Wall clock time and date at job start Sat Mar 6 2021 13:15:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86300 * 109.47618 * 2 1 4 4 C 1.50704 * 109.47078 * 239.99771 * 2 1 3 5 5 C 1.38265 * 119.94345 * 299.99999 * 4 2 1 6 6 C 1.38141 * 120.05364 * 179.97438 * 5 4 2 7 7 C 1.38738 * 119.94703 * 0.02562 * 6 5 4 8 8 O 1.35897 * 120.05732 * 179.97438 * 7 6 5 9 9 C 1.42905 * 117.00144 * 180.02562 * 8 7 6 10 10 C 1.52997 * 109.47233 * 180.02562 * 9 8 7 11 11 C 1.50703 * 109.46815 * 179.97438 * 10 9 8 12 12 O 1.21277 * 119.99948 * 0.02562 * 11 10 9 13 13 N 1.34779 * 119.99369 * 180.02562 * 11 10 9 14 14 C 1.46496 * 119.99390 * 180.02562 * 13 11 10 15 15 H 1.09000 * 112.91246 * 23.74616 * 14 13 11 16 16 C 1.53786 * 113.61518 * 154.99856 * 14 13 11 17 17 C 1.53781 * 87.17350 * 89.15486 * 16 14 13 18 18 H 1.08996 * 113.61580 * 270.76247 * 17 16 14 19 19 C 1.50703 * 113.61417 * 139.93966 * 17 16 14 20 20 C 1.38326 * 120.00327 * 120.00037 * 19 17 16 21 21 Cl 1.73600 * 120.01598 * 359.95570 * 20 19 17 22 22 C 1.38373 * 119.97110 * 179.97438 * 20 19 17 23 23 C 1.38194 * 119.99042 * 0.02562 * 22 20 19 24 24 C 1.38263 * 120.00788 * 359.97438 * 23 22 20 25 25 C 1.38220 * 120.02936 * 359.74887 * 24 23 22 26 26 C 1.53782 * 87.08260 * 25.39213 * 17 16 14 27 27 C 1.38731 * 119.88520 * 0.27074 * 7 6 5 28 28 C 1.38147 * 119.94571 * 359.47836 * 27 7 6 29 29 H 0.96699 * 113.99805 * 60.00207 * 1 2 3 30 30 H 1.09002 * 109.47332 * 120.00218 * 2 1 3 31 31 H 1.48496 * 109.99717 * 59.99699 * 3 2 1 32 32 H 1.48493 * 110.00163 * 181.31639 * 3 2 1 33 33 H 1.08003 * 119.97206 * 359.97438 * 5 4 2 34 34 H 1.08001 * 120.02799 * 180.02562 * 6 5 4 35 35 H 1.08994 * 109.46823 * 59.99768 * 9 8 7 36 36 H 1.09005 * 109.46511 * 300.00390 * 9 8 7 37 37 H 1.09002 * 109.47170 * 59.99934 * 10 9 8 38 38 H 1.09002 * 109.46995 * 300.00012 * 10 9 8 39 39 H 0.97001 * 120.00492 * 359.97438 * 13 11 10 40 40 H 1.09002 * 113.61357 * 334.56403 * 16 14 13 41 41 H 1.09002 * 113.61608 * 203.74565 * 16 14 13 42 42 H 1.08008 * 120.00928 * 179.97438 * 22 20 19 43 43 H 1.07993 * 119.99798 * 179.97438 * 23 22 20 44 44 H 1.08007 * 119.98794 * 180.02562 * 24 23 22 45 45 H 1.08003 * 119.99603 * 180.27278 * 25 24 23 46 46 H 1.08997 * 113.61668 * 89.11298 * 26 17 16 47 47 H 1.08994 * 113.61387 * 220.02033 * 26 17 16 48 48 H 1.07995 * 120.02849 * 179.71512 * 27 7 6 49 49 H 1.08000 * 119.97538 * 180.22758 * 28 27 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0502 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2305 5 6 1.5966 -2.0342 -1.4481 6 6 2.0554 -2.6875 -2.5755 7 6 2.8531 -2.0145 -3.4895 8 8 3.3060 -2.6551 -4.5991 9 6 4.1230 -1.9001 -5.4961 10 6 4.5335 -2.7820 -6.6770 11 6 5.3945 -1.9856 -7.6233 12 8 5.6546 -0.8269 -7.3771 13 7 5.8754 -2.5611 -8.7431 14 6 6.7129 -1.7870 -9.6627 15 1 7.2101 -0.9465 -9.1785 16 6 7.6560 -2.6531 -10.5144 17 6 6.5184 -2.7437 -11.5451 18 1 5.8429 -3.5824 -11.3773 19 6 6.9890 -2.6480 -12.9736 20 6 6.7511 -3.6901 -13.8515 21 17 5.9113 -5.1089 -13.3081 22 6 7.1831 -3.6013 -15.1631 23 6 7.8523 -2.4720 -15.5950 24 6 8.0898 -1.4307 -14.7169 25 6 7.6535 -1.5164 -13.4082 26 6 6.0025 -1.4115 -10.9760 27 6 3.1926 -0.6881 -3.2657 28 6 2.7270 -0.0377 -2.1394 29 1 -0.3933 0.4417 -0.7651 30 1 1.7924 -0.5139 0.8900 31 1 1.5616 2.4678 1.2084 32 1 3.5347 1.7701 -0.0321 33 1 0.9759 -2.5579 -0.7360 34 1 1.7933 -3.7214 -2.7452 35 1 5.0146 -1.5552 -4.9726 36 1 3.5616 -1.0407 -5.8627 37 1 3.6416 -3.1266 -7.2005 38 1 5.0947 -3.6417 -6.3107 39 1 5.6677 -3.4879 -8.9398 40 1 7.9054 -3.6092 -10.0542 41 1 8.5326 -2.1167 -10.8776 42 1 6.9980 -4.4148 -15.8491 43 1 8.1898 -2.4027 -16.6185 44 1 8.6125 -0.5481 -15.0549 45 1 7.8355 -0.7009 -12.7239 46 1 6.4265 -0.5344 -11.4648 47 1 4.9170 -1.3652 -10.8885 48 1 3.8172 -0.1633 -3.9734 49 1 2.9880 0.9960 -1.9666 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10565092_4549602.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:15:35 Heat of formation + Delta-G solvation = -29.385180 kcal Electronic energy + Delta-G solvation = -31160.011808 eV Core-core repulsion = 26659.620975 eV Total energy + Delta-G solvation = -4500.390833 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 388.127 amu Computer time = 1.52 seconds Orbital eigenvalues (eV) -41.69890 -41.27687 -40.45596 -39.24407 -38.79228 -37.41585 -37.16887 -34.68676 -33.34397 -32.11086 -31.74248 -31.67059 -31.26807 -26.95508 -26.72729 -26.21156 -25.36611 -23.84073 -23.47576 -22.59114 -22.22141 -21.55236 -20.15348 -19.55248 -18.48530 -18.24722 -17.68456 -17.48164 -17.19032 -16.94984 -16.61621 -16.43677 -16.34180 -16.06627 -15.90299 -15.63442 -15.19782 -15.09459 -14.81120 -14.73902 -14.71655 -14.47551 -14.31447 -14.26827 -14.08722 -13.54972 -13.48923 -13.36635 -12.98713 -12.87408 -12.80390 -12.68345 -12.47954 -12.20314 -12.15505 -12.04525 -11.79393 -11.75575 -11.69416 -11.53179 -11.26605 -11.07048 -10.42337 -10.13912 -10.05056 -9.83753 -9.58534 -9.21336 -5.01379 0.17816 0.27597 0.28420 0.30028 1.16507 1.32079 1.49514 1.61486 1.68412 1.94392 2.46389 2.62716 2.65671 3.41561 3.53201 3.56266 3.59560 3.65102 3.71511 3.82815 3.85390 3.89019 3.90476 3.95653 4.01976 4.10625 4.17107 4.25523 4.33870 4.38906 4.39916 4.43883 4.50466 4.62219 4.66218 4.68230 4.71870 4.75472 4.77500 4.84265 4.90964 4.96927 4.97970 5.01266 5.13110 5.17513 5.28108 5.29673 5.41719 5.48945 5.49134 5.59484 5.71585 5.86382 6.31607 6.43851 6.78229 7.13328 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.556 6.556 2 C -0.066 4.066 3 Si 0.769 3.231 4 C -0.162 4.162 5 C -0.060 4.060 6 C -0.159 4.159 7 C 0.123 3.877 8 O -0.322 6.322 9 C 0.073 3.927 10 C -0.134 4.134 11 C 0.524 3.476 12 O -0.579 6.579 13 N -0.700 5.700 14 C 0.118 3.882 15 H 0.093 0.907 16 C -0.123 4.123 17 C -0.077 4.077 18 H 0.104 0.896 19 C -0.070 4.070 20 C -0.050 4.050 21 Cl -0.075 7.075 22 C -0.122 4.122 23 C -0.118 4.118 24 C -0.116 4.116 25 C -0.112 4.112 26 C -0.138 4.138 27 C -0.209 4.209 28 C -0.080 4.080 29 H 0.395 0.605 30 H 0.107 0.893 31 H -0.298 1.298 32 H -0.289 1.289 33 H 0.139 0.861 34 H 0.141 0.859 35 H 0.065 0.935 36 H 0.068 0.932 37 H 0.126 0.874 38 H 0.126 0.874 39 H 0.417 0.583 40 H 0.084 0.916 41 H 0.105 0.895 42 H 0.138 0.862 43 H 0.148 0.852 44 H 0.148 0.852 45 H 0.148 0.852 46 H 0.102 0.898 47 H 0.068 0.932 48 H 0.141 0.859 49 H 0.144 0.856 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.471 -0.354 -5.667 5.866 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.364 6.364 2 C -0.176 4.176 3 Si 0.676 3.324 4 C -0.162 4.162 5 C -0.078 4.078 6 C -0.177 4.177 7 C 0.078 3.922 8 O -0.236 6.236 9 C -0.003 4.003 10 C -0.173 4.173 11 C 0.311 3.689 12 O -0.459 6.459 13 N -0.352 5.352 14 C 0.012 3.988 15 H 0.111 0.889 16 C -0.161 4.161 17 C -0.096 4.096 18 H 0.123 0.877 19 C -0.071 4.071 20 C -0.077 4.077 21 Cl -0.046 7.046 22 C -0.141 4.141 23 C -0.136 4.136 24 C -0.134 4.134 25 C -0.130 4.130 26 C -0.177 4.177 27 C -0.228 4.228 28 C -0.098 4.098 29 H 0.245 0.755 30 H 0.124 0.876 31 H -0.226 1.226 32 H -0.216 1.216 33 H 0.157 0.843 34 H 0.159 0.841 35 H 0.084 0.916 36 H 0.087 0.913 37 H 0.144 0.856 38 H 0.144 0.856 39 H 0.254 0.746 40 H 0.103 0.897 41 H 0.123 0.877 42 H 0.156 0.844 43 H 0.166 0.834 44 H 0.166 0.834 45 H 0.166 0.834 46 H 0.120 0.880 47 H 0.087 0.913 48 H 0.158 0.842 49 H 0.161 0.839 Dipole moment (debyes) X Y Z Total from point charges 2.116 0.404 -4.558 5.041 hybrid contribution 0.044 -1.087 -0.024 1.088 sum 2.160 -0.683 -4.582 5.111 Atomic orbital electron populations 1.86455 1.17274 1.82146 1.50499 1.25044 0.85213 1.10350 0.97017 0.93763 0.77811 0.75942 0.84857 1.20328 1.01977 0.95687 0.98223 1.20962 0.97089 0.93687 0.96029 1.20668 1.00978 1.01550 0.94522 1.19180 0.94508 0.91462 0.87098 1.85958 1.65234 1.40783 1.31581 1.22459 0.94134 0.94197 0.89472 1.21443 1.01946 0.99581 0.94353 1.20606 0.79559 0.86952 0.81742 1.90736 1.60344 1.19110 1.75700 1.45568 1.51525 1.16262 1.21851 1.21857 0.92292 0.95459 0.89184 0.88938 1.23363 0.96848 1.01139 0.94772 1.21695 0.98763 0.99618 0.89474 0.87744 1.19717 0.98728 0.93153 0.95479 1.21041 1.01530 0.89905 0.95199 1.98361 1.76823 1.39252 1.90182 1.21302 0.98821 0.99842 0.94103 1.21441 0.98057 0.92826 1.01253 1.21599 0.98857 0.99542 0.93426 1.21260 0.97607 0.97325 0.96768 1.23579 1.01129 0.97358 0.95625 1.21421 1.05812 0.94450 1.01068 1.20999 0.95923 0.99815 0.93026 0.75535 0.87573 1.22586 1.21571 0.84301 0.84103 0.91649 0.91333 0.85554 0.85603 0.74612 0.89729 0.87712 0.84394 0.83394 0.83399 0.83441 0.87958 0.91334 0.84155 0.83900 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.63 12.77 -148.98 -1.90 -2.54 16 2 C -0.07 -0.05 2.82 71.24 0.20 0.15 16 3 Si 0.77 -0.51 29.78 68.60 2.04 1.53 16 4 C -0.16 -0.29 5.39 -19.85 -0.11 -0.40 16 5 C -0.06 -0.15 9.60 22.25 0.21 0.07 16 6 C -0.16 -0.50 9.99 22.37 0.22 -0.28 16 7 C 0.12 0.51 6.69 22.51 0.15 0.66 16 8 O -0.32 -1.00 10.14 -92.39 -0.94 -1.94 16 9 C 0.07 0.02 4.03 71.98 0.29 0.31 16 10 C -0.13 0.63 6.07 29.85 0.18 0.81 16 11 C 0.52 -0.08 7.83 87.66 0.69 0.60 16 12 O -0.58 -4.89 15.58 -3.02 -0.05 -4.94 16 13 N -0.70 3.17 5.27 -439.74 -2.32 0.86 16 14 C 0.12 -0.38 4.33 45.58 0.20 -0.19 16 15 H 0.09 0.04 7.47 -2.39 -0.02 0.02 16 16 C -0.12 0.69 7.29 31.12 0.23 0.92 16 17 C -0.08 0.30 3.65 -11.01 -0.04 0.26 16 18 H 0.10 -0.38 6.57 -2.39 -0.02 -0.40 16 19 C -0.07 0.08 5.29 -19.84 -0.10 -0.02 16 20 C -0.05 -0.05 6.31 22.32 0.14 0.09 16 21 Cl -0.08 -0.08 27.16 -2.72 -0.07 -0.16 16 22 C -0.12 0.02 9.83 22.29 0.22 0.24 16 23 C -0.12 0.30 10.05 22.27 0.22 0.52 16 24 C -0.12 0.41 10.05 22.27 0.22 0.63 16 25 C -0.11 0.35 8.62 22.26 0.19 0.54 16 26 C -0.14 0.50 7.26 31.18 0.23 0.73 16 27 C -0.21 -0.57 9.04 22.37 0.20 -0.37 16 28 C -0.08 -0.10 8.66 22.26 0.19 0.09 16 29 H 0.39 -2.64 8.70 -74.06 -0.64 -3.29 16 30 H 0.11 0.19 7.96 -2.39 -0.02 0.17 16 31 H -0.30 -1.95 7.11 99.48 0.71 -1.24 16 32 H -0.29 -1.24 7.11 99.48 0.71 -0.53 16 33 H 0.14 0.10 8.06 -2.91 -0.02 0.07 16 34 H 0.14 0.10 8.06 -2.91 -0.02 0.08 16 35 H 0.07 0.11 7.61 -2.39 -0.02 0.09 16 36 H 0.07 0.08 7.63 -2.38 -0.02 0.06 16 37 H 0.13 -1.03 8.14 -2.39 -0.02 -1.05 16 38 H 0.13 -1.02 8.14 -2.39 -0.02 -1.04 16 39 H 0.42 -4.00 8.70 -92.71 -0.81 -4.81 16 40 H 0.08 -0.54 8.14 -2.39 -0.02 -0.56 16 41 H 0.10 -0.66 7.73 -2.39 -0.02 -0.68 16 42 H 0.14 -0.30 8.06 -2.91 -0.02 -0.32 16 43 H 0.15 -0.96 8.06 -2.91 -0.02 -0.98 16 44 H 0.15 -1.13 8.06 -2.91 -0.02 -1.15 16 45 H 0.15 -1.00 6.64 -2.91 -0.02 -1.02 16 46 H 0.10 -0.50 6.30 -2.39 -0.02 -0.51 16 47 H 0.07 -0.12 8.14 -2.39 -0.02 -0.14 16 48 H 0.14 0.12 6.30 -2.91 -0.02 0.10 16 49 H 0.14 -0.37 4.87 -2.91 -0.01 -0.39 16 Total: 0.00 -19.43 417.05 0.10 -19.33 By element: Atomic # 1 Polarization: -17.12 SS G_CDS: -0.41 Total: -17.52 kcal Atomic # 6 Polarization: 1.64 SS G_CDS: 3.74 Total: 5.38 kcal Atomic # 7 Polarization: 3.17 SS G_CDS: -2.32 Total: 0.86 kcal Atomic # 8 Polarization: -6.53 SS G_CDS: -2.89 Total: -9.42 kcal Atomic # 14 Polarization: -0.51 SS G_CDS: 2.04 Total: 1.53 kcal Atomic # 17 Polarization: -0.08 SS G_CDS: -0.07 Total: -0.16 kcal Total: -19.43 0.10 -19.33 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10565092_4549602.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -10.054 kcal (2) G-P(sol) polarization free energy of solvation -19.432 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -29.486 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.101 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.332 kcal (6) G-S(sol) free energy of system = (1) + (5) -29.385 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.52 seconds