Wall clock time and date at job start Sat Mar 6 2021 13:15:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86293 * 109.47327 * 2 1 4 4 C 1.50702 * 109.47021 * 120.00171 * 2 1 3 5 5 C 1.32699 * 124.68448 * 65.30480 * 4 2 1 6 6 C 1.44506 * 113.09659 * 180.19342 * 5 4 2 7 7 C 1.47038 * 123.49356 * 179.76340 * 6 5 4 8 8 O 1.21660 * 120.00374 * 179.73061 * 7 6 5 9 9 N 1.34782 * 120.00008 * 359.73007 * 7 6 5 10 10 C 1.46497 * 120.00306 * 179.97438 * 9 7 6 11 11 H 1.09005 * 112.90745 * 23.75020 * 10 9 7 12 12 C 1.53778 * 113.61643 * 154.99949 * 10 9 7 13 13 C 1.53783 * 87.07960 * 89.11721 * 12 10 9 14 14 H 1.08998 * 113.61692 * 270.80090 * 13 12 10 15 15 C 1.50701 * 113.61112 * 139.98346 * 13 12 10 16 16 C 1.38335 * 120.00592 * 120.00479 * 15 13 12 17 17 Cl 1.73599 * 120.01202 * 0.02562 * 16 15 13 18 18 C 1.38369 * 119.97082 * 180.29680 * 16 15 13 19 19 C 1.38199 * 119.98895 * 359.42034 * 18 16 15 20 20 C 1.38264 * 120.01177 * 0.59894 * 19 18 16 21 21 C 1.38224 * 120.02372 * 359.67909 * 20 19 18 22 22 C 1.53774 * 113.61724 * 252.50042 * 10 9 7 23 23 C 1.36229 * 113.01512 * 359.49658 * 6 5 4 24 24 Cl 1.73598 * 124.60441 * 180.28634 * 23 6 5 25 25 S 1.70443 * 110.78963 * 0.26782 * 23 6 5 26 26 H 0.96692 * 113.99596 * 299.99955 * 1 2 3 27 27 H 1.09005 * 109.47082 * 239.99963 * 2 1 3 28 28 H 1.48502 * 110.00277 * 178.68242 * 3 2 1 29 29 H 1.48495 * 110.00231 * 300.00172 * 3 2 1 30 30 H 1.07994 * 123.45302 * 359.95717 * 5 4 2 31 31 H 0.96996 * 119.99623 * 359.97438 * 9 7 6 32 32 H 1.09001 * 113.61411 * 334.57081 * 12 10 9 33 33 H 1.09001 * 113.62024 * 203.66949 * 12 10 9 34 34 H 1.08000 * 120.00704 * 179.71594 * 18 16 15 35 35 H 1.07997 * 119.99421 * 180.27338 * 19 18 16 36 36 H 1.07991 * 119.99053 * 179.69572 * 20 19 18 37 37 H 1.08004 * 119.99298 * 179.97438 * 21 20 19 38 38 H 1.08999 * 113.61819 * 156.33370 * 22 10 9 39 39 H 1.09004 * 113.61572 * 25.43147 * 22 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 1.2305 5 6 1.7532 -2.0010 1.4829 6 6 2.3356 -2.4188 2.7377 7 6 2.2685 -3.7976 3.2441 8 8 2.7859 -4.0806 4.3082 9 7 1.6339 -4.7479 2.5295 10 6 1.5675 -6.1218 3.0338 11 1 1.6785 -6.1821 4.1165 12 6 0.3699 -6.9197 2.4919 13 6 1.2772 -7.3363 1.3222 14 1 1.2461 -6.6469 0.4785 15 6 1.1065 -8.7754 0.9087 16 6 0.7054 -9.0822 -0.3791 17 17 0.3992 -7.8097 -1.5196 18 6 0.5430 -10.4036 -0.7562 19 6 0.7931 -11.4163 0.1502 20 6 1.1936 -11.1090 1.4374 21 6 1.3505 -9.7891 1.8164 22 6 2.4685 -7.1038 2.2666 23 6 2.9581 -1.4041 3.4000 24 17 3.7630 -1.5723 4.9289 25 16 2.8398 0.0528 2.5235 26 1 -0.3932 0.4417 0.7650 27 1 1.7924 -0.5139 -0.8900 28 1 3.5347 1.7702 0.0321 29 1 1.5616 2.4678 -1.2084 30 1 1.2238 -2.6696 0.8204 31 1 1.2210 -4.5221 1.6813 32 1 -0.4710 -6.2948 2.1911 33 1 0.0732 -7.7507 3.1319 34 1 0.2254 -10.6436 -1.7602 35 1 0.6706 -12.4478 -0.1453 36 1 1.3842 -11.9006 2.1469 37 1 1.6630 -9.5496 2.8221 38 1 2.7457 -7.9851 2.8449 39 1 3.3219 -6.6275 1.7838 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10565092_13431040.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:15:07 Heat of formation + Delta-G solvation = 11.828135 kcal Electronic energy + Delta-G solvation = -27086.198911 eV Core-core repulsion = 22946.705105 eV Total energy + Delta-G solvation = -4139.493806 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 384.014 amu Computer time = 0.80 seconds Orbital eigenvalues (eV) -41.71237 -40.61740 -39.30546 -38.64242 -37.85360 -37.41835 -36.99054 -34.54239 -31.97880 -31.74740 -31.57052 -27.16892 -26.81716 -26.76310 -25.34938 -23.74959 -22.65029 -22.31352 -20.86474 -20.20649 -19.45325 -18.41287 -18.02250 -17.75089 -17.10997 -16.70400 -16.47319 -16.41935 -16.00983 -15.77514 -15.75817 -15.26213 -14.97169 -14.86335 -14.76395 -14.50509 -14.40479 -14.25059 -14.13394 -13.57293 -13.38131 -13.07742 -12.98702 -12.74206 -12.56072 -12.50258 -12.39362 -12.22912 -12.09043 -11.93736 -11.80688 -11.55711 -11.31356 -10.87502 -10.67574 -10.13429 -9.92915 -9.89719 -9.69986 -9.63147 -5.31978 -0.61309 -0.22085 0.12219 0.21612 0.41533 0.67621 1.02332 1.08055 1.15637 1.44156 1.76396 2.11111 2.24905 2.55610 3.13462 3.33811 3.38652 3.52079 3.60372 3.75093 3.81408 3.84877 3.87588 3.97734 4.06014 4.21029 4.28573 4.30876 4.33664 4.58141 4.62095 4.64704 4.65915 4.78223 4.83159 4.88224 4.89009 4.94498 5.05814 5.21522 5.35743 5.40916 5.55939 5.76150 6.31211 6.43153 7.19366 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.532 6.532 2 C -0.025 4.025 3 Si 0.652 3.348 4 C -0.236 4.236 5 C -0.070 4.070 6 C -0.160 4.160 7 C 0.579 3.421 8 O -0.516 6.516 9 N -0.707 5.707 10 C 0.123 3.877 11 H 0.109 0.891 12 C -0.133 4.133 13 C -0.082 4.082 14 H 0.105 0.895 15 C -0.061 4.061 16 C -0.033 4.033 17 Cl -0.068 7.068 18 C -0.109 4.109 19 C -0.111 4.111 20 C -0.111 4.111 21 C -0.106 4.106 22 C -0.142 4.142 23 C -0.113 4.113 24 Cl 0.027 6.973 25 S 0.237 5.763 26 H 0.382 0.618 27 H 0.128 0.872 28 H -0.234 1.234 29 H -0.229 1.229 30 H 0.156 0.844 31 H 0.401 0.599 32 H 0.079 0.921 33 H 0.100 0.900 34 H 0.133 0.867 35 H 0.132 0.868 36 H 0.130 0.870 37 H 0.133 0.867 38 H 0.097 0.903 39 H 0.076 0.924 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.146 0.765 -0.888 2.445 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.338 6.338 2 C -0.138 4.138 3 Si 0.550 3.450 4 C -0.353 4.353 5 C -0.100 4.100 6 C -0.179 4.179 7 C 0.365 3.635 8 O -0.392 6.392 9 N -0.359 5.359 10 C 0.018 3.982 11 H 0.127 0.873 12 C -0.171 4.171 13 C -0.100 4.100 14 H 0.123 0.877 15 C -0.062 4.062 16 C -0.060 4.060 17 Cl -0.039 7.039 18 C -0.127 4.127 19 C -0.130 4.130 20 C -0.129 4.129 21 C -0.124 4.124 22 C -0.181 4.181 23 C -0.260 4.260 24 Cl 0.056 6.944 25 S 0.502 5.498 26 H 0.230 0.770 27 H 0.145 0.855 28 H -0.158 1.158 29 H -0.151 1.151 30 H 0.174 0.826 31 H 0.236 0.764 32 H 0.097 0.903 33 H 0.118 0.882 34 H 0.151 0.849 35 H 0.150 0.850 36 H 0.148 0.852 37 H 0.151 0.849 38 H 0.115 0.885 39 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges -0.632 2.432 -0.792 2.635 hybrid contribution -0.588 -2.035 -0.861 2.287 sum -1.220 0.397 -1.654 2.093 Atomic orbital electron populations 1.86544 1.16307 1.81647 1.49257 1.24437 0.85399 1.09153 0.94824 0.95094 0.82381 0.77235 0.90254 1.24797 1.08965 0.98673 1.02854 1.21004 0.99062 0.95034 0.94861 1.20200 1.06049 0.94769 0.96850 1.17381 0.78419 0.83584 0.84130 1.90882 1.45088 1.81733 1.21466 1.45484 1.57397 1.08407 1.24578 1.21821 0.96371 0.80166 0.99872 0.87291 1.23416 0.96767 1.00132 0.96802 1.21743 0.97743 0.92609 0.97894 0.87719 1.19559 0.99014 0.95882 0.91758 1.20863 1.04523 0.89622 0.90997 1.98371 1.94239 1.51386 1.59938 1.21105 1.00207 0.90646 1.00765 1.21174 0.99069 0.99328 0.93392 1.21295 0.98544 0.96622 0.96482 1.21019 0.99879 0.91969 0.99553 1.23572 0.97010 0.99828 0.97679 1.25530 1.03712 1.00533 0.96240 1.98443 1.75724 1.97288 1.22900 1.83284 1.50545 1.06386 1.09608 0.76971 0.85502 1.15834 1.15138 0.82622 0.76413 0.90262 0.88181 0.84887 0.85004 0.85212 0.84903 0.88509 0.90530 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 1.02 12.88 -35.23 -0.45 0.57 16 2 C -0.02 0.06 2.94 36.01 0.11 0.16 16 3 Si 0.65 -1.62 30.92 -169.99 -5.26 -6.88 16 4 C -0.24 0.37 5.65 -36.19 -0.20 0.16 16 5 C -0.07 0.07 9.75 -39.00 -0.38 -0.31 16 6 C -0.16 -0.21 5.98 -104.59 -0.63 -0.83 16 7 C 0.58 1.48 7.79 -12.69 -0.10 1.38 16 8 O -0.52 -3.01 14.51 5.22 0.08 -2.93 16 9 N -0.71 0.17 5.24 -54.21 -0.28 -0.11 16 10 C 0.12 -0.06 4.32 -67.12 -0.29 -0.35 16 11 H 0.11 0.09 7.47 -51.93 -0.39 -0.29 16 12 C -0.13 0.23 7.29 -25.92 -0.19 0.04 16 13 C -0.08 0.08 3.64 -90.96 -0.33 -0.25 16 14 H 0.10 -0.09 6.57 -51.93 -0.34 -0.43 16 15 C -0.06 -0.01 5.29 -104.59 -0.55 -0.56 16 16 C -0.03 -0.03 6.31 -39.50 -0.25 -0.28 16 17 Cl -0.07 -0.06 27.16 -51.86 -1.41 -1.47 16 18 C -0.11 -0.03 9.83 -39.55 -0.39 -0.42 16 19 C -0.11 0.07 10.05 -39.59 -0.40 -0.33 16 20 C -0.11 0.10 10.05 -39.58 -0.40 -0.30 16 21 C -0.11 0.07 8.61 -39.59 -0.34 -0.27 16 22 C -0.14 0.12 7.25 -25.92 -0.19 -0.07 16 23 C -0.11 -0.18 6.87 30.01 0.21 0.02 16 24 Cl 0.03 0.08 27.20 -51.86 -1.41 -1.33 16 25 S 0.24 -0.26 20.19 -107.50 -2.17 -2.43 16 26 H 0.38 -2.12 8.70 45.56 0.40 -1.72 16 27 H 0.13 -0.30 7.96 -51.93 -0.41 -0.72 16 28 H -0.23 0.09 7.11 56.52 0.40 0.49 16 29 H -0.23 -0.06 7.11 56.52 0.40 0.34 16 30 H 0.16 -0.45 7.10 -52.49 -0.37 -0.82 16 31 H 0.40 -0.94 7.24 -40.82 -0.30 -1.23 16 32 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 33 H 0.10 -0.22 7.72 -51.93 -0.40 -0.62 16 34 H 0.13 -0.12 8.06 -52.49 -0.42 -0.54 16 35 H 0.13 -0.32 8.06 -52.49 -0.42 -0.75 16 36 H 0.13 -0.35 8.06 -52.49 -0.42 -0.77 16 37 H 0.13 -0.31 6.66 -52.48 -0.35 -0.66 16 38 H 0.10 -0.14 6.31 -51.93 -0.33 -0.47 16 39 H 0.08 0.02 8.14 -51.93 -0.42 -0.40 16 LS Contribution 370.13 15.07 5.58 5.58 Total: 0.00 -6.93 370.13 -13.46 -20.38 By element: Atomic # 1 Polarization: -5.37 SS G_CDS: -3.80 Total: -9.18 kcal Atomic # 6 Polarization: 2.12 SS G_CDS: -4.32 Total: -2.20 kcal Atomic # 7 Polarization: 0.17 SS G_CDS: -0.28 Total: -0.11 kcal Atomic # 8 Polarization: -1.98 SS G_CDS: -0.38 Total: -2.36 kcal Atomic # 14 Polarization: -1.62 SS G_CDS: -5.26 Total: -6.88 kcal Atomic # 16 Polarization: -0.26 SS G_CDS: -2.17 Total: -2.43 kcal Atomic # 17 Polarization: 0.02 SS G_CDS: -2.82 Total: -2.80 kcal Total LS contribution 5.58 Total: 5.58 kcal Total: -6.93 -13.46 -20.38 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10565092_13431040.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 32.210 kcal (2) G-P(sol) polarization free energy of solvation -6.925 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 25.284 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.456 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.382 kcal (6) G-S(sol) free energy of system = (1) + (5) 11.828 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds