46 -2.39 -0.02 0.39 16 10 C -0.12 0.45 7.29 31.12 0.23 0.68 16 11 C -0.07 0.19 3.65 -11.01 -0.04 0.15 16 12 H 0.11 -0.29 6.54 -2.39 -0.02 -0.30 16 13 C -0.07 0.03 5.29 -19.84 -0.11 -0.08 16 14 C -0.05 -0.06 6.31 22.32 0.14 0.08 16 15 Cl -0.07 -0.07 27.14 -2.72 -0.07 -0.14 16 16 C -0.12 0.01 9.83 22.29 0.22 0.23 16 17 C -0.12 0.26 10.05 22.27 0.22 0.48 16 18 C -0.12 0.33 10.05 22.27 0.22 0.55 16 19 C -0.11 0.24 8.54 22.26 0.19 0.43 16 20 C -0.14 0.17 7.27 31.18 0.23 0.40 16 21 C 0.16 1.09 6.69 22.84 0.15 1.24 16 22 O -0.49 -5.36 10.91 -68.78 -0.75 -6.11 16 23 C -0.16 -0.26 5.27 -19.79 -0.10 -0.36 16 24 C -0.08 -0.13 2.38 71.24 0.17 0.04 16 25 O -0.55 -2.43 12.88 -148.98 -1.92 -4.35 16 26 Si 0.79 -2.26 29.91 68.60 2.05 -0.21 16 27 C -0.07 0.28 8.30 22.30 0.19 0.46 16 28 H 0.08 -0.90 8.14 -2.39 -0.02 -0.92 16 29 H 0.08 -0.95 8.08 -2.39 -0.02 -0.97 16 30 H 0.09 -1.12 8.08 -2.39 -0.02 -1.14 16 31 H 0.16 -1.38 6.40 -2.91 -0.02 -1.39 16 32 H 0.41 -2.20 6.73 -92.71 -0.62 -2.82 16 33 H 0.09 -0.41 8.14 -2.39 -0.02 -0.43 16 34 H 0.11 -0.51 7.64 -2.39 -0.02 -0.53 16 35 H 0.14 -0.31 8.06 -2.91 -0.02 -0.34 16 36 H 0.15 -0.93 8.06 -2.91 -0.02 -0.96 16 37 H 0.15 -1.02 8.06 -2.91 -0.02 -1.04 16 38 H 0.15 -0.80 6.73 -2.91 -0.02 -0.81 16 39 H 0.10 -0.27 6.40 -2.38 -0.02 -0.29 16 40 H 0.07 0.06 8.14 -2.39 -0.02 0.04 16 41 H 0.40 1.92 9.06 -74.06 -0.67 1.25 16 42 H 0.10 0.38 7.83 -2.39 -0.02 0.36 16 43 H 0.39 -1.78 8.70 -74.06 -0.64 -2.42 16 44 H -0.30 -1.58 7.11 99.48 0.71 -0.88 16 45 H -0.28 -0.22 7.11 99.48 0.71 0.49 16 46 H 0.17 -1.69 5.10 -2.91 -0.01 -1.71 16 Total: 0.00 -25.07 392.33 -0.32 -25.39 By element: Atomic # 1 Polarization: -13.60 SS G_CDS: -0.83 Total: -14.43 kcal Atomic # 6 Polarization: 7.87 SS G_CDS: 3.26 Total: 11.14 kcal Atomic # 7 Polarization: -0.25 SS G_CDS: -2.31 Total: -2.56 kcal Atomic # 8 Polarization: -16.77 SS G_CDS: -2.42 Total: -19.19 kcal Atomic # 14 Polarization: -2.26 SS G_CDS: 2.05 Total: -0.21 kcal Atomic # 17 Polarization: -0.07 SS G_CDS: -0.07 Total: -0.14 kcal Total: -25.07 -0.32 -25.39 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10565092_13422088.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -7.972 kcal (2) G-P(sol) polarization free energy of solvation -25.071 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -33.043 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.316 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.388 kcal (6) G-S(sol) free energy of system = (1) + (5) -33.359 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.25 seconds