Wall clock time and date at job start Sat Mar 6 2021 13:15:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42894 * 1 3 3 C 1.35991 * 117.00760 * 2 1 4 4 C 1.38559 * 120.06152 * 0.26823 * 3 2 1 5 5 C 1.38276 * 120.01795 * 180.29932 * 4 3 2 6 6 C 1.50703 * 119.92271 * 179.72400 * 5 4 3 7 7 O 1.42896 * 109.47055 * 299.72750 * 6 5 4 8 8 Si 1.86304 * 109.46911 * 179.72642 * 6 5 4 9 9 C 1.38208 * 120.15614 * 359.45053 * 5 4 3 10 10 C 1.38379 * 120.13186 * 0.25434 * 9 5 4 11 11 Cl 1.73600 * 120.01311 * 180.02562 * 10 9 5 12 12 C 1.38626 * 119.97583 * 0.02562 * 10 9 5 13 13 O 1.36024 * 120.07396 * 180.02562 * 12 10 9 14 14 C 1.42895 * 117.00069 * 90.00537 * 13 12 10 15 15 C 1.53006 * 109.47364 * 89.99596 * 14 13 12 16 16 C 1.50700 * 109.47645 * 209.99785 * 14 13 12 17 17 O 1.21283 * 119.99596 * 0.02562 * 16 14 13 18 18 N 1.34777 * 120.00513 * 179.97438 * 16 14 13 19 19 C 1.46500 * 119.99756 * 180.02562 * 18 16 14 20 20 H 1.08995 * 112.85135 * 23.80972 * 19 18 16 21 21 C 1.53784 * 113.60989 * 155.00492 * 19 18 16 22 22 C 1.53772 * 87.08286 * 89.11515 * 21 19 18 23 23 H 1.09008 * 113.61573 * 270.88398 * 22 21 19 24 24 C 1.50705 * 113.61555 * 140.06370 * 22 21 19 25 25 C 1.38329 * 120.00379 * 119.99976 * 24 22 21 26 26 Cl 1.73604 * 120.01695 * 359.97438 * 25 24 22 27 27 C 1.38377 * 119.97180 * 179.97438 * 25 24 22 28 28 C 1.38196 * 119.98548 * 0.02562 * 27 25 24 29 29 C 1.38261 * 120.01035 * 0.02562 * 28 27 25 30 30 C 1.38224 * 120.00434 * 299.72210 * 24 22 21 31 31 C 1.53780 * 87.08354 * 25.43021 * 22 21 19 32 32 H 1.09002 * 109.46953 * 60.00363 * 1 2 3 33 33 H 1.08996 * 109.47786 * 180.02562 * 1 2 3 34 34 H 1.08996 * 109.47580 * 300.01068 * 1 2 3 35 35 H 1.08003 * 119.99236 * 0.02562 * 4 3 2 36 36 H 1.09002 * 109.47152 * 59.72558 * 6 5 4 37 37 H 0.96708 * 114.00101 * 299.99358 * 7 6 5 38 38 H 1.48501 * 109.99652 * 179.97438 * 8 6 5 39 39 H 1.48494 * 110.00064 * 301.31786 * 8 6 5 40 40 H 1.07994 * 119.93878 * 180.27121 * 9 5 4 41 41 H 1.08999 * 109.47059 * 329.99789 * 14 13 12 42 42 H 1.08994 * 109.47127 * 300.00330 * 15 14 13 43 43 H 1.08999 * 109.46875 * 60.00080 * 15 14 13 44 44 H 1.08997 * 109.47084 * 180.02562 * 15 14 13 45 45 H 0.97000 * 119.99705 * 0.02562 * 18 16 14 46 46 H 1.09000 * 113.61276 * 203.66589 * 21 19 18 47 47 H 1.08997 * 113.61383 * 334.55987 * 21 19 18 48 48 H 1.07999 * 120.00802 * 179.97438 * 27 25 24 49 49 H 1.07996 * 119.99243 * 180.02562 * 28 27 25 50 50 H 1.08003 * 119.98076 * 180.02562 * 29 28 27 51 51 H 1.08000 * 119.99969 * 0.02562 * 30 24 22 52 52 H 1.09004 * 113.61879 * 220.01859 * 31 22 21 53 53 H 1.09003 * 113.61321 * 89.11497 * 31 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0465 1.2116 0.0000 4 6 1.2933 2.3746 0.0056 5 6 1.9221 3.6061 -0.0006 6 6 1.1007 4.8696 -0.0008 7 8 0.2760 4.9014 -1.1673 8 14 2.2349 6.3475 -0.0016 9 6 3.3021 3.6810 -0.0010 10 6 4.0606 2.5236 -0.0005 11 17 5.7939 2.6212 -0.0003 12 6 3.4359 1.2860 -0.0001 13 8 4.1795 0.1471 0.0010 14 6 4.5334 -0.3954 1.2747 15 6 3.4518 -1.3776 1.7291 16 6 5.8524 -1.1162 1.1650 17 8 6.4324 -1.1604 0.1008 18 7 6.3878 -1.7107 2.2495 19 6 7.6703 -2.4108 2.1428 20 1 8.2787 -2.0552 1.3113 21 6 8.4364 -2.4991 3.4733 22 6 7.6801 -3.8128 3.7312 23 1 6.7285 -3.6752 4.2448 24 6 8.5322 -4.8874 4.3559 25 6 8.1882 -5.4142 5.5878 26 17 6.7752 -4.8372 6.4151 27 6 8.9708 -6.4012 6.1605 28 6 10.0958 -6.8597 5.5018 29 6 10.4397 -6.3320 4.2709 30 6 9.6545 -5.3509 3.6953 31 6 7.5432 -3.9421 2.2050 32 1 -0.3633 0.5138 -0.8900 33 1 -0.3634 -1.0276 0.0005 34 1 -0.3634 0.5140 0.8898 35 1 0.2147 2.3192 0.0104 36 1 0.4721 4.8944 0.8893 37 1 0.7696 4.8819 -1.9987 38 1 1.4370 7.6000 -0.0023 39 1 3.1198 6.3093 1.1903 40 1 3.7896 4.6446 -0.0015 41 1 4.6199 0.4117 2.0021 42 1 2.4979 -0.8564 1.8086 43 1 3.3653 -2.1848 1.0018 44 1 3.7216 -1.7911 2.7009 45 1 5.9241 -1.6749 3.1007 46 1 9.5114 -2.6310 3.3502 47 1 8.1843 -1.7048 4.1758 48 1 8.7030 -6.8126 7.1225 49 1 10.7065 -7.6304 5.9484 50 1 11.3187 -6.6910 3.7563 51 1 9.9209 -4.9426 2.7316 52 1 6.5698 -4.3128 1.8836 53 1 8.3739 -4.4686 1.7351 There are 77 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 77 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10565092_13428712.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:15:01 Heat of formation + Delta-G solvation = -57.451880 kcal Electronic energy + Delta-G solvation = -39931.729344 eV Core-core repulsion = 34596.101844 eV Total energy + Delta-G solvation = -5335.627500 eV No. of doubly occupied orbitals = 77 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 452.104 amu Computer time = 2.02 seconds Orbital eigenvalues (eV) -42.04900 -41.60561 -40.59625 -39.40336 -39.19129 -38.58522 -37.77110 -37.41611 -36.88980 -34.90295 -33.12916 -31.81870 -31.67125 -31.37233 -31.16752 -28.55182 -26.79819 -26.74269 -26.47064 -25.30078 -23.76646 -23.60580 -22.92012 -22.57129 -21.77960 -20.24238 -19.69775 -18.84521 -18.58823 -18.35024 -18.13316 -17.51934 -17.28318 -16.94405 -16.66102 -16.43489 -16.31257 -16.24255 -16.03254 -15.92748 -15.70213 -15.63828 -15.23451 -14.93871 -14.82969 -14.71861 -14.66567 -14.40052 -14.31594 -13.98932 -13.74346 -13.52302 -13.41780 -13.33594 -13.22981 -12.96925 -12.93334 -12.71137 -12.68780 -12.58346 -12.48443 -12.44434 -12.16400 -12.13610 -11.91779 -11.84934 -11.77536 -11.52820 -11.38115 -11.26998 -10.77360 -10.53639 -10.17319 -9.87160 -9.83912 -9.58720 -9.42117 -5.00910 -0.35396 -0.03286 0.17768 0.28414 0.85259 1.16243 1.24477 1.42879 1.59214 1.62307 1.92565 2.16463 2.20008 2.62611 2.66973 3.32932 3.39644 3.50912 3.54544 3.58966 3.66112 3.72894 3.77229 3.83651 3.85524 3.93004 3.96299 4.01616 4.03715 4.10064 4.16253 4.30567 4.35484 4.38657 4.39644 4.43290 4.56248 4.60564 4.67931 4.68816 4.71380 4.73680 4.74687 4.81565 4.83121 4.89106 4.97243 5.00528 5.07334 5.10538 5.14519 5.22336 5.29479 5.40243 5.49073 5.57431 5.86290 5.90635 6.30055 6.44280 6.70745 7.10658 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.013 3.987 2 O -0.312 6.312 3 C 0.127 3.873 4 C -0.164 4.164 5 C -0.063 4.063 6 C -0.063 4.063 7 O -0.548 6.548 8 Si 0.755 3.245 9 C -0.136 4.136 10 C -0.023 4.023 11 Cl -0.049 7.049 12 C 0.053 3.947 13 O -0.306 6.306 14 C 0.074 3.926 15 C -0.161 4.161 16 C 0.521 3.479 17 O -0.556 6.556 18 N -0.697 5.697 19 C 0.118 3.882 20 H 0.090 0.910 21 C -0.122 4.122 22 C -0.075 4.075 23 H 0.105 0.895 24 C -0.070 4.070 25 C -0.049 4.049 26 Cl -0.075 7.075 27 C -0.121 4.121 28 C -0.117 4.117 29 C -0.116 4.116 30 C -0.112 4.112 31 C -0.138 4.138 32 H 0.066 0.934 33 H 0.118 0.882 34 H 0.071 0.929 35 H 0.161 0.839 36 H 0.124 0.876 37 H 0.397 0.603 38 H -0.291 1.291 39 H -0.282 1.282 40 H 0.156 0.844 41 H 0.101 0.899 42 H 0.080 0.920 43 H 0.060 0.940 44 H 0.096 0.904 45 H 0.414 0.586 46 H 0.107 0.893 47 H 0.085 0.915 48 H 0.139 0.861 49 H 0.149 0.851 50 H 0.148 0.852 51 H 0.147 0.853 52 H 0.067 0.933 53 H 0.103 0.897 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.447 -0.521 3.230 3.578 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.081 4.081 2 O -0.225 6.225 3 C 0.080 3.920 4 C -0.183 4.183 5 C -0.064 4.064 6 C -0.174 4.174 7 O -0.356 6.356 8 Si 0.661 3.339 9 C -0.154 4.154 10 C -0.050 4.050 11 Cl -0.019 7.019 12 C 0.007 3.993 13 O -0.222 6.222 14 C 0.015 3.985 15 C -0.219 4.219 16 C 0.306 3.694 17 O -0.432 6.432 18 N -0.351 5.351 19 C 0.013 3.987 20 H 0.108 0.892 21 C -0.160 4.160 22 C -0.093 4.093 23 H 0.123 0.877 24 C -0.070 4.070 25 C -0.076 4.076 26 Cl -0.046 7.046 27 C -0.140 4.140 28 C -0.135 4.135 29 C -0.134 4.134 30 C -0.130 4.130 31 C -0.177 4.177 32 H 0.085 0.915 33 H 0.136 0.864 34 H 0.090 0.910 35 H 0.178 0.822 36 H 0.141 0.859 37 H 0.248 0.752 38 H -0.218 1.218 39 H -0.208 1.208 40 H 0.173 0.827 41 H 0.119 0.881 42 H 0.099 0.901 43 H 0.079 0.921 44 H 0.115 0.885 45 H 0.252 0.748 46 H 0.125 0.875 47 H 0.104 0.896 48 H 0.157 0.843 49 H 0.167 0.833 50 H 0.166 0.834 51 H 0.164 0.836 52 H 0.086 0.914 53 H 0.121 0.879 Dipole moment (debyes) X Y Z Total from point charges -1.080 -0.060 3.238 3.414 hybrid contribution -0.690 -0.304 0.944 1.208 sum -1.770 -0.365 4.182 4.555 Atomic orbital electron populations 1.23450 0.76048 1.05881 1.02687 1.86212 1.23432 1.25166 1.87703 1.19222 0.90446 0.86156 0.96138 1.21303 1.01675 0.90079 1.05200 1.20216 0.92578 0.96126 0.97462 1.25074 0.99606 1.00655 0.92081 1.86486 1.36185 1.96738 1.16210 0.93686 0.78679 0.74122 0.87457 1.20899 0.93036 0.97189 1.04281 1.21097 0.86000 0.93662 1.04244 1.98416 1.08479 1.98460 1.96587 1.17793 0.87342 0.85395 1.08777 1.86252 1.69902 1.38149 1.27889 1.22306 0.92864 0.97445 0.85908 1.22249 0.98238 0.99003 1.02398 1.20515 0.86287 0.78544 0.84007 1.90735 1.62871 1.60315 1.29329 1.45468 1.22730 1.54790 1.12082 1.21841 0.84754 0.92495 0.99625 0.89205 1.23369 1.00541 0.96540 0.95512 1.21680 0.98702 0.93317 0.95637 0.87682 1.19690 0.96694 0.97776 0.92876 1.21029 0.91666 0.99834 0.95045 1.98359 1.39882 1.88339 1.78023 1.21300 0.95265 0.96300 1.01141 1.21441 0.96352 1.00287 0.95435 1.21594 1.00165 0.96104 0.95533 1.21255 0.93787 0.97277 1.00659 1.23551 1.03469 0.95860 0.94781 0.91493 0.86391 0.91019 0.82174 0.85868 0.75247 1.21824 1.20816 0.82698 0.88141 0.90092 0.92084 0.88538 0.74836 0.87510 0.89636 0.84329 0.83347 0.83421 0.83551 0.91371 0.87857 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.07 9.81 113.37 1.11 1.04 16 2 O -0.31 -0.58 8.19 -79.59 -0.65 -1.24 16 3 C 0.13 0.36 6.54 22.56 0.15 0.50 16 4 C -0.16 0.18 8.60 22.36 0.19 0.37 16 5 C -0.06 0.11 5.39 -19.86 -0.11 0.00 16 6 C -0.06 0.24 2.82 71.24 0.20 0.44 16 7 O -0.55 1.82 12.77 -148.98 -1.90 -0.08 16 8 Si 0.75 -2.63 29.78 68.60 2.04 -0.59 16 9 C -0.14 -0.01 8.45 22.30 0.19 0.17 16 10 C -0.02 -0.11 6.33 22.40 0.14 0.04 16 11 Cl -0.05 -0.33 28.50 -2.72 -0.08 -0.41 16 12 C 0.05 0.33 5.56 22.58 0.13 0.46 16 13 O -0.31 -3.03 8.48 -67.41 -0.57 -3.60 16 14 C 0.07 0.28 3.20 29.85 0.10 0.38 16 15 C -0.16 0.11 9.00 71.98 0.65 0.76 16 16 C 0.52 3.55 7.23 87.66 0.63 4.19 16 17 O -0.56 -9.12 16.10 16.00 0.26 -8.86 16 18 N -0.70 0.14 5.16 -440.04 -2.27 -2.13 16 19 C 0.12 -0.02 4.32 45.52 0.20 0.18 16 20 H 0.09 0.37 7.46 -2.39 -0.02 0.35 16 21 C -0.12 0.45 7.29 31.12 0.23 0.68 16 22 C -0.08 0.18 3.64 -11.02 -0.04 0.14 16 23 H 0.11 -0.26 6.57 -2.38 -0.02 -0.27 16 24 C -0.07 0.01 5.29 -19.84 -0.11 -0.09 16 25 C -0.05 -0.08 6.31 22.32 0.14 0.06 16 26 Cl -0.07 -0.12 27.16 -2.72 -0.07 -0.19 16 27 C -0.12 -0.04 9.83 22.29 0.22 0.18 16 28 C -0.12 0.23 10.05 22.27 0.22 0.45 16 29 C -0.12 0.31 10.05 22.27 0.22 0.53 16 30 C -0.11 0.23 8.63 22.26 0.19 0.42 16 31 C -0.14 0.18 7.25 31.12 0.23 0.41 16 32 H 0.07 -0.44 7.68 -2.39 -0.02 -0.46 16 33 H 0.12 -0.97 8.14 -2.39 -0.02 -0.99 16 34 H 0.07 -0.59 7.65 -2.39 -0.02 -0.61 16 35 H 0.16 -0.73 6.30 -2.91 -0.02 -0.75 16 36 H 0.12 -0.53 7.96 -2.39 -0.02 -0.55 16 37 H 0.40 -4.13 8.70 -74.05 -0.64 -4.78 16 38 H -0.29 -1.03 7.11 99.48 0.71 -0.32 16 39 H -0.28 -0.36 7.11 99.48 0.71 0.35 16 40 H 0.16 -0.49 4.86 -2.91 -0.01 -0.50 16 41 H 0.10 0.05 7.91 -2.39 -0.02 0.03 16 42 H 0.08 -0.07 6.28 -2.39 -0.02 -0.08 16 43 H 0.06 0.16 8.14 -2.39 -0.02 0.14 16 44 H 0.10 -0.62 7.57 -2.39 -0.02 -0.63 16 45 H 0.41 -2.45 8.12 -92.71 -0.75 -3.20 16 46 H 0.11 -0.51 7.73 -2.39 -0.02 -0.53 16 47 H 0.09 -0.40 8.14 -2.39 -0.02 -0.42 16 48 H 0.14 -0.25 8.06 -2.91 -0.02 -0.27 16 49 H 0.15 -0.89 8.06 -2.91 -0.02 -0.91 16 50 H 0.15 -1.00 8.06 -2.91 -0.02 -1.03 16 51 H 0.15 -0.79 6.65 -2.91 -0.02 -0.81 16 52 H 0.07 0.05 8.14 -2.38 -0.02 0.04 16 53 H 0.10 -0.28 6.31 -2.39 -0.02 -0.30 16 Total: 0.00 -23.57 460.42 1.28 -22.29 By element: Atomic # 1 Polarization: -16.15 SS G_CDS: -0.36 Total: -16.51 kcal Atomic # 6 Polarization: 6.43 SS G_CDS: 4.88 Total: 11.32 kcal Atomic # 7 Polarization: 0.14 SS G_CDS: -2.27 Total: -2.13 kcal Atomic # 8 Polarization: -10.91 SS G_CDS: -2.87 Total: -13.77 kcal Atomic # 14 Polarization: -2.63 SS G_CDS: 2.04 Total: -0.59 kcal Atomic # 17 Polarization: -0.45 SS G_CDS: -0.15 Total: -0.60 kcal Total: -23.57 1.28 -22.29 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10565092_13428712.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -35.163 kcal (2) G-P(sol) polarization free energy of solvation -23.569 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -58.732 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.281 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.288 kcal (6) G-S(sol) free energy of system = (1) + (5) -57.452 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.02 seconds