Wall clock time and date at job start Sat Mar 6 2021 13:15:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86306 * 109.47105 * 2 1 4 4 C 1.50697 * 109.46856 * 240.00424 * 2 1 3 5 5 C 1.38709 * 120.02724 * 284.99852 * 4 2 1 6 6 O 1.35900 * 120.05786 * 0.04279 * 5 4 2 7 7 C 1.42894 * 117.00366 * 179.97438 * 6 5 4 8 8 C 1.50699 * 109.47579 * 180.02562 * 7 6 5 9 9 O 1.21283 * 119.99341 * 0.02562 * 8 7 6 10 10 N 1.34776 * 120.00405 * 180.02562 * 8 7 6 11 11 C 1.46499 * 119.99941 * 180.02562 * 10 8 7 12 12 H 1.09000 * 112.85388 * 23.79874 * 11 10 8 13 13 C 1.53777 * 113.61357 * 154.99534 * 11 10 8 14 14 C 1.53786 * 87.08213 * 89.11503 * 13 11 10 15 15 H 1.09004 * 113.61073 * 270.80228 * 14 13 11 16 16 C 1.50699 * 113.61699 * 139.97854 * 14 13 11 17 17 C 1.38337 * 120.00396 * 120.00142 * 16 14 13 18 18 Cl 1.73593 * 120.01238 * 0.02562 * 17 16 14 19 19 C 1.38373 * 119.97008 * 179.97438 * 17 16 14 20 20 C 1.38192 * 119.98726 * 0.02562 * 19 17 16 21 21 C 1.38263 * 120.01577 * 0.02562 * 20 19 17 22 22 C 1.38228 * 120.02343 * 359.70052 * 21 20 19 23 23 C 1.53784 * 87.08076 * 25.42987 * 14 13 11 24 24 C 1.38759 * 119.88974 * 180.02562 * 5 4 2 25 25 C 1.38120 * 119.94381 * 0.02562 * 24 5 4 26 26 C 1.38285 * 120.05710 * 0.02562 * 25 24 5 27 27 C 1.38171 * 120.03194 * 105.04373 * 4 2 1 28 28 H 0.96705 * 114.00100 * 300.00020 * 1 2 3 29 29 H 1.08991 * 109.47103 * 120.00103 * 2 1 3 30 30 H 1.48498 * 110.00036 * 178.68027 * 3 2 1 31 31 H 1.48500 * 110.00004 * 300.00345 * 3 2 1 32 32 H 1.09001 * 109.47530 * 300.00843 * 7 6 5 33 33 H 1.08998 * 109.46987 * 60.00416 * 7 6 5 34 34 H 0.97002 * 119.99581 * 359.97438 * 10 8 7 35 35 H 1.09001 * 113.61295 * 203.65727 * 13 11 10 36 36 H 1.08995 * 113.61934 * 334.48628 * 13 11 10 37 37 H 1.08000 * 120.00327 * 179.97438 * 19 17 16 38 38 H 1.08001 * 119.99336 * 179.97438 * 20 19 17 39 39 H 1.08002 * 119.98634 * 179.97438 * 21 20 19 40 40 H 1.07998 * 119.98829 * 180.30427 * 22 21 20 41 41 H 1.08997 * 113.62035 * 220.01873 * 23 14 13 42 42 H 1.09000 * 113.61248 * 89.11554 * 23 14 13 43 43 H 1.08001 * 120.02997 * 180.02562 * 24 5 4 44 44 H 1.07997 * 119.97310 * 179.97438 * 25 24 5 45 45 H 1.08000 * 119.95126 * 179.70618 * 26 25 24 46 46 H 1.08005 * 119.97031 * 359.97395 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 1.8696 -2.0939 -1.3071 6 8 1.3555 -2.8106 -0.2732 7 6 1.3228 -4.2314 -0.4215 8 6 0.7241 -4.8520 0.8144 9 8 0.3606 -4.1468 1.7317 10 7 0.5925 -6.1906 0.9003 11 6 0.0099 -6.7937 2.1016 12 1 -0.6347 -6.1069 2.6501 13 6 -0.6279 -8.1706 1.8522 14 6 0.7530 -8.7772 2.1525 15 1 1.3891 -8.8720 1.2724 16 6 0.6920 -10.0420 2.9695 17 6 1.2052 -11.2208 2.4589 18 17 1.9201 -11.2434 0.8771 19 6 1.1493 -12.3817 3.2098 20 6 0.5805 -12.3629 4.4691 21 6 0.0669 -11.1847 4.9786 22 6 0.1275 -10.0235 4.2312 23 6 1.0375 -7.5176 2.9876 24 6 2.3333 -2.7451 -2.4412 25 6 2.8556 -2.0145 -3.4906 26 6 2.9169 -0.6352 -3.4115 27 6 2.4545 0.0160 -2.2831 28 1 -0.3933 0.4417 0.7651 29 1 1.7923 -0.5138 0.8899 30 1 3.5346 1.7704 0.0321 31 1 1.5614 2.4680 -1.2084 32 1 0.7165 -4.4924 -1.2889 33 1 2.3370 -4.6055 -0.5614 34 1 0.8829 -6.7545 0.1664 35 1 -1.3904 -8.4375 2.5838 36 1 -0.9572 -8.3195 0.8239 37 1 1.5494 -13.3024 2.8115 38 1 0.5365 -13.2690 5.0552 39 1 -0.3779 -11.1707 5.9627 40 1 -0.2695 -9.1024 4.6316 41 1 2.0537 -7.1397 2.8757 42 1 0.7301 -7.6059 4.0296 43 1 2.2860 -3.8222 -2.5034 44 1 3.2170 -2.5208 -4.3734 45 1 3.3300 -0.0660 -4.2310 46 1 2.5030 1.0933 -2.2238 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10565092_2989392.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:15:27 Heat of formation + Delta-G solvation = -17.026295 kcal Electronic energy + Delta-G solvation = -30251.703584 eV Core-core repulsion = 25907.386291 eV Total energy + Delta-G solvation = -4344.317293 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.112 amu Computer time = 1.30 seconds Orbital eigenvalues (eV) -41.85257 -41.38851 -40.38489 -39.05611 -38.33557 -37.49903 -37.42192 -34.76387 -32.98290 -32.01393 -31.67600 -31.30308 -29.41727 -26.75383 -26.69963 -26.17933 -24.03238 -23.58658 -22.65394 -22.55086 -21.85656 -20.23109 -19.40794 -18.59407 -18.42869 -18.08497 -17.45651 -17.40793 -16.96418 -16.88298 -16.53307 -16.37620 -15.78041 -15.71275 -15.50813 -15.15349 -15.05853 -14.92789 -14.78794 -14.74360 -14.41046 -14.10090 -13.85671 -13.68930 -13.50231 -13.37497 -13.05892 -12.97571 -12.75340 -12.70259 -12.49010 -12.22630 -12.16846 -12.02880 -11.83306 -11.78819 -11.53720 -11.28725 -11.05533 -10.26982 -10.21521 -10.12023 -9.84457 -9.59198 -9.34440 -4.97579 0.07405 0.17248 0.26935 0.27927 1.15717 1.27118 1.37657 1.39571 1.60589 1.89506 2.49812 2.54611 2.62109 3.38717 3.41269 3.48576 3.58420 3.64184 3.67064 3.83408 3.85298 3.92778 3.93026 4.01848 4.05498 4.09705 4.15055 4.15934 4.21544 4.38230 4.39189 4.39263 4.52678 4.60340 4.70857 4.74336 4.80081 4.84251 4.88122 4.96382 5.00010 5.09163 5.14549 5.22135 5.28993 5.35936 5.38317 5.48627 5.55158 5.60538 5.85869 6.17314 6.39193 6.86521 7.06104 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.563 6.563 2 C -0.078 4.078 3 Si 0.781 3.219 4 C -0.136 4.136 5 C 0.133 3.867 6 O -0.306 6.306 7 C 0.034 3.966 8 C 0.519 3.481 9 O -0.563 6.563 10 N -0.694 5.694 11 C 0.118 3.882 12 H 0.090 0.910 13 C -0.121 4.121 14 C -0.076 4.076 15 H 0.106 0.894 16 C -0.070 4.070 17 C -0.050 4.050 18 Cl -0.075 7.075 19 C -0.122 4.122 20 C -0.117 4.117 21 C -0.116 4.116 22 C -0.112 4.112 23 C -0.139 4.139 24 C -0.208 4.208 25 C -0.073 4.073 26 C -0.158 4.158 27 C -0.105 4.105 28 H 0.397 0.603 29 H 0.065 0.935 30 H -0.286 1.286 31 H -0.281 1.281 32 H 0.121 0.879 33 H 0.124 0.876 34 H 0.419 0.581 35 H 0.106 0.894 36 H 0.087 0.913 37 H 0.139 0.861 38 H 0.149 0.851 39 H 0.148 0.852 40 H 0.147 0.853 41 H 0.068 0.932 42 H 0.103 0.897 43 H 0.163 0.837 44 H 0.161 0.839 45 H 0.148 0.852 46 H 0.125 0.875 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.360 -4.160 0.298 4.186 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.372 6.372 2 C -0.187 4.187 3 Si 0.685 3.315 4 C -0.137 4.137 5 C 0.087 3.913 6 O -0.218 6.218 7 C -0.044 4.044 8 C 0.305 3.695 9 O -0.441 6.441 10 N -0.348 5.348 11 C 0.013 3.987 12 H 0.108 0.892 13 C -0.159 4.159 14 C -0.094 4.094 15 H 0.124 0.876 16 C -0.071 4.071 17 C -0.076 4.076 18 Cl -0.046 7.046 19 C -0.140 4.140 20 C -0.136 4.136 21 C -0.134 4.134 22 C -0.130 4.130 23 C -0.177 4.177 24 C -0.226 4.226 25 C -0.091 4.091 26 C -0.176 4.176 27 C -0.122 4.122 28 H 0.247 0.753 29 H 0.083 0.917 30 H -0.213 1.213 31 H -0.209 1.209 32 H 0.138 0.862 33 H 0.141 0.859 34 H 0.256 0.744 35 H 0.124 0.876 36 H 0.105 0.895 37 H 0.156 0.844 38 H 0.166 0.834 39 H 0.166 0.834 40 H 0.165 0.835 41 H 0.086 0.914 42 H 0.121 0.879 43 H 0.180 0.820 44 H 0.178 0.822 45 H 0.166 0.834 46 H 0.143 0.857 Dipole moment (debyes) X Y Z Total from point charges 0.642 -3.326 0.036 3.387 hybrid contribution 0.392 -1.047 -0.723 1.331 sum 1.034 -4.372 -0.688 4.545 Atomic orbital electron populations 1.86443 1.17614 1.82565 1.50577 1.24846 0.85721 1.11524 0.96618 0.94167 0.77436 0.75136 0.84760 1.19051 1.05645 0.91424 0.97554 1.18981 0.93840 0.90775 0.87655 1.86158 1.77776 1.18738 1.39174 1.22740 1.04562 0.79745 0.97380 1.20389 0.78225 0.82839 0.88080 1.90758 1.49818 1.62344 1.41143 1.45364 1.63380 1.05487 1.20555 1.21845 0.95833 0.94493 0.86544 0.89156 1.23368 0.96058 0.92361 1.04140 1.21695 0.98967 0.90216 0.98496 0.87585 1.19704 0.98304 0.93572 0.95522 1.21035 1.02530 0.95900 0.88171 1.98359 1.82375 1.98589 1.25242 1.21300 1.00297 0.97376 0.95062 1.21444 0.97535 0.99666 0.94907 1.21600 0.98479 0.92357 1.00974 1.21262 0.99004 0.99689 0.93029 1.23560 0.99973 0.94458 0.99743 1.21677 1.05046 1.02126 0.93795 1.21416 0.95457 0.93623 0.98571 1.21371 1.02294 0.95644 0.98264 1.21021 0.98402 0.99329 0.93463 0.75312 0.91671 1.21302 1.20885 0.86159 0.85881 0.74386 0.87562 0.89465 0.84359 0.83376 0.83413 0.83493 0.91356 0.87861 0.81959 0.82150 0.83407 0.85742 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -4.82 12.86 -148.98 -1.92 -6.73 16 2 C -0.08 -0.60 2.37 71.23 0.17 -0.43 16 3 Si 0.78 1.88 30.20 68.60 2.07 3.95 16 4 C -0.14 -1.36 5.30 -19.77 -0.10 -1.46 16 5 C 0.13 1.07 6.66 22.51 0.15 1.22 16 6 O -0.31 -2.79 9.00 -73.39 -0.66 -3.46 16 7 C 0.03 -0.02 5.22 71.24 0.37 0.35 16 8 C 0.52 2.01 7.91 87.66 0.69 2.71 16 9 O -0.56 -8.27 16.10 16.00 0.26 -8.01 16 10 N -0.69 2.15 5.26 -440.04 -2.32 -0.17 16 11 C 0.12 -0.24 4.32 45.52 0.20 -0.04 16 12 H 0.09 0.21 7.46 -2.39 -0.02 0.20 16 13 C -0.12 0.63 7.29 31.12 0.23 0.86 16 14 C -0.08 0.28 3.64 -11.01 -0.04 0.24 16 15 H 0.11 -0.41 6.57 -2.38 -0.02 -0.43 16 16 C -0.07 0.07 5.29 -19.84 -0.10 -0.03 16 17 C -0.05 -0.05 6.31 22.33 0.14 0.09 16 18 Cl -0.07 -0.06 27.16 -2.72 -0.07 -0.14 16 19 C -0.12 0.02 9.83 22.29 0.22 0.24 16 20 C -0.12 0.28 10.05 22.26 0.22 0.51 16 21 C -0.12 0.38 10.05 22.27 0.22 0.60 16 22 C -0.11 0.31 8.62 22.27 0.19 0.51 16 23 C -0.14 0.39 7.25 31.12 0.23 0.61 16 24 C -0.21 -0.30 9.04 22.37 0.20 -0.10 16 25 C -0.07 -0.03 10.04 22.25 0.22 0.20 16 26 C -0.16 -0.51 10.04 22.28 0.22 -0.29 16 27 C -0.10 -0.81 8.66 22.26 0.19 -0.61 16 28 H 0.40 -0.58 8.74 -74.05 -0.65 -1.23 16 29 H 0.07 0.54 7.83 -2.39 -0.02 0.52 16 30 H -0.29 -2.06 7.11 99.48 0.71 -1.35 16 31 H -0.28 -2.04 6.75 99.48 0.67 -1.36 16 32 H 0.12 -0.74 7.66 -2.39 -0.02 -0.76 16 33 H 0.12 -0.86 7.66 -2.39 -0.02 -0.88 16 34 H 0.42 -4.00 8.70 -92.71 -0.81 -4.81 16 35 H 0.11 -0.63 7.73 -2.39 -0.02 -0.65 16 36 H 0.09 -0.56 8.14 -2.39 -0.02 -0.58 16 37 H 0.14 -0.31 8.06 -2.91 -0.02 -0.33 16 38 H 0.15 -0.95 8.06 -2.91 -0.02 -0.97 16 39 H 0.15 -1.09 8.06 -2.91 -0.02 -1.11 16 40 H 0.15 -0.93 6.64 -2.91 -0.02 -0.95 16 41 H 0.07 -0.05 8.14 -2.39 -0.02 -0.07 16 42 H 0.10 -0.41 6.30 -2.39 -0.02 -0.43 16 43 H 0.16 -0.97 6.30 -2.91 -0.02 -0.99 16 44 H 0.16 -0.98 8.06 -2.91 -0.02 -1.00 16 45 H 0.15 -0.22 8.06 -2.91 -0.02 -0.24 16 46 H 0.13 0.85 4.90 -2.91 -0.01 0.84 16 Total: 0.00 -26.55 395.40 0.58 -25.97 By element: Atomic # 1 Polarization: -16.19 SS G_CDS: -0.41 Total: -16.60 kcal Atomic # 6 Polarization: 1.55 SS G_CDS: 3.62 Total: 5.18 kcal Atomic # 7 Polarization: 2.15 SS G_CDS: -2.32 Total: -0.17 kcal Atomic # 8 Polarization: -15.88 SS G_CDS: -2.32 Total: -18.20 kcal Atomic # 14 Polarization: 1.88 SS G_CDS: 2.07 Total: 3.95 kcal Atomic # 17 Polarization: -0.06 SS G_CDS: -0.07 Total: -0.14 kcal Total: -26.55 0.58 -25.97 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10565092_2989392.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 8.940 kcal (2) G-P(sol) polarization free energy of solvation -26.548 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -17.609 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.582 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.966 kcal (6) G-S(sol) free energy of system = (1) + (5) -17.026 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.31 seconds