Wall clock time and date at job start Sat Mar 6 2021 13:15:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86305 * 109.46739 * 2 1 4 4 C 1.50693 * 109.47458 * 119.99833 * 2 1 3 5 5 C 1.38264 * 119.94660 * 64.99852 * 4 2 1 6 6 C 1.38145 * 120.06113 * 180.02562 * 5 4 2 7 7 C 1.38732 * 119.94222 * 0.02562 * 6 5 4 8 8 O 1.35893 * 120.06020 * 180.02562 * 7 6 5 9 9 C 1.42901 * 117.00404 * 180.02562 * 8 7 6 10 10 C 1.50701 * 109.46985 * 179.97438 * 9 8 7 11 11 C 1.36417 * 125.80179 * 89.99714 * 10 9 8 12 12 C 1.47381 * 127.19390 * 0.02562 * 11 10 9 13 13 O 1.21613 * 119.99816 * 359.70203 * 12 11 10 14 14 N 1.34777 * 120.00222 * 179.70704 * 12 11 10 15 15 C 1.46498 * 119.99828 * 180.27565 * 14 12 11 16 16 H 1.09002 * 112.85447 * 23.52517 * 15 14 12 17 17 C 1.53782 * 113.61542 * 154.72141 * 15 14 12 18 18 C 1.53779 * 87.08038 * 89.11161 * 17 15 14 19 19 H 1.09002 * 113.61739 * 270.80215 * 18 17 15 20 20 C 1.50699 * 113.61459 * 139.97997 * 18 17 15 21 21 C 1.38329 * 120.00680 * 120.00304 * 20 18 17 22 22 Cl 1.73596 * 120.01399 * 359.95229 * 21 20 18 23 23 C 1.38381 * 119.97565 * 179.97438 * 21 20 18 24 24 C 1.38194 * 119.98509 * 359.97438 * 23 21 20 25 25 C 1.38271 * 120.01101 * 359.97438 * 24 23 21 26 26 C 1.38212 * 120.02504 * 359.75009 * 25 24 23 27 27 C 1.53778 * 113.61220 * 252.21874 * 15 14 12 28 28 C 1.47023 * 105.61634 * 179.75095 * 11 10 9 29 29 C 1.34177 * 105.95272 * 0.22857 * 28 11 10 30 30 O 1.33655 * 125.80288 * 270.14099 * 10 9 8 31 31 C 1.38734 * 119.88782 * 0.27322 * 7 6 5 32 32 C 1.38143 * 119.94473 * 359.47227 * 31 7 6 33 33 H 0.96700 * 114.00423 * 299.99186 * 1 2 3 34 34 H 1.08994 * 109.47069 * 240.00277 * 2 1 3 35 35 H 1.48500 * 110.00048 * 178.68186 * 3 2 1 36 36 H 1.48500 * 109.99607 * 300.00088 * 3 2 1 37 37 H 1.08009 * 119.96813 * 359.97438 * 5 4 2 38 38 H 1.07996 * 120.02956 * 179.97438 * 6 5 4 39 39 H 1.08995 * 109.46860 * 60.00049 * 9 8 7 40 40 H 1.09003 * 109.46774 * 299.99568 * 9 8 7 41 41 H 0.97001 * 119.99727 * 359.97438 * 14 12 11 42 42 H 1.08999 * 113.61850 * 203.66149 * 17 15 14 43 43 H 1.09004 * 113.61464 * 334.48471 * 17 15 14 44 44 H 1.07997 * 120.00602 * 180.02562 * 23 21 20 45 45 H 1.07996 * 119.99048 * 179.97438 * 24 23 21 46 46 H 1.08005 * 119.98135 * 179.97438 * 25 24 23 47 47 H 1.08004 * 119.99125 * 180.27340 * 26 25 24 48 48 H 1.08998 * 113.61637 * 25.42993 * 27 15 14 49 49 H 1.08999 * 113.61924 * 156.33648 * 27 15 14 50 50 H 1.08004 * 127.02145 * 180.20701 * 28 11 10 51 51 H 1.07998 * 125.43940 * 179.97438 * 29 28 11 52 52 H 1.08001 * 120.03032 * 179.72264 * 31 7 6 53 53 H 1.08003 * 119.97739 * 180.27434 * 32 31 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7103 1.2304 5 6 1.6841 -2.0604 1.3973 6 6 2.1431 -2.7138 2.5246 7 6 2.8523 -2.0141 3.4900 8 8 3.3054 -2.6546 4.5996 9 6 4.0276 -1.8709 5.5517 10 6 4.4467 -2.7440 6.7063 11 6 5.6146 -3.4434 6.7951 12 6 6.7000 -3.4952 5.7995 13 8 6.6021 -2.8711 4.7603 14 7 7.8010 -4.2341 6.0406 15 6 8.8825 -4.2807 5.0535 16 1 8.8925 -3.4121 4.3952 17 6 10.2567 -4.6094 5.6604 18 6 9.9145 -6.0915 5.4344 19 1 9.3932 -6.5522 6.2735 20 6 11.0804 -6.9129 4.9475 21 6 11.5293 -7.9874 5.6941 22 17 10.7506 -8.3895 7.1926 23 6 12.5996 -8.7415 5.2461 24 6 13.2191 -8.4211 4.0531 25 6 12.7692 -7.3475 3.3068 26 6 11.6966 -6.5975 3.7510 27 6 8.9785 -5.6222 4.3079 28 6 5.5672 -4.1293 8.0947 29 6 4.3947 -3.7870 8.6499 30 8 3.7361 -2.9669 7.8161 31 6 3.0938 -0.6581 3.3232 32 6 2.6372 -0.0105 2.1916 33 1 -0.3934 0.4416 0.7651 34 1 1.7923 -0.5138 -0.8900 35 1 3.5345 1.7705 0.0321 36 1 1.5613 2.4679 -1.2085 37 1 1.1309 -2.6045 0.6460 38 1 1.9494 -3.7683 2.6546 39 1 3.3903 -1.0661 5.9178 40 1 4.9122 -1.4467 5.0767 41 1 7.8792 -4.7316 6.8697 42 1 11.0951 -4.2582 5.0589 43 1 10.3464 -4.3362 6.7119 44 1 12.9502 -9.5808 5.8284 45 1 14.0547 -9.0093 3.7037 46 1 13.2540 -7.0972 2.3747 47 1 11.3429 -5.7617 3.1654 48 1 8.0359 -6.1680 4.2678 49 1 9.4674 -5.5480 3.3366 50 1 6.3220 -4.7768 8.5161 51 1 4.0376 -4.1186 9.6137 52 1 3.6418 -0.1102 4.0755 53 1 2.8288 1.0442 2.0592 There are 77 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 77 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10565092_4549634.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:15:58 Heat of formation + Delta-G solvation = -1.072760 kcal Electronic energy + Delta-G solvation = -39017.081507 eV Core-core repulsion = 33814.557779 eV Total energy + Delta-G solvation = -5202.523728 eV No. of doubly occupied orbitals = 77 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 440.127 amu Computer time = 2.05 seconds Orbital eigenvalues (eV) -43.73552 -41.61862 -41.30421 -40.33318 -39.24869 -38.82336 -37.42958 -37.18147 -34.88794 -33.91518 -32.85145 -31.99679 -31.74336 -31.68539 -31.39404 -28.03620 -26.77148 -26.51798 -26.11489 -24.74311 -23.83397 -23.66746 -22.78640 -22.40140 -22.14498 -21.08252 -20.10013 -19.51233 -19.24971 -18.37818 -18.19819 -17.46711 -17.23259 -17.17855 -16.98293 -16.76748 -16.58872 -16.46803 -16.31165 -15.95683 -15.91364 -15.74983 -15.46465 -15.15836 -14.95098 -14.79188 -14.73520 -14.64823 -14.44715 -14.35771 -14.20645 -13.85958 -13.70913 -13.56182 -13.48727 -13.40904 -13.13615 -12.95642 -12.70955 -12.49813 -12.28086 -12.17620 -12.08446 -12.07287 -11.80548 -11.77659 -11.55175 -11.30262 -11.19244 -10.98890 -10.41309 -10.20570 -10.06968 -9.87059 -9.83232 -9.60167 -9.25567 -5.00652 -0.06048 0.16328 0.25624 0.26930 0.28066 1.01086 1.14974 1.32706 1.49595 1.64445 1.96608 1.99883 2.07812 2.45059 2.61168 2.63297 3.33007 3.37172 3.54258 3.55737 3.57255 3.63835 3.68454 3.70703 3.79118 3.83616 3.90589 3.92512 3.93870 4.08154 4.10328 4.14645 4.28106 4.36974 4.38121 4.40884 4.44329 4.48757 4.51367 4.64134 4.65061 4.69237 4.72789 4.78760 4.81303 4.87012 4.94180 4.94659 4.98678 5.08860 5.12912 5.23696 5.24422 5.28063 5.39017 5.46297 5.47558 5.55453 5.67328 5.84838 5.86820 6.24862 6.39247 6.79262 7.06075 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.556 6.556 2 C -0.069 4.069 3 Si 0.776 3.224 4 C -0.162 4.162 5 C -0.059 4.059 6 C -0.164 4.164 7 C 0.124 3.876 8 O -0.323 6.323 9 C 0.135 3.865 10 C 0.043 3.957 11 C -0.225 4.225 12 C 0.587 3.413 13 O -0.569 6.569 14 N -0.692 5.692 15 C 0.119 3.881 16 H 0.094 0.906 17 C -0.120 4.120 18 C -0.075 4.075 19 H 0.103 0.897 20 C -0.070 4.070 21 C -0.050 4.050 22 Cl -0.075 7.075 23 C -0.121 4.121 24 C -0.117 4.117 25 C -0.116 4.116 26 C -0.112 4.112 27 C -0.140 4.140 28 C -0.199 4.199 29 C -0.010 4.010 30 O -0.176 6.176 31 C -0.204 4.204 32 C -0.074 4.074 33 H 0.395 0.605 34 H 0.105 0.895 35 H -0.288 1.288 36 H -0.298 1.298 37 H 0.138 0.862 38 H 0.132 0.868 39 H 0.104 0.896 40 H 0.108 0.892 41 H 0.413 0.587 42 H 0.108 0.892 43 H 0.086 0.914 44 H 0.139 0.861 45 H 0.149 0.851 46 H 0.148 0.852 47 H 0.147 0.853 48 H 0.062 0.938 49 H 0.104 0.896 50 H 0.189 0.811 51 H 0.252 0.748 52 H 0.150 0.850 53 H 0.153 0.847 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.070 0.698 5.435 6.282 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.364 6.364 2 C -0.179 4.179 3 Si 0.682 3.318 4 C -0.162 4.162 5 C -0.077 4.077 6 C -0.182 4.182 7 C 0.080 3.920 8 O -0.237 6.237 9 C 0.060 3.940 10 C -0.010 4.010 11 C -0.230 4.230 12 C 0.376 3.624 13 O -0.449 6.449 14 N -0.343 5.343 15 C 0.013 3.987 16 H 0.112 0.888 17 C -0.158 4.158 18 C -0.094 4.094 19 H 0.122 0.878 20 C -0.071 4.071 21 C -0.076 4.076 22 Cl -0.046 7.046 23 C -0.140 4.140 24 C -0.135 4.135 25 C -0.134 4.134 26 C -0.130 4.130 27 C -0.178 4.178 28 C -0.218 4.218 29 C -0.076 4.076 30 O -0.071 6.071 31 C -0.223 4.223 32 C -0.091 4.091 33 H 0.245 0.755 34 H 0.122 0.878 35 H -0.215 1.215 36 H -0.226 1.226 37 H 0.156 0.844 38 H 0.149 0.851 39 H 0.122 0.878 40 H 0.125 0.875 41 H 0.250 0.750 42 H 0.126 0.874 43 H 0.104 0.896 44 H 0.157 0.843 45 H 0.167 0.833 46 H 0.166 0.834 47 H 0.165 0.835 48 H 0.081 0.919 49 H 0.122 0.878 50 H 0.206 0.794 51 H 0.268 0.732 52 H 0.167 0.833 53 H 0.170 0.830 Dipole moment (debyes) X Y Z Total from point charges 3.208 1.289 4.012 5.296 hybrid contribution 0.343 -1.316 0.402 1.418 sum 3.551 -0.026 4.414 5.665 Atomic orbital electron populations 1.86461 1.17296 1.82217 1.50459 1.25114 0.85209 1.10726 0.96838 0.93806 0.77748 0.75405 0.84846 1.20354 1.02698 0.95039 0.98120 1.20940 0.96686 0.93996 0.96058 1.20614 1.02332 1.01037 0.94230 1.19174 0.94432 0.91781 0.86653 1.86049 1.69063 1.38977 1.29659 1.21167 0.98273 0.90750 0.83768 1.22069 0.90641 1.00112 0.88186 1.21358 0.97295 1.05643 0.98669 1.17414 0.81657 0.78428 0.84908 1.90775 1.80284 1.46077 1.27796 1.45349 1.17286 1.49100 1.22530 1.21860 0.86790 0.98776 0.91262 0.88770 1.23363 0.95996 0.93422 1.03040 1.21675 0.93715 0.94700 0.99273 0.87846 1.19693 0.97636 0.94849 0.94912 1.21034 0.97906 0.98738 0.89922 1.98358 1.80463 1.93298 1.32469 1.21304 0.94998 1.00066 0.97618 1.21448 1.00376 0.97798 0.93871 1.21595 0.96263 0.94865 1.00666 1.21253 0.95960 1.00708 0.95070 1.23561 0.99583 0.96108 0.98597 1.23232 1.00794 1.04642 0.93092 1.24894 0.92485 0.93086 0.97122 1.83798 1.44245 1.53933 1.25122 1.21431 1.06165 0.93265 1.01429 1.21019 0.95653 1.00061 0.92380 0.75511 0.87783 1.21506 1.22601 0.84444 0.85054 0.87796 0.87477 0.74955 0.87360 0.89556 0.84293 0.83310 0.83391 0.83542 0.91869 0.87765 0.79424 0.73204 0.83251 0.83038 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -1.00 12.83 -148.98 -1.91 -2.92 16 2 C -0.07 -0.10 2.80 71.23 0.20 0.10 16 3 Si 0.78 -0.63 29.80 68.60 2.04 1.42 16 4 C -0.16 -0.47 5.35 -19.85 -0.11 -0.57 16 5 C -0.06 -0.28 9.68 22.25 0.22 -0.07 16 6 C -0.16 -1.14 9.99 22.37 0.22 -0.91 16 7 C 0.12 0.93 6.69 22.51 0.15 1.09 16 8 O -0.32 -3.01 10.12 -92.35 -0.93 -3.94 16 9 C 0.13 0.62 4.74 71.24 0.34 0.96 16 10 C 0.04 0.22 7.00 25.26 0.18 0.40 16 11 C -0.22 -0.90 6.31 -18.99 -0.12 -1.02 16 12 C 0.59 3.77 7.81 86.65 0.68 4.44 16 13 O -0.57 -7.47 14.45 -4.07 -0.06 -7.53 16 14 N -0.69 -0.09 5.26 -443.34 -2.33 -2.42 16 15 C 0.12 -0.05 4.33 45.52 0.20 0.14 16 16 H 0.09 0.27 7.46 -2.39 -0.02 0.25 16 17 C -0.12 0.49 7.29 31.12 0.23 0.72 16 18 C -0.08 0.16 3.64 -11.01 -0.04 0.12 16 19 H 0.10 -0.19 6.57 -2.39 -0.02 -0.21 16 20 C -0.07 0.01 5.29 -19.84 -0.10 -0.10 16 21 C -0.05 -0.09 6.31 22.33 0.14 0.06 16 22 Cl -0.07 -0.13 27.16 -2.72 -0.07 -0.20 16 23 C -0.12 -0.04 9.83 22.29 0.22 0.18 16 24 C -0.12 0.23 10.05 22.27 0.22 0.45 16 25 C -0.12 0.31 10.05 22.27 0.22 0.54 16 26 C -0.11 0.23 8.63 22.26 0.19 0.42 16 27 C -0.14 0.12 7.25 31.12 0.23 0.35 16 28 C -0.20 0.60 10.60 23.65 0.25 0.85 16 29 C -0.01 0.04 12.03 66.89 0.80 0.85 16 30 O -0.18 -0.44 10.52 4.44 0.05 -0.40 16 31 C -0.20 -0.68 9.04 22.37 0.20 -0.47 16 32 C -0.07 -0.09 8.66 22.26 0.19 0.10 16 33 H 0.39 -2.50 8.70 -74.06 -0.64 -3.15 16 34 H 0.10 0.28 7.96 -2.39 -0.02 0.26 16 35 H -0.29 -1.24 7.11 99.48 0.71 -0.53 16 36 H -0.30 -1.91 7.11 99.48 0.71 -1.20 16 37 H 0.14 0.41 8.06 -2.91 -0.02 0.39 16 38 H 0.13 0.78 8.06 -2.91 -0.02 0.76 16 39 H 0.10 -0.07 7.65 -2.39 -0.02 -0.09 16 40 H 0.11 0.61 6.02 -2.39 -0.01 0.60 16 41 H 0.41 -2.01 7.87 -92.71 -0.73 -2.74 16 42 H 0.11 -0.58 7.74 -2.39 -0.02 -0.60 16 43 H 0.09 -0.44 8.14 -2.39 -0.02 -0.46 16 44 H 0.14 -0.25 8.06 -2.91 -0.02 -0.27 16 45 H 0.15 -0.90 8.06 -2.91 -0.02 -0.92 16 46 H 0.15 -1.01 8.06 -2.91 -0.02 -1.04 16 47 H 0.15 -0.81 6.64 -2.91 -0.02 -0.82 16 48 H 0.06 0.14 8.14 -2.39 -0.02 0.12 16 49 H 0.10 -0.26 6.29 -2.39 -0.02 -0.28 16 50 H 0.19 -1.80 7.74 -2.91 -0.02 -1.83 16 51 H 0.25 -3.29 8.06 -2.91 -0.02 -3.31 16 52 H 0.15 -0.16 6.30 -2.91 -0.02 -0.18 16 53 H 0.15 -0.62 4.90 -2.91 -0.01 -0.64 16 Total: 0.00 -24.42 454.19 1.16 -23.26 By element: Atomic # 1 Polarization: -15.54 SS G_CDS: -0.33 Total: -15.88 kcal Atomic # 6 Polarization: 3.89 SS G_CDS: 4.71 Total: 8.60 kcal Atomic # 7 Polarization: -0.09 SS G_CDS: -2.33 Total: -2.42 kcal Atomic # 8 Polarization: -11.92 SS G_CDS: -2.86 Total: -14.78 kcal Atomic # 14 Polarization: -0.63 SS G_CDS: 2.04 Total: 1.42 kcal Atomic # 17 Polarization: -0.13 SS G_CDS: -0.07 Total: -0.20 kcal Total: -24.42 1.16 -23.26 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10565092_4549634.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 22.191 kcal (2) G-P(sol) polarization free energy of solvation -24.420 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -2.229 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.156 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.264 kcal (6) G-S(sol) free energy of system = (1) + (5) -1.073 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.05 seconds