Wall clock time and date at job start Sat Mar 6 2021 13:15:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86300 * 109.46973 * 2 1 4 4 C 1.50700 * 109.47318 * 120.00067 * 2 1 3 5 5 C 1.31119 * 118.54842 * 250.00293 * 4 2 1 6 6 N 1.38921 * 121.84869 * 180.38445 * 5 4 2 7 7 C 1.47030 * 118.88297 * 346.68056 * 6 5 4 8 8 C 1.50701 * 109.82049 * 163.20690 * 7 6 5 9 9 O 1.21277 * 120.00099 * 339.99729 * 8 7 6 10 10 N 1.34778 * 119.99998 * 160.00106 * 8 7 6 11 11 C 1.46500 * 119.99919 * 180.02562 * 10 8 7 12 12 H 1.09002 * 112.85132 * 25.33083 * 11 10 8 13 13 C 1.53781 * 113.61711 * 156.52821 * 11 10 8 14 14 C 1.53785 * 87.08277 * 89.19510 * 13 11 10 15 15 H 1.08995 * 113.61449 * 270.88726 * 14 13 11 16 16 C 1.50693 * 113.61331 * 140.06613 * 14 13 11 17 17 C 1.38329 * 120.00826 * 120.00319 * 16 14 13 18 18 Cl 1.73598 * 120.01157 * 359.95171 * 17 16 14 19 19 C 1.38372 * 119.97425 * 179.97438 * 17 16 14 20 20 C 1.38185 * 119.98847 * 359.97438 * 19 17 16 21 21 C 1.38270 * 120.01415 * 0.02562 * 20 19 17 22 22 C 1.38216 * 120.02306 * 359.74369 * 21 20 19 23 23 C 1.53776 * 87.07661 * 25.43397 * 14 13 11 24 24 C 1.53539 * 107.65954 * 43.66688 * 7 6 5 25 25 C 1.50210 * 118.54545 * 69.97875 * 4 2 1 26 26 H 0.96699 * 113.99810 * 299.99711 * 1 2 3 27 27 H 1.09004 * 109.47185 * 240.00110 * 2 1 3 28 28 H 1.48500 * 109.99974 * 178.68105 * 3 2 1 29 29 H 1.48494 * 110.00096 * 300.00317 * 3 2 1 30 30 H 1.07997 * 119.07164 * 0.35797 * 5 4 2 31 31 H 0.97002 * 120.55932 * 166.66073 * 6 5 4 32 32 H 1.09000 * 109.82070 * 284.06221 * 7 6 5 33 33 H 0.96998 * 120.00229 * 359.97438 * 10 8 7 34 34 H 1.08993 * 113.62030 * 203.74957 * 13 11 10 35 35 H 1.09006 * 113.61033 * 334.65409 * 13 11 10 36 36 H 1.08003 * 120.00904 * 179.97438 * 19 17 16 37 37 H 1.08009 * 119.99599 * 179.97438 * 20 19 17 38 38 H 1.08003 * 119.98362 * 180.02562 * 21 20 19 39 39 H 1.07995 * 119.99392 * 180.27798 * 22 21 20 40 40 H 1.09003 * 113.61687 * 220.01420 * 23 14 13 41 41 H 1.09009 * 113.61565 * 89.11769 * 23 14 13 42 42 H 1.08995 * 109.62122 * 58.76930 * 24 7 6 43 43 H 1.09000 * 109.61993 * 179.32933 * 24 7 6 44 44 H 1.08996 * 109.32467 * 280.22978 * 25 4 2 45 45 H 1.08996 * 109.32683 * 39.88471 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 2.5117 -0.0028 2.1695 6 7 3.0068 -0.5881 3.3281 7 6 2.6222 -1.9713 3.6453 8 6 3.5613 -2.5387 4.6783 9 8 4.6506 -2.0338 4.8500 10 7 3.1908 -3.6072 5.4114 11 6 4.1036 -4.1584 6.4160 12 1 4.8139 -3.4220 6.7920 13 6 3.3925 -4.9509 7.5257 14 6 3.5469 -6.1915 6.6301 15 1 2.7157 -6.3383 5.9405 16 6 3.9057 -7.4429 7.3891 17 6 3.0661 -8.5416 7.3481 18 17 1.5984 -8.4787 6.4232 19 6 3.3965 -9.6905 8.0448 20 6 4.5650 -9.7400 8.7808 21 6 5.4039 -8.6416 8.8215 22 6 5.0767 -7.4953 8.1219 23 6 4.7567 -5.4856 5.9954 24 6 2.7171 -2.7899 2.3499 25 6 1.7448 -2.1977 1.3270 26 1 -0.3933 0.4417 0.7651 27 1 1.7924 -0.5138 -0.8900 28 1 3.5346 1.7703 0.0321 29 1 1.5614 2.4679 -1.2084 30 1 2.6077 1.0648 2.0384 31 1 3.5966 -0.0926 3.9177 32 1 1.6001 -1.9932 4.0235 33 1 2.3195 -4.0108 5.2744 34 1 3.9610 -5.0088 8.4538 35 1 2.3562 -4.6508 7.6809 36 1 2.7413 -10.5485 8.0135 37 1 4.8228 -10.6366 9.3250 38 1 6.3172 -8.6810 9.3965 39 1 5.7345 -6.6392 8.1504 40 1 4.8218 -5.6172 4.9153 41 1 5.6983 -5.6897 6.5052 42 1 3.7336 -2.7409 1.9596 43 1 2.4491 -3.8270 2.5518 44 1 0.7217 -2.4137 1.6347 45 1 1.9314 -2.6488 0.3525 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10565092_15413834.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:15:17 Heat of formation + Delta-G solvation = 2.042219 kcal Electronic energy + Delta-G solvation = -27754.353631 eV Core-core repulsion = 23765.034154 eV Total energy + Delta-G solvation = -3989.319477 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 349.123 amu Computer time = 1.07 seconds Orbital eigenvalues (eV) -41.81198 -40.88479 -39.67238 -38.74778 -37.41387 -37.30010 -34.78127 -33.20979 -32.96439 -31.67919 -31.65875 -27.73806 -26.73983 -26.12524 -25.34660 -23.93589 -23.56853 -22.64101 -21.90606 -20.22161 -19.40182 -18.99264 -18.39932 -17.88642 -17.23507 -16.84419 -16.67035 -16.43412 -16.25223 -15.97179 -15.72604 -15.29901 -15.22452 -15.12534 -14.78080 -14.76080 -14.49363 -14.30082 -14.10563 -14.07402 -13.51363 -13.37079 -13.03660 -12.98997 -12.93777 -12.69274 -12.47907 -12.24970 -12.16379 -11.93668 -11.89773 -11.76992 -11.52519 -11.27373 -11.26505 -10.91197 -10.17721 -10.14640 -9.84021 -9.58567 -8.45494 -5.00782 0.17705 0.28292 1.16713 1.33317 1.40119 1.45372 1.63877 1.85903 2.00797 2.62427 2.64074 3.40639 3.49102 3.59708 3.63100 3.71486 3.82425 3.85528 3.89662 3.95056 4.02499 4.10478 4.16635 4.31177 4.38573 4.39738 4.44381 4.60874 4.62262 4.64901 4.71538 4.74264 4.75249 4.82531 4.89690 4.97527 4.99514 5.00930 5.11625 5.21706 5.29110 5.29554 5.40449 5.48916 5.56333 5.58564 5.86194 6.24020 6.43702 6.82509 6.95823 7.08452 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.564 6.564 2 C -0.046 4.046 3 Si 0.757 3.243 4 C -0.291 4.291 5 C 0.147 3.853 6 N -0.736 5.736 7 C 0.140 3.860 8 C 0.517 3.483 9 O -0.571 6.571 10 N -0.695 5.695 11 C 0.119 3.881 12 H 0.092 0.908 13 C -0.121 4.121 14 C -0.076 4.076 15 H 0.105 0.895 16 C -0.070 4.070 17 C -0.050 4.050 18 Cl -0.074 7.074 19 C -0.122 4.122 20 C -0.118 4.118 21 C -0.117 4.117 22 C -0.112 4.112 23 C -0.140 4.140 24 C -0.123 4.123 25 C -0.051 4.051 26 H 0.392 0.608 27 H 0.090 0.910 28 H -0.296 1.296 29 H -0.307 1.307 30 H 0.149 0.851 31 H 0.408 0.592 32 H 0.116 0.884 33 H 0.417 0.583 34 H 0.105 0.895 35 H 0.087 0.913 36 H 0.138 0.862 37 H 0.148 0.852 38 H 0.148 0.852 39 H 0.147 0.853 40 H 0.065 0.935 41 H 0.101 0.899 42 H 0.053 0.947 43 H 0.097 0.903 44 H 0.078 0.922 45 H 0.062 0.938 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.654 -1.703 6.060 6.509 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.371 6.371 2 C -0.157 4.157 3 Si 0.666 3.334 4 C -0.302 4.302 5 C 0.026 3.974 6 N -0.369 5.369 7 C 0.031 3.969 8 C 0.303 3.697 9 O -0.449 6.449 10 N -0.347 5.347 11 C 0.013 3.987 12 H 0.110 0.890 13 C -0.159 4.159 14 C -0.095 4.095 15 H 0.123 0.877 16 C -0.071 4.071 17 C -0.077 4.077 18 Cl -0.045 7.045 19 C -0.141 4.141 20 C -0.136 4.136 21 C -0.134 4.134 22 C -0.130 4.130 23 C -0.178 4.178 24 C -0.161 4.161 25 C -0.088 4.088 26 H 0.242 0.758 27 H 0.107 0.893 28 H -0.223 1.223 29 H -0.236 1.236 30 H 0.166 0.834 31 H 0.245 0.755 32 H 0.134 0.866 33 H 0.254 0.746 34 H 0.124 0.876 35 H 0.106 0.894 36 H 0.156 0.844 37 H 0.166 0.834 38 H 0.166 0.834 39 H 0.165 0.835 40 H 0.084 0.916 41 H 0.120 0.880 42 H 0.072 0.928 43 H 0.115 0.885 44 H 0.096 0.904 45 H 0.081 0.919 Dipole moment (debyes) X Y Z Total from point charges -0.515 -1.186 5.173 5.332 hybrid contribution -0.006 -0.750 -0.473 0.887 sum -0.520 -1.936 4.700 5.110 Atomic orbital electron populations 1.86436 1.18141 1.82109 1.50459 1.24759 0.84704 1.08742 0.97507 0.94384 0.77498 0.76401 0.85122 1.20969 1.14507 0.96573 0.98108 1.20488 0.94610 0.96361 0.85933 1.44383 1.54719 1.12591 1.25204 1.21090 0.97959 0.83891 0.93930 1.20865 0.87331 0.80052 0.81461 1.90724 1.24123 1.61307 1.68773 1.45538 1.20490 1.30941 1.37721 1.21822 0.92822 0.94741 0.89271 0.89016 1.23356 1.02540 0.92825 0.97178 1.21692 0.99538 0.90587 0.97634 0.87690 1.19715 0.94423 0.94354 0.98581 1.21042 0.90260 0.96683 0.99685 1.98361 1.35045 1.98463 1.72657 1.21299 0.98426 0.97136 0.97195 1.21442 0.93577 0.99937 0.98635 1.21596 1.00372 0.92861 0.98616 1.21255 0.95881 0.99400 0.96443 1.23553 0.98082 0.94832 1.01377 1.21837 1.00411 0.99796 0.94099 1.19932 0.99033 0.91463 0.98411 0.75842 0.89257 1.22332 1.23606 0.83437 0.75510 0.86622 0.74603 0.87620 0.89443 0.84389 0.83411 0.83440 0.83493 0.91575 0.88038 0.92821 0.88474 0.90389 0.91916 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.81 12.88 -148.98 -1.92 -2.73 16 2 C -0.05 -0.05 2.81 71.24 0.20 0.15 16 3 Si 0.76 -0.11 29.73 68.60 2.04 1.93 16 4 C -0.29 0.02 5.37 -16.76 -0.09 -0.07 16 5 C 0.15 -0.23 9.62 83.41 0.80 0.58 16 6 N -0.74 0.60 5.46 -329.01 -1.80 -1.19 16 7 C 0.14 -0.41 3.36 44.33 0.15 -0.26 16 8 C 0.52 0.22 7.08 87.66 0.62 0.84 16 9 O -0.57 -5.15 15.72 -3.02 -0.05 -5.20 16 10 N -0.70 3.26 5.27 -440.04 -2.32 0.94 16 11 C 0.12 -0.42 4.30 45.52 0.20 -0.22 16 12 H 0.09 0.01 7.50 -2.39 -0.02 -0.01 16 13 C -0.12 0.75 7.29 31.12 0.23 0.98 16 14 C -0.08 0.32 3.65 -11.02 -0.04 0.28 16 15 H 0.11 -0.42 6.57 -2.39 -0.02 -0.44 16 16 C -0.07 0.09 5.29 -19.84 -0.11 -0.01 16 17 C -0.05 -0.04 6.31 22.32 0.14 0.10 16 18 Cl -0.07 -0.06 27.16 -2.72 -0.07 -0.14 16 19 C -0.12 0.03 9.83 22.29 0.22 0.25 16 20 C -0.12 0.29 10.05 22.26 0.22 0.52 16 21 C -0.12 0.40 10.05 22.27 0.22 0.62 16 22 C -0.11 0.35 8.63 22.27 0.19 0.54 16 23 C -0.14 0.48 7.26 31.12 0.23 0.71 16 24 C -0.12 0.26 5.47 30.79 0.17 0.43 16 25 C -0.05 0.04 5.85 29.71 0.17 0.21 16 26 H 0.39 -2.77 8.70 -74.06 -0.64 -3.42 16 27 H 0.09 0.33 7.96 -2.38 -0.02 0.31 16 28 H -0.30 -1.69 7.11 99.48 0.71 -0.99 16 29 H -0.31 -2.49 7.11 99.48 0.71 -1.78 16 30 H 0.15 -0.81 4.49 -2.91 -0.01 -0.82 16 31 H 0.41 -0.05 8.12 -92.71 -0.75 -0.80 16 32 H 0.12 -0.86 8.14 -2.39 -0.02 -0.88 16 33 H 0.42 -4.08 8.71 -92.71 -0.81 -4.89 16 34 H 0.11 -0.73 7.73 -2.39 -0.02 -0.75 16 35 H 0.09 -0.64 8.14 -2.38 -0.02 -0.66 16 36 H 0.14 -0.30 8.06 -2.91 -0.02 -0.33 16 37 H 0.15 -0.95 8.06 -2.91 -0.02 -0.98 16 38 H 0.15 -1.11 8.06 -2.91 -0.02 -1.14 16 39 H 0.15 -0.99 6.65 -2.91 -0.02 -1.01 16 40 H 0.07 -0.07 8.14 -2.39 -0.02 -0.09 16 41 H 0.10 -0.46 6.31 -2.38 -0.02 -0.47 16 42 H 0.05 0.15 8.14 -2.39 -0.02 0.13 16 43 H 0.10 -0.58 8.14 -2.39 -0.02 -0.60 16 44 H 0.08 -0.18 8.14 -2.39 -0.02 -0.20 16 45 H 0.06 0.07 8.14 -2.39 -0.02 0.05 16 Total: 0.00 -18.81 376.54 -1.71 -20.51 By element: Atomic # 1 Polarization: -18.64 SS G_CDS: -1.11 Total: -19.75 kcal Atomic # 6 Polarization: 2.10 SS G_CDS: 3.53 Total: 5.63 kcal Atomic # 7 Polarization: 3.86 SS G_CDS: -4.12 Total: -0.26 kcal Atomic # 8 Polarization: -5.96 SS G_CDS: -1.97 Total: -7.93 kcal Atomic # 14 Polarization: -0.11 SS G_CDS: 2.04 Total: 1.93 kcal Atomic # 17 Polarization: -0.06 SS G_CDS: -0.07 Total: -0.14 kcal Total: -18.81 -1.71 -20.51 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10565092_15413834.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 22.553 kcal (2) G-P(sol) polarization free energy of solvation -18.805 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 3.747 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.705 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.510 kcal (6) G-S(sol) free energy of system = (1) + (5) 2.042 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.07 seconds