Wall clock time and date at job start Sat Mar 6 2021 13:15:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86303 * 109.46840 * 2 1 4 4 C 1.50703 * 109.47367 * 119.99515 * 2 1 3 5 5 C 1.34183 * 125.43092 * 65.00370 * 4 2 1 6 6 C 1.47027 * 105.94872 * 180.02562 * 5 4 2 7 7 C 1.47375 * 127.18861 * 180.02562 * 6 5 4 8 8 O 1.21614 * 120.00136 * 359.97438 * 7 6 5 9 9 N 1.34775 * 119.99812 * 179.97438 * 7 6 5 10 10 C 1.46509 * 119.99981 * 180.02562 * 9 7 6 11 11 H 1.08998 * 112.90500 * 23.74753 * 10 9 7 12 12 C 1.53781 * 113.61365 * 155.00367 * 10 9 7 13 13 C 1.53775 * 87.08210 * 89.11341 * 12 10 9 14 14 H 1.08998 * 113.61634 * 270.79568 * 13 12 10 15 15 C 1.50699 * 113.61211 * 139.98039 * 13 12 10 16 16 C 1.38333 * 120.00617 * 119.99939 * 15 13 12 17 17 Cl 1.73599 * 120.01540 * 359.97438 * 16 15 13 18 18 C 1.38380 * 119.97335 * 179.71986 * 16 15 13 19 19 C 1.38196 * 119.98523 * 0.28219 * 18 16 15 20 20 C 1.38269 * 120.01466 * 0.02562 * 19 18 16 21 21 C 1.38219 * 120.02322 * 0.02562 * 20 19 18 22 22 C 1.53784 * 87.08396 * 25.43188 * 13 12 10 23 23 C 1.36412 * 105.61828 * 0.26190 * 6 5 4 24 24 O 1.33660 * 108.39648 * 359.57502 * 23 6 5 25 25 H 0.96699 * 114.00044 * 60.00165 * 1 2 3 26 26 H 1.08997 * 109.47495 * 240.00115 * 2 1 3 27 27 H 1.48503 * 109.99994 * 59.99801 * 3 2 1 28 28 H 1.48494 * 110.00078 * 181.31570 * 3 2 1 29 29 H 1.07992 * 127.02744 * 0.02562 * 5 4 2 30 30 H 0.96997 * 120.00350 * 0.02562 * 9 7 6 31 31 H 1.08998 * 113.61649 * 334.55990 * 12 10 9 32 32 H 1.09001 * 113.68602 * 203.67637 * 12 10 9 33 33 H 1.08002 * 120.00689 * 180.25483 * 18 16 15 34 34 H 1.08003 * 119.99170 * 179.97438 * 19 18 16 35 35 H 1.07992 * 119.98515 * 179.97438 * 20 19 18 36 36 H 1.07997 * 119.99186 * 179.97438 * 21 20 19 37 37 H 1.09001 * 113.61149 * 89.11327 * 22 13 12 38 38 H 1.09000 * 113.61608 * 220.01720 * 22 13 12 39 39 H 1.08000 * 125.80189 * 179.74184 * 23 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7103 1.2305 5 6 1.7552 -2.0122 1.5037 6 6 2.4121 -2.2459 2.7981 7 6 2.5002 -3.5190 3.5353 8 8 1.9933 -4.5243 3.0755 9 7 3.1426 -3.5691 4.7191 10 6 3.2308 -4.8348 5.4517 11 1 3.1280 -5.7068 4.8059 12 6 4.4352 -4.9123 6.4046 13 6 3.5255 -4.2926 7.4785 14 1 3.5417 -3.2028 7.4885 15 6 3.7125 -4.8932 8.8479 16 6 4.1090 -4.0944 9.9054 17 17 4.3919 -2.4000 9.6554 18 6 4.2749 -4.6455 11.1638 19 6 4.0501 -5.9946 11.3622 20 6 3.6600 -6.7937 10.3034 21 6 3.4952 -6.2440 9.0460 22 6 2.3377 -4.8859 6.7026 23 6 2.9182 -1.0370 3.1767 24 8 2.6260 -0.1417 2.2283 25 1 -0.3933 0.4417 -0.7650 26 1 1.7924 -0.5138 -0.8899 27 1 1.5613 2.4679 1.2085 28 1 3.5345 1.7704 -0.0320 29 1 1.2368 -2.7396 0.8968 30 1 3.5466 -2.7672 5.0860 31 1 5.2656 -4.2698 6.1120 32 1 4.7483 -5.9312 6.6326 33 1 4.5804 -4.0215 11.9907 34 1 4.1799 -6.4249 12.3442 35 1 3.4849 -7.8480 10.4588 36 1 3.1909 -6.8687 8.2193 37 1 2.0763 -5.8980 7.0114 38 1 1.4748 -4.2220 6.6505 39 1 3.4648 -0.8379 4.0866 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10565092_13456056.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:15:09 Heat of formation + Delta-G solvation = 2.683727 kcal Electronic energy + Delta-G solvation = -25042.396644 eV Core-core repulsion = 21138.235420 eV Total energy + Delta-G solvation = -3904.161223 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 334.080 amu Computer time = 0.71 seconds Orbital eigenvalues (eV) -43.75091 -41.63872 -40.25946 -38.78768 -37.97359 -37.44580 -34.76537 -33.85908 -32.24012 -31.76758 -31.47322 -26.97652 -26.84938 -26.34402 -24.90166 -23.73155 -22.65122 -22.23074 -21.03856 -20.27106 -18.95332 -18.72423 -18.39818 -17.39795 -17.20674 -17.06637 -16.66709 -16.45453 -16.01928 -15.86820 -15.77982 -15.21961 -15.08439 -14.84969 -14.79110 -14.43553 -14.16039 -14.12166 -13.74557 -13.60716 -13.45100 -13.07242 -12.78224 -12.71523 -12.52883 -12.25407 -12.10324 -11.85093 -11.59353 -11.35327 -11.05915 -10.88486 -10.56142 -10.16003 -9.92072 -9.81415 -9.65703 -5.13961 0.10030 0.19098 0.19929 0.86240 1.09345 1.12926 1.53307 1.63478 1.96621 1.97336 2.31768 2.53577 3.19581 3.30652 3.49013 3.50606 3.55341 3.59191 3.73908 3.82917 3.85046 3.95672 4.03154 4.15652 4.26448 4.28722 4.33792 4.54475 4.57445 4.59558 4.62396 4.71982 4.77306 4.81351 4.86514 4.91907 5.02311 5.19453 5.20671 5.33168 5.38957 5.52049 5.74191 5.81994 6.39668 6.43583 7.17594 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.543 6.543 2 C -0.036 4.036 3 Si 0.712 3.288 4 C -0.016 4.016 5 C -0.116 4.116 6 C -0.235 4.235 7 C 0.593 3.407 8 O -0.527 6.527 9 N -0.711 5.711 10 C 0.122 3.878 11 H 0.109 0.891 12 C -0.133 4.133 13 C -0.082 4.082 14 H 0.104 0.896 15 C -0.062 4.062 16 C -0.033 4.033 17 Cl -0.069 7.069 18 C -0.108 4.108 19 C -0.111 4.111 20 C -0.111 4.111 21 C -0.106 4.106 22 C -0.143 4.143 23 C 0.031 3.969 24 O -0.173 6.173 25 H 0.391 0.609 26 H 0.096 0.904 27 H -0.249 1.249 28 H -0.253 1.253 29 H 0.165 0.835 30 H 0.398 0.602 31 H 0.078 0.922 32 H 0.101 0.899 33 H 0.133 0.867 34 H 0.132 0.868 35 H 0.130 0.870 36 H 0.133 0.867 37 H 0.097 0.903 38 H 0.077 0.923 39 H 0.214 0.786 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.516 1.765 -0.880 2.487 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.351 6.351 2 C -0.146 4.146 3 Si 0.611 3.389 4 C -0.064 4.064 5 C -0.136 4.136 6 C -0.240 4.240 7 C 0.381 3.619 8 O -0.404 6.404 9 N -0.362 5.362 10 C 0.017 3.983 11 H 0.127 0.873 12 C -0.171 4.171 13 C -0.100 4.100 14 H 0.123 0.877 15 C -0.063 4.063 16 C -0.060 4.060 17 Cl -0.040 7.040 18 C -0.127 4.127 19 C -0.129 4.129 20 C -0.129 4.129 21 C -0.124 4.124 22 C -0.181 4.181 23 C -0.039 4.039 24 O -0.070 6.070 25 H 0.240 0.760 26 H 0.114 0.886 27 H -0.173 1.173 28 H -0.177 1.177 29 H 0.182 0.818 30 H 0.233 0.767 31 H 0.097 0.903 32 H 0.119 0.881 33 H 0.151 0.849 34 H 0.150 0.850 35 H 0.148 0.852 36 H 0.151 0.849 37 H 0.116 0.884 38 H 0.095 0.905 39 H 0.230 0.770 Dipole moment (debyes) X Y Z Total from point charges 1.813 1.765 -0.284 2.546 hybrid contribution 0.273 -0.200 0.681 0.760 sum 2.086 1.564 0.396 2.637 Atomic orbital electron populations 1.86474 1.16314 1.82035 1.50234 1.23823 0.86233 1.11798 0.92718 0.95133 0.80822 0.76059 0.86923 1.21181 1.01331 0.92210 0.91637 1.22505 1.00530 0.95289 0.95280 1.21495 1.09128 0.94197 0.99171 1.17204 0.77695 0.87047 0.79986 1.90818 1.46123 1.35552 1.67858 1.45493 1.57651 1.11956 1.21140 1.21838 0.96408 0.87523 0.92536 0.87267 1.23417 0.96631 1.02756 0.94298 1.21741 0.97709 1.00658 0.89883 0.87744 1.19551 0.99089 0.93398 0.94215 1.20861 1.04652 0.85362 0.95124 1.98369 1.94641 1.14098 1.96902 1.21108 1.00222 0.95808 0.95567 1.21180 0.99087 0.92963 0.99700 1.21299 0.98483 1.00454 0.92673 1.21019 0.99899 0.93713 0.97780 1.23578 0.97089 1.02497 0.94939 1.24476 0.99778 0.86821 0.92823 1.83705 1.57690 1.39216 1.26344 0.75982 0.88626 1.17343 1.17728 0.81777 0.76707 0.90302 0.88108 0.84866 0.84972 0.85179 0.84892 0.88431 0.90464 0.76992 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.14 12.86 -35.23 -0.45 -0.32 16 2 C -0.04 0.02 2.96 36.01 0.11 0.12 16 3 Si 0.71 -1.00 32.09 -169.99 -5.46 -6.46 16 4 C -0.02 -0.04 6.22 -35.74 -0.22 -0.26 16 5 C -0.12 -0.40 10.90 -37.45 -0.41 -0.81 16 6 C -0.24 -0.62 6.31 -103.28 -0.65 -1.27 16 7 C 0.59 2.01 7.81 -12.54 -0.10 1.91 16 8 O -0.53 -3.86 16.58 5.27 0.09 -3.77 16 9 N -0.71 0.04 5.25 -54.10 -0.28 -0.24 16 10 C 0.12 -0.03 4.32 -67.11 -0.29 -0.32 16 11 H 0.11 0.13 7.47 -51.93 -0.39 -0.26 16 12 C -0.13 0.23 7.29 -25.92 -0.19 0.04 16 13 C -0.08 0.08 3.64 -90.96 -0.33 -0.25 16 14 H 0.10 -0.11 6.57 -51.93 -0.34 -0.45 16 15 C -0.06 -0.01 5.29 -104.59 -0.55 -0.56 16 16 C -0.03 -0.03 6.31 -39.49 -0.25 -0.28 16 17 Cl -0.07 -0.06 27.16 -51.86 -1.41 -1.47 16 18 C -0.11 -0.03 9.83 -39.54 -0.39 -0.42 16 19 C -0.11 0.07 10.05 -39.59 -0.40 -0.33 16 20 C -0.11 0.10 10.05 -39.58 -0.40 -0.30 16 21 C -0.11 0.07 8.59 -39.59 -0.34 -0.27 16 22 C -0.14 0.09 7.25 -25.92 -0.19 -0.09 16 23 C 0.03 0.01 11.61 30.07 0.35 0.36 16 24 O -0.17 -0.44 8.90 7.64 0.07 -0.37 16 25 H 0.39 -2.27 8.74 45.56 0.40 -1.87 16 26 H 0.10 -0.26 7.96 -51.93 -0.41 -0.68 16 27 H -0.25 -0.59 7.11 56.52 0.40 -0.19 16 28 H -0.25 -0.34 7.11 56.52 0.40 0.06 16 29 H 0.16 0.53 8.06 -52.49 -0.42 0.11 16 30 H 0.40 -1.11 7.67 -40.82 -0.31 -1.43 16 31 H 0.08 -0.16 8.14 -51.93 -0.42 -0.59 16 32 H 0.10 -0.22 7.71 -51.93 -0.40 -0.62 16 33 H 0.13 -0.12 8.06 -52.49 -0.42 -0.54 16 34 H 0.13 -0.33 8.06 -52.48 -0.42 -0.75 16 35 H 0.13 -0.35 8.06 -52.49 -0.42 -0.78 16 36 H 0.13 -0.31 6.68 -52.49 -0.35 -0.66 16 37 H 0.10 -0.13 6.33 -51.93 -0.33 -0.46 16 38 H 0.08 0.03 8.14 -51.93 -0.42 -0.39 16 39 H 0.21 -0.93 7.47 -52.49 -0.39 -1.32 16 LS Contribution 350.62 15.07 5.28 5.28 Total: 0.00 -10.21 350.62 -10.67 -20.88 By element: Atomic # 1 Polarization: -6.57 SS G_CDS: -4.26 Total: -10.83 kcal Atomic # 6 Polarization: 1.53 SS G_CDS: -4.25 Total: -2.72 kcal Atomic # 7 Polarization: 0.04 SS G_CDS: -0.28 Total: -0.24 kcal Atomic # 8 Polarization: -4.16 SS G_CDS: -0.30 Total: -4.46 kcal Atomic # 14 Polarization: -1.00 SS G_CDS: -5.46 Total: -6.46 kcal Atomic # 17 Polarization: -0.06 SS G_CDS: -1.41 Total: -1.47 kcal Total LS contribution 5.28 Total: 5.28 kcal Total: -10.21 -10.67 -20.88 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10565092_13456056.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 23.567 kcal (2) G-P(sol) polarization free energy of solvation -10.208 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 13.359 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.675 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.883 kcal (6) G-S(sol) free energy of system = (1) + (5) 2.684 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds