Wall clock time and date at job start Sat Mar 6 2021 13:15:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86303 * 109.47006 * 2 1 4 4 C 1.50703 * 109.47345 * 119.99837 * 2 1 3 5 5 C 1.31113 * 118.54497 * 249.98480 * 4 2 1 6 6 N 1.38924 * 121.84621 * 180.42756 * 5 4 2 7 7 C 1.47036 * 118.88388 * 346.68220 * 6 5 4 8 8 C 1.53538 * 107.65800 * 43.66268 * 7 6 5 9 9 C 1.50209 * 118.54286 * 69.99949 * 4 2 1 10 10 C 1.50697 * 109.32887 * 39.67046 * 9 4 2 11 11 O 1.21286 * 119.99998 * 120.85976 * 10 9 4 12 12 N 1.34775 * 120.00136 * 300.86030 * 10 9 4 13 13 C 1.46497 * 120.00126 * 180.02562 * 12 10 9 14 14 H 1.09002 * 112.84935 * 25.32833 * 13 12 10 15 15 C 1.53786 * 113.61643 * 156.52505 * 13 12 10 16 16 C 1.53782 * 87.07909 * 89.19525 * 15 13 12 17 17 H 1.08997 * 113.61784 * 270.88529 * 16 15 13 18 18 C 1.50707 * 113.61258 * 140.06349 * 16 15 13 19 19 C 1.38330 * 120.00541 * 119.72729 * 18 16 15 20 20 Cl 1.73597 * 120.01334 * 359.97438 * 19 18 16 21 21 C 1.38372 * 119.97276 * 179.70089 * 19 18 16 22 22 C 1.38204 * 119.98481 * 0.59896 * 21 19 18 23 23 C 1.38264 * 120.01005 * 359.69942 * 22 21 19 24 24 C 1.38218 * 120.02847 * 359.97438 * 23 22 21 25 25 C 1.53781 * 113.61305 * 254.13352 * 13 12 10 26 26 H 0.96697 * 114.00352 * 299.99728 * 1 2 3 27 27 H 1.09002 * 109.47255 * 240.00047 * 2 1 3 28 28 H 1.48496 * 110.00347 * 178.68111 * 3 2 1 29 29 H 1.48501 * 110.00035 * 300.00202 * 3 2 1 30 30 H 1.08001 * 119.08011 * 0.42058 * 5 4 2 31 31 H 0.96997 * 120.56359 * 166.65740 * 6 5 4 32 32 H 1.09000 * 109.81785 * 284.12627 * 7 6 5 33 33 H 1.08997 * 109.82274 * 163.20901 * 7 6 5 34 34 H 1.09004 * 109.62237 * 179.33231 * 8 7 6 35 35 H 1.09000 * 109.77727 * 58.86712 * 8 7 6 36 36 H 1.08994 * 109.19086 * 280.09478 * 9 4 2 37 37 H 0.97006 * 119.99816 * 359.97438 * 12 10 9 38 38 H 1.08993 * 113.61491 * 203.74894 * 15 13 12 39 39 H 1.09000 * 113.61138 * 334.65232 * 15 13 12 40 40 H 1.08000 * 120.00762 * 180.31852 * 21 19 18 41 41 H 1.08002 * 119.98991 * 179.67724 * 22 21 19 42 42 H 1.07997 * 119.97835 * 179.97438 * 23 22 21 43 43 H 1.08001 * 119.99135 * 180.02562 * 24 23 22 44 44 H 1.09001 * 113.61695 * 25.34675 * 25 13 12 45 45 H 1.08997 * 113.61223 * 156.25258 * 25 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 2.5119 -0.0028 2.1693 6 7 3.0079 -0.5881 3.3275 7 6 2.6239 -1.9715 3.6447 8 6 2.7182 -2.7898 2.3490 9 6 1.7452 -2.1978 1.3269 10 6 1.9984 -2.8206 -0.0218 11 8 2.8699 -3.6542 -0.1509 12 7 1.2565 -2.4513 -1.0846 13 6 1.5022 -3.0571 -2.3956 14 1 1.9548 -4.0464 -2.3266 15 6 0.2885 -2.9994 -3.3383 16 6 0.8202 -1.6362 -3.8115 17 1 0.4513 -0.7957 -3.2236 18 6 0.6829 -1.4170 -5.2962 19 6 -0.0731 -0.3610 -5.7726 20 17 -0.8643 0.7117 -4.6605 21 6 -0.1936 -0.1568 -7.1358 22 6 0.4311 -1.0151 -8.0207 23 6 1.1814 -2.0740 -7.5439 24 6 1.3077 -2.2746 -6.1822 25 6 2.2176 -2.1200 -3.3830 26 1 -0.3934 0.4416 0.7650 27 1 1.7924 -0.5138 -0.8900 28 1 3.5345 1.7704 0.0321 29 1 1.5614 2.4679 -1.2085 30 1 2.6074 1.0650 2.0386 31 1 3.5979 -0.0927 3.9168 32 1 1.6017 -1.9939 4.0224 33 1 3.3037 -2.3818 4.3914 34 1 2.4507 -3.8271 2.5509 35 1 3.7342 -2.7436 1.9568 36 1 0.7223 -2.4114 1.6367 37 1 0.5592 -1.7848 -0.9814 38 1 0.3007 -3.7658 -4.1132 39 1 -0.6667 -2.9384 -2.8169 40 1 -0.7794 0.6706 -7.5083 41 1 0.3328 -0.8588 -9.0848 42 1 1.6690 -2.7447 -8.2359 43 1 1.8943 -3.1017 -5.8105 44 1 2.8174 -1.3500 -2.8977 45 1 2.7581 -2.6455 -4.1702 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10565092_15608500.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:15:21 Heat of formation + Delta-G solvation = 11.594244 kcal Electronic energy + Delta-G solvation = -29354.517699 eV Core-core repulsion = 25365.612429 eV Total energy + Delta-G solvation = -3988.905270 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 349.123 amu Computer time = 1.06 seconds Orbital eigenvalues (eV) -41.99338 -40.93529 -39.53511 -38.70475 -37.57384 -37.45007 -34.68955 -33.36866 -32.69094 -31.72038 -31.68715 -27.44178 -26.85917 -26.63747 -25.42683 -23.78036 -23.27485 -22.67342 -21.94054 -20.22388 -19.28583 -19.00248 -18.48684 -17.92487 -17.33134 -17.06380 -16.81320 -16.49195 -16.39862 -15.95024 -15.51921 -15.45409 -15.18291 -14.95750 -14.80048 -14.77771 -14.56280 -14.33065 -14.19563 -13.91235 -13.54003 -13.38191 -13.22130 -13.01563 -12.73989 -12.60040 -12.51955 -12.26984 -12.20671 -11.97110 -11.91139 -11.81130 -11.57555 -11.36984 -11.31957 -10.84403 -10.32862 -9.99858 -9.87545 -9.63593 -8.44982 -5.07705 0.12963 0.23682 1.12984 1.21304 1.32362 1.57733 1.65261 1.97559 2.20323 2.57986 2.66351 3.33065 3.44160 3.52785 3.60887 3.69695 3.79239 3.86230 3.89056 3.92883 4.04393 4.10915 4.19403 4.31052 4.33961 4.35434 4.37527 4.54261 4.55909 4.63619 4.68020 4.69311 4.75831 4.79361 4.84536 4.86643 4.88642 4.95231 5.08783 5.19478 5.25277 5.26396 5.39725 5.43180 5.44343 5.57371 5.82088 6.30954 6.48578 6.91163 6.97234 7.22041 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.556 6.556 2 C -0.064 4.064 3 Si 0.753 3.247 4 C -0.302 4.302 5 C 0.170 3.830 6 N -0.744 5.744 7 C 0.124 3.876 8 C -0.121 4.121 9 C -0.032 4.032 10 C 0.520 3.480 11 O -0.584 6.584 12 N -0.707 5.707 13 C 0.111 3.889 14 H 0.092 0.908 15 C -0.120 4.120 16 C -0.078 4.078 17 H 0.097 0.903 18 C -0.071 4.071 19 C -0.053 4.053 20 Cl -0.077 7.077 21 C -0.120 4.120 22 C -0.115 4.115 23 C -0.114 4.114 24 C -0.111 4.111 25 C -0.141 4.141 26 H 0.399 0.601 27 H 0.099 0.901 28 H -0.297 1.297 29 H -0.303 1.303 30 H 0.152 0.848 31 H 0.414 0.586 32 H 0.076 0.924 33 H 0.098 0.902 34 H 0.077 0.923 35 H 0.052 0.948 36 H 0.110 0.890 37 H 0.420 0.580 38 H 0.110 0.890 39 H 0.080 0.920 40 H 0.140 0.860 41 H 0.152 0.848 42 H 0.151 0.849 43 H 0.147 0.853 44 H 0.057 0.943 45 H 0.107 0.893 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.881 2.108 3.472 4.476 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.365 6.365 2 C -0.176 4.176 3 Si 0.661 3.339 4 C -0.313 4.313 5 C 0.046 3.954 6 N -0.374 5.374 7 C 0.000 4.000 8 C -0.160 4.160 9 C -0.053 4.053 10 C 0.308 3.692 11 O -0.464 6.464 12 N -0.363 5.363 13 C 0.006 3.994 14 H 0.110 0.890 15 C -0.158 4.158 16 C -0.096 4.096 17 H 0.115 0.885 18 C -0.072 4.072 19 C -0.079 4.079 20 Cl -0.048 7.048 21 C -0.139 4.139 22 C -0.133 4.133 23 C -0.132 4.132 24 C -0.129 4.129 25 C -0.179 4.179 26 H 0.250 0.750 27 H 0.116 0.884 28 H -0.225 1.225 29 H -0.232 1.232 30 H 0.169 0.831 31 H 0.251 0.749 32 H 0.095 0.905 33 H 0.117 0.883 34 H 0.096 0.904 35 H 0.071 0.929 36 H 0.128 0.872 37 H 0.262 0.738 38 H 0.129 0.871 39 H 0.098 0.902 40 H 0.158 0.842 41 H 0.170 0.830 42 H 0.169 0.831 43 H 0.165 0.835 44 H 0.076 0.924 45 H 0.126 0.874 Dipole moment (debyes) X Y Z Total from point charges -0.862 1.778 2.585 3.254 hybrid contribution 0.044 0.133 -0.226 0.266 sum -0.818 1.911 2.359 3.144 Atomic orbital electron populations 1.86285 1.17127 1.82048 1.51071 1.25039 0.85579 1.09070 0.97903 0.94598 0.77582 0.76166 0.85538 1.20413 1.17812 0.93491 0.99587 1.20553 0.92055 0.96454 0.86297 1.44697 1.53826 1.14604 1.24292 1.21683 1.01849 0.80995 0.95504 1.21706 0.98857 0.99810 0.95611 1.19678 1.01997 0.92928 0.90736 1.21177 0.80198 0.80704 0.87094 1.90667 1.34288 1.35155 1.86258 1.46342 1.38267 1.43987 1.07689 1.21867 0.97801 0.97378 0.82395 0.89019 1.23336 0.97613 0.96414 0.98464 1.21677 0.97663 0.98935 0.91308 0.88517 1.19683 0.97114 0.94351 0.96048 1.21081 1.00633 0.94881 0.91310 1.98368 1.79118 1.64360 1.62934 1.21311 1.00741 1.01008 0.90836 1.21468 0.96589 0.94396 1.00867 1.21605 0.97969 0.97893 0.95722 1.21249 0.99327 0.99321 0.93037 1.23605 0.95768 0.99280 0.99254 0.75000 0.88440 1.22451 1.23171 0.83133 0.74908 0.90548 0.88326 0.90408 0.92926 0.87227 0.73762 0.87121 0.90151 0.84198 0.83015 0.83095 0.83493 0.92412 0.87428 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 1.67 11.40 -148.98 -1.70 -0.03 16 2 C -0.06 0.02 1.69 71.24 0.12 0.14 16 3 Si 0.75 -0.64 29.72 68.60 2.04 1.40 16 4 C -0.30 0.23 5.03 -16.75 -0.08 0.14 16 5 C 0.17 -0.67 9.61 83.42 0.80 0.13 16 6 N -0.74 4.21 5.83 -345.89 -2.02 2.20 16 7 C 0.12 -0.63 7.16 86.46 0.62 -0.02 16 8 C -0.12 -0.19 4.91 30.79 0.15 -0.04 16 9 C -0.03 -0.07 2.75 -12.43 -0.03 -0.10 16 10 C 0.52 4.35 6.85 87.66 0.60 4.95 16 11 O -0.58 -9.43 15.42 -3.05 -0.05 -9.47 16 12 N -0.71 -3.46 3.57 -440.03 -1.57 -5.03 16 13 C 0.11 0.45 4.29 45.52 0.20 0.65 16 14 H 0.09 0.62 7.50 -2.39 -0.02 0.61 16 15 C -0.12 -0.09 7.29 31.12 0.23 0.14 16 16 C -0.08 -0.22 3.65 -10.95 -0.04 -0.26 16 17 H 0.10 0.49 6.58 -2.39 -0.02 0.47 16 18 C -0.07 -0.24 5.29 -19.84 -0.11 -0.35 16 19 C -0.05 -0.27 6.31 22.32 0.14 -0.13 16 20 Cl -0.08 -0.47 27.16 -2.72 -0.07 -0.54 16 21 C -0.12 -0.32 9.83 22.29 0.22 -0.10 16 22 C -0.12 0.04 10.05 22.27 0.22 0.26 16 23 C -0.11 0.12 10.05 22.27 0.22 0.35 16 24 C -0.11 -0.04 8.62 22.26 0.19 0.15 16 25 C -0.14 -0.45 7.27 31.18 0.23 -0.22 16 26 H 0.40 -4.41 8.70 -74.06 -0.64 -5.06 16 27 H 0.10 0.41 5.29 -2.39 -0.01 0.40 16 28 H -0.30 -1.58 7.11 99.48 0.71 -0.88 16 29 H -0.30 -2.30 7.11 99.48 0.71 -1.60 16 30 H 0.15 -1.25 4.49 -2.91 -0.01 -1.27 16 31 H 0.41 -3.98 8.96 -92.71 -0.83 -4.81 16 32 H 0.08 -0.52 8.14 -2.39 -0.02 -0.54 16 33 H 0.10 -0.78 8.14 -2.39 -0.02 -0.80 16 34 H 0.08 0.14 8.14 -2.38 -0.02 0.12 16 35 H 0.05 0.38 7.76 -2.39 -0.02 0.36 16 36 H 0.11 -0.07 8.14 -2.39 -0.02 -0.09 16 37 H 0.42 1.24 5.23 -92.70 -0.48 0.76 16 38 H 0.11 -0.19 7.72 -2.39 -0.02 -0.21 16 39 H 0.08 0.07 8.14 -2.39 -0.02 0.05 16 40 H 0.14 0.04 8.06 -2.91 -0.02 0.01 16 41 H 0.15 -0.75 8.06 -2.91 -0.02 -0.78 16 42 H 0.15 -0.87 8.06 -2.91 -0.02 -0.89 16 43 H 0.15 -0.48 6.67 -2.91 -0.02 -0.50 16 44 H 0.06 0.35 8.14 -2.39 -0.02 0.33 16 45 H 0.11 0.05 6.33 -2.39 -0.02 0.04 16 Total: 0.00 -19.51 366.21 -0.55 -20.06 By element: Atomic # 1 Polarization: -13.42 SS G_CDS: -0.86 Total: -14.29 kcal Atomic # 6 Polarization: 2.02 SS G_CDS: 3.68 Total: 5.70 kcal Atomic # 7 Polarization: 0.75 SS G_CDS: -3.59 Total: -2.83 kcal Atomic # 8 Polarization: -7.76 SS G_CDS: -1.75 Total: -9.50 kcal Atomic # 14 Polarization: -0.64 SS G_CDS: 2.04 Total: 1.40 kcal Atomic # 17 Polarization: -0.47 SS G_CDS: -0.07 Total: -0.54 kcal Total: -19.51 -0.55 -20.06 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10565092_15608500.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 31.654 kcal (2) G-P(sol) polarization free energy of solvation -19.508 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 12.146 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.552 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.060 kcal (6) G-S(sol) free energy of system = (1) + (5) 11.594 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds