Wall clock time and date at job start Sat Mar 6 2021 13:15:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86296 * 109.47222 * 2 1 4 4 C 1.50705 * 109.47326 * 119.99636 * 2 1 3 5 5 C 1.38242 * 119.97695 * 245.00013 * 4 2 1 6 6 C 1.38279 * 120.11340 * 179.97438 * 5 4 2 7 7 C 1.38124 * 120.05745 * 0.05475 * 6 5 4 8 8 C 1.38755 * 119.94455 * 359.96362 * 7 6 5 9 9 O 1.35893 * 120.05676 * 180.02562 * 8 7 6 10 10 C 1.42897 * 117.00297 * 0.02562 * 9 8 7 11 11 C 1.53003 * 109.47642 * 179.97438 * 10 9 8 12 12 C 1.52997 * 109.47306 * 179.97438 * 11 10 9 13 13 C 1.50703 * 109.46815 * 179.97438 * 12 11 10 14 14 O 1.21277 * 119.99948 * 0.02562 * 13 12 11 15 15 N 1.34779 * 119.99369 * 180.02562 * 13 12 11 16 16 C 1.46496 * 119.99390 * 180.02562 * 15 13 12 17 17 H 1.09000 * 112.91246 * 23.74616 * 16 15 13 18 18 C 1.53786 * 113.61518 * 154.99856 * 16 15 13 19 19 C 1.53781 * 87.17350 * 89.15486 * 18 16 15 20 20 H 1.08997 * 113.61223 * 270.84552 * 19 18 16 21 21 C 1.50698 * 113.61342 * 140.02323 * 19 18 16 22 22 C 1.38337 * 120.00450 * 119.72803 * 21 19 18 23 23 Cl 1.73600 * 120.01341 * 359.97391 * 22 21 19 24 24 C 1.38375 * 119.97034 * 179.70134 * 22 21 19 25 25 C 1.38191 * 119.98825 * 0.59014 * 24 22 21 26 26 C 1.38268 * 120.01416 * 359.70870 * 25 24 22 27 27 C 1.38228 * 120.02354 * 359.97384 * 26 25 24 28 28 C 1.53782 * 87.08260 * 25.39213 * 19 18 16 29 29 C 1.38165 * 119.96661 * 65.30036 * 4 2 1 30 30 H 0.96699 * 114.00187 * 299.99916 * 1 2 3 31 31 H 1.08998 * 109.47409 * 239.99960 * 2 1 3 32 32 H 1.48499 * 110.00413 * 178.68264 * 3 2 1 33 33 H 1.48505 * 109.99906 * 299.99935 * 3 2 1 34 34 H 1.08004 * 119.93871 * 359.97438 * 5 4 2 35 35 H 1.08000 * 119.97146 * 180.02562 * 6 5 4 36 36 H 1.07996 * 120.03011 * 179.97438 * 7 6 5 37 37 H 1.09002 * 109.47207 * 59.99400 * 10 9 8 38 38 H 1.09002 * 109.47135 * 299.99809 * 10 9 8 39 39 H 1.08994 * 109.46917 * 59.99323 * 11 10 9 40 40 H 1.09005 * 109.46344 * 299.99990 * 11 10 9 41 41 H 1.09002 * 109.47170 * 59.99774 * 12 11 10 42 42 H 1.09002 * 109.46995 * 299.99853 * 12 11 10 43 43 H 0.97001 * 120.00492 * 359.97438 * 15 13 12 44 44 H 1.09002 * 113.61357 * 334.56403 * 18 16 15 45 45 H 1.09002 * 113.61608 * 203.74565 * 18 16 15 46 46 H 1.07999 * 120.00563 * 180.27591 * 24 22 21 47 47 H 1.07994 * 119.99795 * 179.72566 * 25 24 22 48 48 H 1.07999 * 119.98699 * 179.97438 * 26 25 24 49 49 H 1.07998 * 119.99159 * 180.02562 * 27 26 25 50 50 H 1.08997 * 113.61668 * 89.11298 * 28 19 18 51 51 H 1.08998 * 113.61674 * 219.93807 * 28 19 18 52 52 H 1.08001 * 120.03256 * 359.97438 * 29 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7103 1.2305 5 6 2.6388 -0.0116 2.1910 6 6 3.1006 -0.6605 3.3214 7 6 2.8570 -2.0092 3.4931 8 6 2.1476 -2.7129 2.5304 9 8 1.9062 -4.0398 2.6972 10 6 2.4117 -4.6465 3.8881 11 6 2.0440 -6.1317 3.8997 12 6 2.5858 -6.7813 5.1745 13 6 2.2230 -8.2440 5.1861 14 8 1.5936 -8.7199 4.2651 15 7 2.5981 -9.0231 6.2199 16 6 2.2460 -10.4450 6.2309 17 1 2.0666 -10.8455 5.2331 18 6 3.1944 -11.3080 7.0798 19 6 2.2688 -11.0169 8.2727 20 1 2.5371 -10.1155 8.8237 21 6 2.0479 -12.2073 9.1700 22 6 2.4180 -12.1481 10.5016 23 17 3.1377 -10.7028 11.1394 24 6 2.2092 -13.2394 11.3263 25 6 1.6423 -14.3920 10.8165 26 6 1.2782 -14.4528 9.4840 27 6 1.4805 -13.3606 8.6612 28 6 1.1444 -10.7997 7.2464 29 6 1.6899 -2.0608 1.3948 30 1 -0.3933 0.4417 0.7650 31 1 1.7924 -0.5138 -0.8899 32 1 3.5346 1.7703 0.0321 33 1 1.5615 2.4678 -1.2085 34 1 2.8310 1.0428 2.0582 35 1 3.6527 -0.1123 4.0705 36 1 3.2183 -2.5156 4.3759 37 1 1.9746 -4.1575 4.7587 38 1 3.4961 -4.5401 3.9180 39 1 2.4807 -6.6208 3.0291 40 1 0.9595 -6.2376 3.8700 41 1 2.1493 -6.2921 6.0453 42 1 3.6702 -6.6753 5.2036 43 1 3.1019 -8.6424 6.9563 44 1 4.1924 -10.8832 7.1876 45 1 3.2107 -12.3575 6.7857 46 1 2.4939 -13.1922 12.3670 47 1 1.4833 -15.2453 11.4590 48 1 0.8355 -15.3539 9.0860 49 1 1.1955 -13.4085 7.6206 50 1 0.5991 -11.7099 6.9969 51 1 0.4865 -9.9653 7.4894 52 1 1.1410 -2.6072 0.6421 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10565092_4549616.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:15:43 Heat of formation + Delta-G solvation = -37.022036 kcal Electronic energy + Delta-G solvation = -32762.866599 eV Core-core repulsion = 28106.606988 eV Total energy + Delta-G solvation = -4656.259611 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 402.143 amu Computer time = 1.42 seconds Orbital eigenvalues (eV) -41.65130 -41.26427 -40.46416 -39.22935 -38.85614 -37.42000 -37.29427 -34.91642 -34.56879 -32.45710 -31.86035 -31.67976 -31.17151 -28.45840 -26.87268 -26.74061 -26.09863 -23.99414 -23.68995 -23.44262 -22.55412 -21.89573 -21.46830 -20.15030 -19.19794 -18.53595 -17.97906 -17.81205 -17.47166 -17.19281 -17.04242 -16.83275 -16.59001 -16.45591 -16.30366 -16.11547 -15.42538 -15.27303 -15.20533 -14.90628 -14.81415 -14.73646 -14.58215 -14.45325 -14.19497 -14.16582 -13.57799 -13.42248 -13.32820 -13.22482 -13.05612 -12.92726 -12.72549 -12.68182 -12.48567 -12.32906 -12.24781 -12.16265 -12.01801 -11.76936 -11.61782 -11.59579 -11.53500 -11.27321 -10.98451 -10.48769 -10.11277 -9.93248 -9.84537 -9.59288 -9.24279 -4.99129 0.16887 0.21700 0.27478 0.40991 1.15686 1.29523 1.57895 1.65604 1.89195 1.98664 2.36357 2.61713 2.68539 3.40988 3.50247 3.57895 3.60445 3.66951 3.68640 3.84421 3.85416 3.87936 3.94472 3.97575 4.09424 4.11238 4.16014 4.19541 4.25413 4.34423 4.37977 4.38964 4.40336 4.40939 4.51958 4.60152 4.64901 4.68920 4.70757 4.74012 4.84532 4.90355 4.96389 4.98557 4.99770 5.00474 5.12362 5.16862 5.28661 5.29035 5.38966 5.42320 5.45539 5.48354 5.60692 5.75257 5.85331 6.42849 6.50643 6.74640 7.22486 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.557 6.557 2 C -0.084 4.084 3 Si 0.792 3.208 4 C -0.085 4.085 5 C -0.158 4.158 6 C -0.072 4.072 7 C -0.206 4.206 8 C 0.116 3.884 9 O -0.339 6.339 10 C 0.058 3.942 11 C -0.101 4.101 12 C -0.128 4.128 13 C 0.512 3.488 14 O -0.587 6.587 15 N -0.702 5.702 16 C 0.116 3.884 17 H 0.086 0.914 18 C -0.122 4.122 19 C -0.075 4.075 20 H 0.107 0.893 21 C -0.070 4.070 22 C -0.049 4.049 23 Cl -0.073 7.073 24 C -0.121 4.121 25 C -0.117 4.117 26 C -0.117 4.117 27 C -0.113 4.113 28 C -0.139 4.139 29 C -0.154 4.154 30 H 0.396 0.604 31 H 0.101 0.899 32 H -0.282 1.282 33 H -0.300 1.300 34 H 0.151 0.849 35 H 0.160 0.840 36 H 0.153 0.847 37 H 0.084 0.916 38 H 0.083 0.917 39 H 0.059 0.941 40 H 0.060 0.940 41 H 0.128 0.872 42 H 0.128 0.872 43 H 0.417 0.583 44 H 0.086 0.914 45 H 0.102 0.898 46 H 0.139 0.861 47 H 0.149 0.851 48 H 0.148 0.852 49 H 0.146 0.854 50 H 0.099 0.901 51 H 0.067 0.933 52 H 0.114 0.886 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.296 0.968 8.392 9.068 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.365 6.365 2 C -0.193 4.193 3 Si 0.697 3.303 4 C -0.086 4.086 5 C -0.176 4.176 6 C -0.090 4.090 7 C -0.224 4.224 8 C 0.071 3.929 9 O -0.254 6.254 10 C -0.016 4.016 11 C -0.140 4.140 12 C -0.167 4.167 13 C 0.300 3.700 14 O -0.467 6.467 15 N -0.354 5.354 16 C 0.010 3.990 17 H 0.105 0.895 18 C -0.160 4.160 19 C -0.093 4.093 20 H 0.125 0.875 21 C -0.071 4.071 22 C -0.076 4.076 23 Cl -0.045 7.045 24 C -0.140 4.140 25 C -0.135 4.135 26 C -0.135 4.135 27 C -0.131 4.131 28 C -0.178 4.178 29 C -0.172 4.172 30 H 0.245 0.755 31 H 0.118 0.882 32 H -0.209 1.209 33 H -0.228 1.228 34 H 0.168 0.832 35 H 0.178 0.822 36 H 0.171 0.829 37 H 0.103 0.897 38 H 0.101 0.899 39 H 0.078 0.922 40 H 0.079 0.921 41 H 0.146 0.854 42 H 0.146 0.854 43 H 0.254 0.746 44 H 0.104 0.896 45 H 0.121 0.879 46 H 0.157 0.843 47 H 0.167 0.833 48 H 0.165 0.835 49 H 0.163 0.837 50 H 0.117 0.883 51 H 0.086 0.914 52 H 0.132 0.868 Dipole moment (debyes) X Y Z Total from point charges 3.384 0.886 6.725 7.580 hybrid contribution 0.185 -0.761 0.107 0.790 sum 3.569 0.125 6.832 7.709 Atomic orbital electron populations 1.86475 1.17329 1.82310 1.50434 1.25395 0.85313 1.11748 0.96848 0.93560 0.77753 0.74334 0.84617 1.20215 0.98187 0.93192 0.96996 1.21184 1.00941 1.00538 0.94908 1.21323 0.96889 0.93542 0.97243 1.21610 1.03790 0.96381 1.00658 1.19207 0.95721 0.83044 0.94979 1.86050 1.74930 1.20435 1.43983 1.22993 0.99898 0.92947 0.85807 1.21149 1.01957 0.92607 0.98257 1.21541 1.05347 0.89883 0.99944 1.21178 0.77873 0.89869 0.81057 1.90735 1.41766 1.76470 1.37688 1.45616 1.57342 1.08877 1.23595 1.21831 0.96475 0.81431 0.99280 0.89546 1.23351 0.98256 1.01091 0.93339 1.21676 0.97884 0.96052 0.93703 0.87544 1.19712 0.98721 0.96632 0.92050 1.21031 1.02884 0.89429 0.94247 1.98358 1.82056 1.37548 1.86496 1.21305 0.99811 0.92352 1.00509 1.21443 0.97933 0.97875 0.96287 1.21595 0.98697 0.99349 0.93820 1.21250 0.98642 0.91995 1.01180 1.23571 0.96419 1.02686 0.95121 1.20338 1.04570 0.94646 0.97691 0.75451 0.88191 1.20904 1.22836 0.83232 0.82199 0.82896 0.89745 0.89896 0.92198 0.92141 0.85430 0.85383 0.74588 0.89575 0.87924 0.84272 0.83347 0.83470 0.83673 0.88260 0.91412 0.86814 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -1.82 12.84 -148.98 -1.91 -3.73 16 2 C -0.08 -0.18 2.80 71.24 0.20 0.02 16 3 Si 0.79 -1.27 29.80 68.60 2.04 0.78 16 4 C -0.09 -0.24 5.35 -19.88 -0.11 -0.35 16 5 C -0.16 0.22 8.67 22.28 0.19 0.41 16 6 C -0.07 0.20 10.04 22.25 0.22 0.42 16 7 C -0.21 0.12 9.04 22.37 0.20 0.32 16 8 C 0.12 0.61 6.69 22.51 0.15 0.76 16 9 O -0.34 -2.19 10.14 -92.35 -0.94 -3.13 16 10 C 0.06 -0.12 4.74 71.98 0.34 0.22 16 11 C -0.10 -0.02 4.87 30.59 0.15 0.13 16 12 C -0.13 0.82 5.70 29.85 0.17 0.99 16 13 C 0.51 0.64 7.83 87.66 0.69 1.33 16 14 O -0.59 -7.07 15.58 -3.02 -0.05 -7.12 16 15 N -0.70 2.60 5.27 -439.74 -2.32 0.28 16 16 C 0.12 -0.20 4.33 45.58 0.20 0.00 16 17 H 0.09 0.25 7.47 -2.39 -0.02 0.23 16 18 C -0.12 0.58 7.29 31.12 0.23 0.80 16 19 C -0.07 0.25 3.64 -11.01 -0.04 0.21 16 20 H 0.11 -0.38 6.58 -2.39 -0.02 -0.40 16 21 C -0.07 0.05 5.29 -19.84 -0.11 -0.06 16 22 C -0.05 -0.05 6.31 22.33 0.14 0.09 16 23 Cl -0.07 -0.06 27.16 -2.72 -0.07 -0.13 16 24 C -0.12 0.02 9.83 22.29 0.22 0.23 16 25 C -0.12 0.26 10.05 22.27 0.22 0.49 16 26 C -0.12 0.34 10.05 22.27 0.22 0.56 16 27 C -0.11 0.26 8.61 22.27 0.19 0.45 16 28 C -0.14 0.31 7.26 31.18 0.23 0.54 16 29 C -0.15 -1.06 9.63 22.37 0.22 -0.85 16 30 H 0.40 -2.12 8.70 -74.06 -0.64 -2.77 16 31 H 0.10 0.42 7.96 -2.39 -0.02 0.40 16 32 H -0.28 -0.71 7.11 99.48 0.71 -0.01 16 33 H -0.30 -1.78 7.11 99.48 0.71 -1.08 16 34 H 0.15 -0.96 4.90 -2.91 -0.01 -0.98 16 35 H 0.16 -1.43 8.06 -2.91 -0.02 -1.45 16 36 H 0.15 -0.93 6.30 -2.91 -0.02 -0.95 16 37 H 0.08 -0.52 7.66 -2.39 -0.02 -0.54 16 38 H 0.08 -0.50 7.66 -2.39 -0.02 -0.52 16 39 H 0.06 0.29 8.10 -2.39 -0.02 0.27 16 40 H 0.06 0.29 8.10 -2.38 -0.02 0.27 16 41 H 0.13 -1.50 8.14 -2.39 -0.02 -1.52 16 42 H 0.13 -1.52 8.14 -2.39 -0.02 -1.54 16 43 H 0.42 -4.05 8.70 -92.71 -0.81 -4.86 16 44 H 0.09 -0.51 8.14 -2.39 -0.02 -0.53 16 45 H 0.10 -0.53 7.72 -2.39 -0.02 -0.55 16 46 H 0.14 -0.32 8.06 -2.91 -0.02 -0.34 16 47 H 0.15 -0.93 8.06 -2.91 -0.02 -0.96 16 48 H 0.15 -1.02 8.06 -2.91 -0.02 -1.04 16 49 H 0.15 -0.80 6.67 -2.91 -0.02 -0.82 16 50 H 0.10 -0.31 6.32 -2.39 -0.02 -0.33 16 51 H 0.07 -0.02 8.14 -2.39 -0.02 -0.04 16 52 H 0.11 1.08 8.06 -2.91 -0.02 1.05 16 Total: 0.00 -25.57 438.71 0.24 -25.33 By element: Atomic # 1 Polarization: -18.55 SS G_CDS: -0.45 Total: -18.99 kcal Atomic # 6 Polarization: 2.78 SS G_CDS: 3.93 Total: 6.71 kcal Atomic # 7 Polarization: 2.60 SS G_CDS: -2.32 Total: 0.28 kcal Atomic # 8 Polarization: -11.08 SS G_CDS: -2.90 Total: -13.98 kcal Atomic # 14 Polarization: -1.27 SS G_CDS: 2.04 Total: 0.78 kcal Atomic # 17 Polarization: -0.06 SS G_CDS: -0.07 Total: -0.13 kcal Total: -25.57 0.24 -25.33 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10565092_4549616.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -11.691 kcal (2) G-P(sol) polarization free energy of solvation -25.574 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -37.265 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.243 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.331 kcal (6) G-S(sol) free energy of system = (1) + (5) -37.022 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.42 seconds