Wall clock time and date at job start Sat Mar 6 2021 13:14:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46906 * 1 3 3 C 1.46898 * 110.99440 * 2 1 4 4 C 1.39047 * 110.99935 * 123.95362 * 2 1 3 5 5 C 1.39189 * 119.93233 * 120.02803 * 4 2 1 6 6 C 1.50704 * 119.96522 * 0.02562 * 5 4 2 7 7 O 1.42896 * 109.47387 * 285.00645 * 6 5 4 8 8 Si 1.86304 * 109.47190 * 165.00197 * 6 5 4 9 9 C 1.37634 * 120.07094 * 179.76497 * 5 4 2 10 10 C 1.39773 * 119.92657 * 0.48312 * 9 5 4 11 11 C 1.47527 * 120.06803 * 179.76971 * 10 9 5 12 12 O 1.21597 * 119.99547 * 359.72430 * 11 10 9 13 13 N 1.34770 * 120.00168 * 179.72254 * 11 10 9 14 14 C 1.46496 * 119.99991 * 179.97438 * 13 11 10 15 15 H 1.08993 * 112.85334 * 336.19852 * 14 13 11 16 16 C 1.53962 * 113.53546 * 107.50520 * 14 13 11 17 17 C 1.53787 * 87.01957 * 89.18971 * 16 14 13 18 18 H 1.09000 * 113.61351 * 270.77074 * 17 16 14 19 19 C 1.50697 * 113.61697 * 139.95094 * 17 16 14 20 20 C 1.38327 * 120.00607 * 140.88443 * 19 17 16 21 21 Cl 1.73599 * 120.01618 * 359.95819 * 20 19 17 22 22 C 1.38376 * 119.96955 * 179.97438 * 20 19 17 23 23 C 1.38187 * 119.99015 * 0.02562 * 22 20 19 24 24 C 1.38265 * 120.01179 * 0.02562 * 23 22 20 25 25 C 1.38213 * 120.03018 * 359.97438 * 24 23 22 26 26 C 1.53781 * 113.61345 * 204.99793 * 14 13 11 27 27 C 1.39813 * 119.86525 * 359.48945 * 10 9 5 28 28 C 1.37588 * 119.92623 * 0.25743 * 27 10 9 29 29 H 1.08997 * 109.47170 * 296.04682 * 1 2 3 30 30 H 1.08999 * 109.47247 * 56.05019 * 1 2 3 31 31 H 1.09002 * 109.46815 * 176.04713 * 1 2 3 32 32 H 1.09004 * 109.46938 * 183.95820 * 3 2 1 33 33 H 1.08996 * 109.47450 * 303.95057 * 3 2 1 34 34 H 1.08997 * 109.47525 * 63.95497 * 3 2 1 35 35 H 1.09002 * 109.46810 * 45.00657 * 6 5 4 36 36 H 0.96699 * 114.00325 * 179.97438 * 7 6 5 37 37 H 1.48500 * 109.99491 * 60.00355 * 8 6 5 38 38 H 1.48497 * 110.00183 * 181.31958 * 8 6 5 39 39 H 1.08004 * 120.03370 * 180.22874 * 9 5 4 40 40 H 0.97009 * 119.99998 * 359.97438 * 13 11 10 41 41 H 1.08999 * 113.66739 * 334.66103 * 16 14 13 42 42 H 1.09004 * 113.61151 * 203.70583 * 16 14 13 43 43 H 1.08008 * 120.00336 * 179.97438 * 22 20 19 44 44 H 1.08003 * 119.99774 * 179.97438 * 23 22 20 45 45 H 1.08002 * 119.98342 * 180.02562 * 24 23 22 46 46 H 1.07999 * 119.99708 * 180.27879 * 25 24 23 47 47 H 1.09005 * 113.61076 * 156.33618 * 26 14 13 48 48 H 1.08999 * 113.68970 * 25.44716 * 26 14 13 49 49 H 1.08002 * 120.03575 * 180.27139 * 27 10 9 50 50 H 1.08003 * 119.95988 * 179.97438 * 28 27 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4691 0.0000 0.0000 3 6 1.9954 1.3715 0.0000 4 6 1.9673 -0.7250 1.0768 5 6 2.7798 -1.8326 0.8519 6 6 3.1185 -2.2439 -0.5578 7 8 1.9839 -2.8739 -1.1559 8 14 4.5487 -3.4374 -0.5299 9 6 3.2785 -2.5495 1.9157 10 6 2.9601 -2.1701 3.2228 11 6 3.4888 -2.9393 4.3652 12 8 4.1983 -3.9073 4.1701 13 7 3.1855 -2.5690 5.6251 14 6 3.7100 -3.3332 6.7595 15 1 3.9626 -4.3605 6.4974 16 6 4.8208 -2.6001 7.5337 17 6 3.7045 -1.9871 8.3958 18 1 3.3118 -1.0504 8.0002 19 6 4.0491 -1.9051 9.8605 20 6 3.6724 -0.7976 10.5988 21 17 2.8036 0.4987 9.8381 22 6 3.9887 -0.7233 11.9439 23 6 4.6811 -1.7550 12.5486 24 6 5.0582 -2.8612 11.8099 25 6 4.7426 -2.9361 10.4664 26 6 2.8532 -3.2148 8.0310 27 6 2.1442 -1.0567 3.4454 28 6 1.6531 -0.3412 2.3778 29 1 -0.3633 0.4512 0.9233 30 1 -0.3634 0.5739 -0.8525 31 1 -0.3633 -1.0253 -0.0708 32 1 3.0827 1.3433 -0.0709 33 1 1.5898 1.9163 -0.8524 34 1 1.7043 1.8724 0.9233 35 1 3.3922 -1.3624 -1.1376 36 1 2.1301 -3.1650 -2.0664 37 1 4.1882 -4.6437 0.2576 38 1 4.9131 -3.8260 -1.9160 39 1 3.9118 -3.4066 1.7406 40 1 2.6197 -1.7965 5.7807 41 1 5.3616 -1.8677 6.9343 42 1 5.4820 -3.2680 8.0859 43 1 3.6952 0.1414 12.5207 44 1 4.9284 -1.6969 13.5984 45 1 5.5989 -3.6675 12.2831 46 1 5.0335 -3.8025 9.8909 47 1 2.9755 -4.0511 8.7194 48 1 1.8076 -2.9781 7.8340 49 1 1.9000 -0.7586 4.4543 50 1 1.0225 0.5187 2.5491 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10565092_13422196.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:14:57 Heat of formation + Delta-G solvation = 33.795933 kcal Electronic energy + Delta-G solvation = -32772.178618 eV Core-core repulsion = 28372.246186 eV Total energy + Delta-G solvation = -4399.932432 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 387.139 amu Computer time = 1.48 seconds Orbital eigenvalues (eV) -41.90904 -41.24035 -40.26624 -38.87746 -37.83943 -37.40799 -37.27174 -34.83822 -32.96385 -31.89888 -31.66192 -31.07299 -28.51611 -26.92204 -26.83210 -26.72722 -25.64382 -23.83781 -23.33211 -22.84557 -22.53334 -21.25006 -20.23382 -18.90088 -18.49667 -18.27444 -17.78549 -17.41867 -16.90968 -16.54908 -16.35836 -16.29624 -16.09379 -15.89588 -15.64496 -15.24109 -15.14085 -15.07958 -14.82492 -14.75321 -14.61993 -14.37047 -14.05122 -13.81413 -13.69320 -13.52077 -13.38507 -13.31407 -13.01425 -12.95530 -12.73314 -12.68359 -12.61859 -12.47224 -12.16607 -12.12152 -11.92983 -11.77160 -11.52517 -11.26592 -11.16762 -10.41059 -10.24362 -10.12621 -9.84262 -9.78099 -9.57679 -9.49905 -4.99338 -0.39552 0.13419 0.18690 0.29326 1.17152 1.25924 1.51216 1.61617 1.89423 1.96743 2.58304 2.63687 2.80019 3.36625 3.40698 3.56772 3.60417 3.67905 3.73720 3.78544 3.87054 3.95414 4.03805 4.10936 4.13219 4.17323 4.23747 4.38761 4.39691 4.40555 4.45894 4.47482 4.61072 4.61977 4.67095 4.72674 4.75438 4.75883 4.84332 4.90011 4.97507 4.98618 5.00551 5.01526 5.04658 5.09970 5.14009 5.24498 5.30390 5.40741 5.49885 5.53799 5.59123 5.87103 5.87219 6.27768 6.39722 6.64371 7.07511 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.032 3.968 2 N -0.520 5.520 3 C 0.024 3.976 4 C 0.140 3.860 5 C -0.074 4.074 6 C -0.050 4.050 7 O -0.546 6.546 8 Si 0.730 3.270 9 C -0.066 4.066 10 C -0.149 4.149 11 C 0.562 3.438 12 O -0.575 6.575 13 N -0.694 5.694 14 C 0.115 3.885 15 H 0.092 0.908 16 C -0.137 4.137 17 C -0.076 4.076 18 H 0.105 0.895 19 C -0.070 4.070 20 C -0.050 4.050 21 Cl -0.075 7.075 22 C -0.122 4.122 23 C -0.117 4.117 24 C -0.116 4.116 25 C -0.111 4.111 26 C -0.123 4.123 27 C -0.057 4.057 28 C -0.156 4.156 29 H 0.041 0.959 30 H 0.085 0.915 31 H 0.057 0.943 32 H 0.073 0.927 33 H 0.085 0.915 34 H 0.041 0.959 35 H 0.096 0.904 36 H 0.391 0.609 37 H -0.308 1.308 38 H -0.276 1.276 39 H 0.128 0.872 40 H 0.413 0.587 41 H 0.069 0.931 42 H 0.104 0.896 43 H 0.139 0.861 44 H 0.149 0.851 45 H 0.148 0.852 46 H 0.147 0.853 47 H 0.107 0.893 48 H 0.085 0.915 49 H 0.159 0.841 50 H 0.151 0.849 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.483 5.136 2.829 5.884 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.114 4.114 2 N -0.241 5.241 3 C -0.122 4.122 4 C 0.045 3.955 5 C -0.075 4.075 6 C -0.160 4.160 7 O -0.355 6.355 8 Si 0.637 3.363 9 C -0.086 4.086 10 C -0.152 4.152 11 C 0.351 3.649 12 O -0.456 6.456 13 N -0.346 5.346 14 C 0.010 3.990 15 H 0.110 0.890 16 C -0.175 4.175 17 C -0.094 4.094 18 H 0.123 0.877 19 C -0.070 4.070 20 C -0.076 4.076 21 Cl -0.046 7.046 22 C -0.140 4.140 23 C -0.136 4.136 24 C -0.134 4.134 25 C -0.129 4.129 26 C -0.161 4.161 27 C -0.076 4.076 28 C -0.176 4.176 29 H 0.060 0.940 30 H 0.103 0.897 31 H 0.076 0.924 32 H 0.092 0.908 33 H 0.103 0.897 34 H 0.060 0.940 35 H 0.114 0.886 36 H 0.241 0.759 37 H -0.236 1.236 38 H -0.202 1.202 39 H 0.145 0.855 40 H 0.252 0.748 41 H 0.088 0.912 42 H 0.122 0.878 43 H 0.157 0.843 44 H 0.166 0.834 45 H 0.166 0.834 46 H 0.165 0.835 47 H 0.126 0.874 48 H 0.103 0.897 49 H 0.176 0.824 50 H 0.169 0.831 Dipole moment (debyes) X Y Z Total from point charges 0.106 3.712 2.548 4.503 hybrid contribution -1.333 0.408 -0.164 1.404 sum -1.228 4.120 2.384 4.916 Atomic orbital electron populations 1.22435 0.84695 1.02375 1.01902 1.59378 1.09385 1.14990 1.40381 1.22564 1.01305 0.86211 1.02087 1.18949 0.93677 0.93148 0.89731 1.19232 0.99090 0.95418 0.93809 1.24510 0.95717 1.03113 0.92682 1.86539 1.36263 1.79438 1.33265 0.94510 0.82930 0.79704 0.79152 1.21142 0.97671 0.98105 0.91646 1.19802 1.03584 0.99146 0.92701 1.18357 0.79516 0.83377 0.83646 1.90789 1.39488 1.29419 1.85904 1.45469 1.52190 1.32717 1.04224 1.21924 0.95712 0.96206 0.85166 0.88982 1.23579 0.96406 1.00047 0.97514 1.21690 0.97988 0.99697 0.90026 0.87685 1.19699 0.98376 0.93084 0.95879 1.21033 1.01209 0.91290 0.94082 1.98358 1.75313 1.48953 1.81946 1.21297 0.99292 1.00582 0.92845 1.21441 0.97534 0.93204 1.01372 1.21592 0.98990 0.98678 0.94150 1.21254 0.97822 0.98530 0.95330 1.23381 0.99260 0.98050 0.95388 1.21418 0.93450 0.92043 1.00667 1.21849 1.01878 1.01683 0.92212 0.94027 0.89655 0.92428 0.90811 0.89662 0.94050 0.88595 0.75867 1.23603 1.20200 0.85491 0.74836 0.91220 0.87773 0.84344 0.83376 0.83426 0.83495 0.87447 0.89675 0.82385 0.83114 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 9.34 127.69 1.19 1.15 16 2 N -0.52 -0.17 4.20 -745.11 -3.13 -3.30 16 3 C 0.02 -0.09 9.38 127.69 1.20 1.10 16 4 C 0.14 0.30 4.70 38.47 0.18 0.48 16 5 C -0.07 -0.37 5.31 -19.78 -0.10 -0.48 16 6 C -0.05 -0.15 2.32 71.24 0.17 0.01 16 7 O -0.55 -2.72 12.86 -148.98 -1.92 -4.63 16 8 Si 0.73 2.66 30.19 68.60 2.07 4.73 16 9 C -0.07 -0.47 8.19 22.50 0.18 -0.29 16 10 C -0.15 -0.64 5.88 -20.08 -0.12 -0.76 16 11 C 0.56 3.77 7.76 86.69 0.67 4.44 16 12 O -0.58 -8.75 15.94 -4.02 -0.06 -8.81 16 13 N -0.69 0.25 5.21 -442.93 -2.31 -2.06 16 14 C 0.12 -0.08 4.33 45.58 0.20 0.12 16 15 H 0.09 0.30 7.46 -2.39 -0.02 0.28 16 16 C -0.14 0.28 7.27 31.18 0.23 0.51 16 17 C -0.08 0.22 3.65 -11.01 -0.04 0.18 16 18 H 0.11 -0.32 6.55 -2.39 -0.02 -0.33 16 19 C -0.07 0.05 5.29 -19.84 -0.11 -0.06 16 20 C -0.05 -0.06 6.31 22.32 0.14 0.08 16 21 Cl -0.07 -0.08 27.15 -2.72 -0.07 -0.15 16 22 C -0.12 0.00 9.83 22.29 0.22 0.22 16 23 C -0.12 0.26 10.05 22.26 0.22 0.49 16 24 C -0.12 0.36 10.05 22.27 0.22 0.58 16 25 C -0.11 0.28 8.54 22.27 0.19 0.47 16 26 C -0.12 0.51 7.29 31.12 0.23 0.74 16 27 C -0.06 0.11 9.53 22.50 0.21 0.32 16 28 C -0.16 0.24 8.53 22.36 0.19 0.43 16 29 H 0.04 -0.14 7.10 -2.39 -0.02 -0.16 16 30 H 0.08 -0.28 8.12 -2.39 -0.02 -0.30 16 31 H 0.06 0.14 8.14 -2.39 -0.02 0.12 16 32 H 0.07 -0.28 8.14 -2.38 -0.02 -0.30 16 33 H 0.08 -0.47 8.12 -2.39 -0.02 -0.49 16 34 H 0.04 -0.22 7.32 -2.39 -0.02 -0.24 16 35 H 0.10 0.01 7.78 -2.39 -0.02 -0.01 16 36 H 0.39 -1.03 8.74 -74.06 -0.65 -1.68 16 37 H -0.31 -3.96 6.76 99.48 0.67 -3.29 16 38 H -0.28 -1.69 7.11 99.48 0.71 -0.99 16 39 H 0.13 1.27 4.46 -2.91 -0.01 1.25 16 40 H 0.41 -2.50 6.72 -92.70 -0.62 -3.12 16 41 H 0.07 0.00 8.14 -2.39 -0.02 -0.02 16 42 H 0.10 -0.37 6.40 -2.38 -0.02 -0.39 16 43 H 0.14 -0.29 8.06 -2.91 -0.02 -0.31 16 44 H 0.15 -0.93 8.06 -2.91 -0.02 -0.95 16 45 H 0.15 -1.06 8.06 -2.91 -0.02 -1.08 16 46 H 0.15 -0.89 6.73 -2.91 -0.02 -0.91 16 47 H 0.11 -0.57 7.64 -2.38 -0.02 -0.59 16 48 H 0.08 -0.43 8.14 -2.39 -0.02 -0.45 16 49 H 0.16 -1.40 6.39 -2.91 -0.02 -1.41 16 50 H 0.15 -0.88 6.99 -2.91 -0.02 -0.90 16 Total: 0.00 -20.33 416.17 -0.41 -20.74 By element: Atomic # 1 Polarization: -16.01 SS G_CDS: -0.27 Total: -16.28 kcal Atomic # 6 Polarization: 4.48 SS G_CDS: 5.28 Total: 9.76 kcal Atomic # 7 Polarization: 0.08 SS G_CDS: -5.44 Total: -5.36 kcal Atomic # 8 Polarization: -11.47 SS G_CDS: -1.98 Total: -13.45 kcal Atomic # 14 Polarization: 2.66 SS G_CDS: 2.07 Total: 4.73 kcal Atomic # 17 Polarization: -0.08 SS G_CDS: -0.07 Total: -0.15 kcal Total: -20.33 -0.41 -20.74 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10565092_13422196.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 54.540 kcal (2) G-P(sol) polarization free energy of solvation -20.333 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 34.207 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.412 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.744 kcal (6) G-S(sol) free energy of system = (1) + (5) 33.796 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.48 seconds