Wall clock time and date at job start Sat Mar 6 2021 13:15:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86298 * 109.47417 * 2 1 4 4 C 1.50701 * 109.47083 * 239.99574 * 2 1 3 5 5 C 1.34855 * 125.88871 * 120.02617 * 4 2 1 6 6 C 1.40886 * 107.41902 * 179.97438 * 5 4 2 7 7 C 1.34853 * 107.41488 * 359.97438 * 6 5 4 8 8 C 1.50701 * 125.88789 * 180.02562 * 7 6 5 9 9 C 1.50703 * 109.47064 * 85.02873 * 8 7 6 10 10 O 1.21278 * 119.99985 * 359.97438 * 9 8 7 11 11 N 1.34777 * 120.00161 * 180.02562 * 9 8 7 12 12 C 1.46496 * 120.00271 * 180.02562 * 11 9 8 13 13 H 1.09003 * 112.84993 * 336.19005 * 12 11 9 14 14 C 1.53781 * 113.61614 * 107.49783 * 12 11 9 15 15 C 1.53778 * 87.07849 * 89.11738 * 14 12 11 16 16 H 1.09010 * 113.61773 * 270.88132 * 15 14 12 17 17 C 1.50707 * 113.69334 * 139.99370 * 15 14 12 18 18 C 1.38321 * 120.00867 * 142.46086 * 17 15 14 19 19 Cl 1.73600 * 120.01434 * 359.95723 * 18 17 15 20 20 C 1.38374 * 119.97089 * 179.97438 * 18 17 15 21 21 C 1.38191 * 119.98806 * 359.97438 * 20 18 17 22 22 C 1.38255 * 120.01182 * 0.02562 * 21 20 18 23 23 C 1.38215 * 120.02935 * 359.74670 * 22 21 20 24 24 C 1.53777 * 87.08604 * 25.43188 * 15 14 12 25 25 N 1.36339 * 125.89463 * 300.31602 * 4 2 1 26 26 H 0.96703 * 114.00019 * 60.00111 * 1 2 3 27 27 H 1.09001 * 109.46948 * 120.00288 * 2 1 3 28 28 H 1.48496 * 109.99963 * 59.99908 * 3 2 1 29 29 H 1.48497 * 110.00144 * 181.31494 * 3 2 1 30 30 H 1.07999 * 126.28938 * 0.02562 * 5 4 2 31 31 H 1.08001 * 126.29011 * 179.97438 * 6 5 4 32 32 H 1.09002 * 109.47060 * 205.02837 * 8 7 6 33 33 H 1.09001 * 109.47380 * 325.02925 * 8 7 6 34 34 H 0.97005 * 119.99463 * 359.97438 * 11 9 8 35 35 H 1.09000 * 113.61467 * 203.66301 * 14 12 11 36 36 H 1.08991 * 113.61330 * 334.57193 * 14 12 11 37 37 H 1.08005 * 120.00391 * 179.97438 * 20 18 17 38 38 H 1.08008 * 119.98969 * 179.97438 * 21 20 18 39 39 H 1.08012 * 119.98497 * 180.02562 * 22 21 20 40 40 H 1.08001 * 119.99807 * 180.27832 * 23 22 21 41 41 H 1.08998 * 113.61996 * 220.01715 * 24 15 14 42 42 H 1.09001 * 113.61655 * 89.11126 * 24 15 14 43 43 H 0.96998 * 125.63811 * 0.02562 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2304 5 6 2.7102 -0.1729 -2.1911 6 6 2.9456 -1.1750 -3.1530 7 6 2.3020 -2.2869 -2.7433 8 6 2.2773 -3.6099 -3.4647 9 6 3.4957 -4.4116 -3.0855 10 8 4.3047 -3.9536 -2.3066 11 7 3.6870 -5.6371 -3.6127 12 6 4.8711 -6.4167 -3.2437 13 1 5.6963 -5.7945 -2.8971 14 6 4.5623 -7.6053 -2.3182 15 6 4.3447 -8.4391 -3.5918 16 1 3.3195 -8.4121 -3.9616 17 6 4.8973 -9.8382 -3.5015 18 6 4.2126 -10.8912 -4.0809 19 17 2.7159 -10.6018 -4.9113 20 6 4.7211 -12.1755 -3.9979 21 6 5.9127 -12.4053 -3.3369 22 6 6.5966 -11.3523 -2.7581 23 6 6.0916 -10.0686 -2.8446 24 6 5.2829 -7.4510 -4.3046 25 7 1.6721 -2.0060 -1.5672 26 1 -0.3933 0.4417 -0.7651 27 1 1.7923 -0.5139 0.8900 28 1 1.5616 2.4678 1.2084 29 1 3.5346 1.7702 -0.0320 30 1 3.0854 0.8394 -2.2176 31 1 3.5334 -1.0716 -4.0531 32 1 1.3789 -4.1598 -3.1845 33 1 2.2766 -3.4370 -4.5409 34 1 3.0401 -6.0032 -4.2360 35 1 5.4169 -7.9300 -1.7245 36 1 3.6586 -7.4724 -1.7236 37 1 4.1867 -12.9982 -4.4498 38 1 6.3094 -13.4078 -3.2718 39 1 7.5281 -11.5324 -2.2419 40 1 6.6286 -9.2458 -2.3961 41 1 4.9609 -7.1935 -5.3136 42 1 6.3345 -7.7334 -4.2540 43 1 1.1316 -2.6262 -1.0534 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10565092_14644196.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:15:14 Heat of formation + Delta-G solvation = 24.192312 kcal Electronic energy + Delta-G solvation = -26636.410592 eV Core-core repulsion = 22675.363093 eV Total energy + Delta-G solvation = -3961.047498 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 347.108 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -42.34776 -41.56073 -40.31313 -38.83917 -37.69012 -37.42854 -34.64782 -33.10210 -31.93384 -31.70579 -31.68585 -29.37185 -26.75345 -26.34946 -25.13357 -23.76680 -22.74286 -22.10435 -21.35704 -21.01792 -20.17048 -18.92790 -18.54619 -17.94742 -17.28336 -16.88865 -16.51786 -16.46290 -16.26764 -16.22130 -15.37644 -15.19169 -15.17432 -14.83492 -14.78683 -14.58555 -14.52882 -14.19665 -14.08038 -13.85177 -13.68085 -13.49385 -13.35531 -12.95692 -12.74753 -12.69546 -12.48952 -12.17834 -12.08791 -12.00139 -11.77469 -11.54133 -11.28017 -11.02157 -10.64916 -10.11442 -9.85473 -9.79834 -9.60272 -8.95797 -4.96456 0.15988 0.26455 1.10498 1.14832 1.26517 1.58246 1.69152 1.85897 1.95346 2.26721 2.50911 2.60787 3.40265 3.50281 3.57703 3.63943 3.67536 3.79081 3.84156 3.93081 4.02313 4.08592 4.15046 4.20774 4.37095 4.38123 4.39269 4.48637 4.60401 4.63725 4.69720 4.73121 4.79405 4.82864 4.89640 4.95592 4.98680 5.12111 5.25598 5.27729 5.29182 5.41335 5.47348 5.60094 5.84354 5.99960 6.13569 6.49629 6.66171 6.70337 7.23417 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.558 6.558 2 C -0.053 4.053 3 Si 0.810 3.190 4 C -0.021 4.021 5 C -0.202 4.202 6 C -0.199 4.199 7 C 0.032 3.968 8 C -0.067 4.067 9 C 0.514 3.486 10 O -0.576 6.576 11 N -0.702 5.702 12 C 0.119 3.881 13 H 0.085 0.915 14 C -0.140 4.140 15 C -0.074 4.074 16 H 0.106 0.894 17 C -0.071 4.071 18 C -0.050 4.050 19 Cl -0.073 7.073 20 C -0.121 4.121 21 C -0.117 4.117 22 C -0.117 4.117 23 C -0.113 4.113 24 C -0.122 4.122 25 N -0.537 5.537 26 H 0.397 0.603 27 H 0.099 0.901 28 H -0.292 1.292 29 H -0.294 1.294 30 H 0.151 0.849 31 H 0.142 0.858 32 H 0.128 0.872 33 H 0.146 0.854 34 H 0.417 0.583 35 H 0.098 0.902 36 H 0.065 0.935 37 H 0.139 0.861 38 H 0.149 0.851 39 H 0.148 0.852 40 H 0.145 0.855 41 H 0.087 0.913 42 H 0.102 0.898 43 H 0.418 0.582 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.489 -2.599 -4.595 5.486 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.366 6.366 2 C -0.163 4.163 3 Si 0.715 3.285 4 C -0.135 4.135 5 C -0.227 4.227 6 C -0.223 4.223 7 C -0.082 4.082 8 C -0.107 4.107 9 C 0.301 3.699 10 O -0.455 6.455 11 N -0.354 5.354 12 C 0.013 3.987 13 H 0.104 0.896 14 C -0.178 4.178 15 C -0.092 4.092 16 H 0.124 0.876 17 C -0.071 4.071 18 C -0.076 4.076 19 Cl -0.045 7.045 20 C -0.140 4.140 21 C -0.135 4.135 22 C -0.135 4.135 23 C -0.131 4.131 24 C -0.160 4.160 25 N -0.132 5.132 26 H 0.248 0.752 27 H 0.117 0.883 28 H -0.220 1.220 29 H -0.221 1.221 30 H 0.169 0.831 31 H 0.159 0.841 32 H 0.146 0.854 33 H 0.163 0.837 34 H 0.254 0.746 35 H 0.117 0.883 36 H 0.084 0.916 37 H 0.157 0.843 38 H 0.167 0.833 39 H 0.165 0.835 40 H 0.163 0.837 41 H 0.105 0.895 42 H 0.121 0.879 43 H 0.255 0.745 Dipole moment (debyes) X Y Z Total from point charges -0.601 -2.070 -3.078 3.757 hybrid contribution -0.422 -1.320 0.232 1.405 sum -1.023 -3.390 -2.845 4.542 Atomic orbital electron populations 1.86438 1.17176 1.82237 1.50713 1.24938 0.85151 1.11314 0.94864 0.93060 0.77336 0.73987 0.84109 1.20976 1.06314 0.86026 1.00138 1.20910 1.04773 1.00777 0.96254 1.20851 1.05679 0.93305 1.02496 1.19902 1.01883 0.96686 0.89688 1.20250 0.96875 0.90220 1.03351 1.21054 0.87657 0.81417 0.79765 1.90754 1.47400 1.70862 1.36444 1.45583 1.25434 1.16536 1.47856 1.21769 0.88638 0.91545 0.96783 0.89646 1.23540 1.02867 0.95198 0.96236 1.21675 1.00414 0.89132 0.98004 0.87566 1.19718 0.95162 0.94491 0.97762 1.21030 0.90089 0.95346 1.01145 1.98359 1.32612 1.96358 1.77124 1.21308 0.97154 0.95382 1.00139 1.21443 0.94272 1.00805 0.97012 1.21590 1.00725 0.92460 0.98681 1.21244 0.94894 0.98170 0.98769 1.23355 1.00678 0.93327 0.98653 1.41878 1.40910 1.11112 1.19341 0.75244 0.88304 1.22012 1.22100 0.83107 0.84062 0.85439 0.83669 0.74607 0.88332 0.91579 0.84272 0.83324 0.83467 0.83708 0.89450 0.87918 0.74452 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.56 12.88 -148.98 -1.92 -2.48 16 2 C -0.05 -0.11 3.08 71.24 0.22 0.11 16 3 Si 0.81 0.02 30.59 68.60 2.10 2.12 16 4 C -0.02 -0.09 6.51 41.08 0.27 0.18 16 5 C -0.20 -0.98 9.37 22.14 0.21 -0.77 16 6 C -0.20 -1.03 10.76 22.14 0.24 -0.79 16 7 C 0.03 0.09 5.66 41.08 0.23 0.32 16 8 C -0.07 0.30 6.24 29.10 0.18 0.48 16 9 C 0.51 0.88 7.82 87.66 0.69 1.57 16 10 O -0.58 -7.26 15.63 -3.02 -0.05 -7.31 16 11 N -0.70 2.53 5.26 -440.04 -2.32 0.21 16 12 C 0.12 -0.19 4.32 45.52 0.20 0.00 16 13 H 0.09 0.27 7.46 -2.39 -0.02 0.25 16 14 C -0.14 0.29 7.26 31.12 0.23 0.51 16 15 C -0.07 0.23 3.64 -11.01 -0.04 0.19 16 16 H 0.11 -0.36 6.57 -2.38 -0.02 -0.38 16 17 C -0.07 0.04 5.29 -19.84 -0.11 -0.07 16 18 C -0.05 -0.06 6.31 22.32 0.14 0.08 16 19 Cl -0.07 -0.08 27.16 -2.72 -0.07 -0.15 16 20 C -0.12 -0.01 9.83 22.29 0.22 0.21 16 21 C -0.12 0.24 10.04 22.26 0.22 0.47 16 22 C -0.12 0.32 10.04 22.27 0.22 0.54 16 23 C -0.11 0.24 8.60 22.26 0.19 0.43 16 24 C -0.12 0.57 7.29 31.12 0.23 0.79 16 25 N -0.54 -1.60 6.07 -171.11 -1.04 -2.64 16 26 H 0.40 -2.74 8.70 -74.06 -0.64 -3.38 16 27 H 0.10 0.39 7.96 -2.39 -0.02 0.37 16 28 H -0.29 -1.76 7.11 99.48 0.71 -1.06 16 29 H -0.29 -1.89 7.11 99.48 0.71 -1.19 16 30 H 0.15 0.21 6.22 -2.91 -0.02 0.19 16 31 H 0.14 0.42 8.06 -2.91 -0.02 0.40 16 32 H 0.13 -1.26 8.14 -2.39 -0.02 -1.28 16 33 H 0.15 -1.43 8.14 -2.39 -0.02 -1.45 16 34 H 0.42 -3.98 8.70 -92.70 -0.81 -4.79 16 35 H 0.10 -0.28 6.34 -2.39 -0.02 -0.29 16 36 H 0.07 -0.01 8.14 -2.39 -0.02 -0.03 16 37 H 0.14 -0.29 8.06 -2.91 -0.02 -0.31 16 38 H 0.15 -0.91 8.06 -2.91 -0.02 -0.94 16 39 H 0.15 -1.00 8.06 -2.90 -0.02 -1.02 16 40 H 0.15 -0.77 6.68 -2.91 -0.02 -0.79 16 41 H 0.09 -0.52 8.14 -2.39 -0.02 -0.54 16 42 H 0.10 -0.52 7.71 -2.39 -0.02 -0.54 16 43 H 0.42 -0.09 8.96 -92.71 -0.83 -0.92 16 Total: 0.00 -22.75 373.99 -0.92 -23.68 By element: Atomic # 1 Polarization: -16.52 SS G_CDS: -1.16 Total: -17.69 kcal Atomic # 6 Polarization: 0.72 SS G_CDS: 3.54 Total: 4.26 kcal Atomic # 7 Polarization: 0.93 SS G_CDS: -3.35 Total: -2.42 kcal Atomic # 8 Polarization: -7.82 SS G_CDS: -1.97 Total: -9.79 kcal Atomic # 14 Polarization: 0.02 SS G_CDS: 2.10 Total: 2.12 kcal Atomic # 17 Polarization: -0.08 SS G_CDS: -0.07 Total: -0.15 kcal Total: -22.75 -0.92 -23.68 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10565092_14644196.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 47.869 kcal (2) G-P(sol) polarization free energy of solvation -22.752 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 25.117 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.924 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.676 kcal (6) G-S(sol) free energy of system = (1) + (5) 24.192 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.00 seconds