Wall clock time and date at job start Sat Mar 6 2021 13:16:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.35988 * 117.00304 * 2 1 4 4 C 1.39155 * 120.07714 * 180.02562 * 3 2 1 5 5 O 1.35994 * 120.07069 * 0.25048 * 4 3 2 6 6 C 1.42896 * 117.00300 * 179.72410 * 5 4 3 7 7 C 1.50700 * 109.47407 * 180.02562 * 6 5 4 8 8 O 1.21280 * 120.00072 * 0.02562 * 7 6 5 9 9 N 1.34780 * 119.99757 * 180.02562 * 7 6 5 10 10 C 1.46500 * 119.99890 * 180.02562 * 9 7 6 11 11 H 1.09005 * 112.84637 * 336.20060 * 10 9 7 12 12 C 1.53781 * 113.61431 * 107.49888 * 10 9 7 13 13 C 1.53780 * 87.08061 * 89.11667 * 12 10 9 14 14 H 1.08994 * 113.61558 * 270.88534 * 13 12 10 15 15 C 1.50707 * 113.68937 * 139.98670 * 13 12 10 16 16 C 1.38336 * 120.00146 * 142.19641 * 15 13 12 17 17 Cl 1.73595 * 120.01405 * 359.97139 * 16 15 13 18 18 C 1.38369 * 119.96825 * 179.74911 * 16 15 13 19 19 C 1.38192 * 119.99104 * 0.54748 * 18 16 15 20 20 C 1.38270 * 120.00983 * 359.70251 * 19 18 16 21 21 C 1.38220 * 120.02478 * 0.02562 * 20 19 18 22 22 C 1.53777 * 113.61815 * 204.99693 * 10 9 7 23 23 C 1.38565 * 119.85574 * 179.97438 * 4 3 2 24 24 C 1.38238 * 119.99937 * 359.97438 * 23 4 3 25 25 N 1.48004 * 119.92674 * 180.02562 * 24 23 4 26 26 O 1.21801 * 120.00128 * 0.02562 * 25 24 23 27 27 O 1.21801 * 119.99893 * 179.97438 * 25 24 23 28 28 C 1.38258 * 120.14633 * 359.97438 * 24 23 4 29 29 C 1.50700 * 119.92518 * 180.02562 * 28 24 23 30 30 O 1.42899 * 109.46852 * 75.00002 * 29 28 24 31 31 Si 1.86293 * 109.47109 * 195.00026 * 29 28 24 32 32 C 1.38237 * 120.14693 * 359.97438 * 28 24 23 33 33 H 1.08995 * 109.47042 * 300.00062 * 1 2 3 34 34 H 1.08999 * 109.47160 * 59.99918 * 1 2 3 35 35 H 1.09007 * 109.46912 * 179.97438 * 1 2 3 36 36 H 1.09004 * 109.46958 * 300.00851 * 6 5 4 37 37 H 1.09004 * 109.47039 * 59.99803 * 6 5 4 38 38 H 0.96999 * 120.00469 * 359.97438 * 9 7 6 39 39 H 1.09008 * 113.61128 * 203.66456 * 12 10 9 40 40 H 1.09001 * 113.61547 * 334.57017 * 12 10 9 41 41 H 1.08003 * 120.00641 * 180.22677 * 18 16 15 42 42 H 1.07996 * 119.99779 * 179.73103 * 19 18 16 43 43 H 1.07998 * 119.98660 * 180.02562 * 20 19 18 44 44 H 1.07997 * 119.99029 * 179.97438 * 21 20 19 45 45 H 1.09001 * 113.60756 * 25.43187 * 22 10 9 46 46 H 1.08996 * 113.61540 * 156.33032 * 22 10 9 47 47 H 1.08000 * 119.99519 * 180.02562 * 23 4 3 48 48 H 1.08996 * 109.46975 * 315.00433 * 29 28 24 49 49 H 0.96699 * 114.00512 * 60.00138 * 30 29 28 50 50 H 1.48503 * 109.99951 * 58.68396 * 31 29 28 51 51 H 1.48495 * 110.00099 * 179.97438 * 31 29 28 52 52 H 1.07993 * 119.99994 * 180.02562 * 32 28 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2116 0.0000 4 6 3.4360 1.2863 -0.0005 5 8 4.1795 0.1476 -0.0062 6 6 5.6003 0.3005 -0.0125 7 6 6.2518 -1.0584 -0.0188 8 8 5.5669 -2.0593 -0.0185 9 7 7.5957 -1.1613 -0.0249 10 6 8.2290 -2.4823 -0.0316 11 1 7.5850 -3.2625 0.3742 12 6 8.8717 -2.8505 -1.3793 13 6 10.1547 -2.1791 -0.8616 14 1 10.2098 -1.1134 -1.0835 15 6 11.4154 -2.9192 -1.2276 16 6 12.5566 -2.2154 -1.5682 17 17 12.5366 -0.4796 -1.5749 18 6 13.7152 -2.8956 -1.8990 19 6 13.7287 -4.2775 -1.9000 20 6 12.5862 -4.9804 -1.5645 21 6 11.4301 -4.3014 -1.2285 22 6 9.6494 -2.4875 0.5577 23 6 4.0603 2.5233 -0.0011 24 6 3.3030 3.6797 -0.0016 25 7 3.9716 5.0002 -0.0028 26 8 5.1878 5.0670 -0.0037 27 8 3.3056 6.0200 -0.0037 28 6 1.9224 3.6056 -0.0021 29 6 1.1017 4.8695 -0.0033 30 8 1.1353 5.4580 -1.3051 31 14 -0.6595 4.4667 0.4508 32 6 1.2933 2.3747 -0.0027 33 1 -0.3633 0.5138 0.8899 34 1 -0.3633 0.5138 -0.8900 35 1 -0.3633 -1.0277 -0.0005 36 1 5.9024 0.8521 -0.9028 37 1 5.9107 0.8486 0.8771 38 1 8.1435 -0.3608 -0.0256 39 1 8.9734 -3.9245 -1.5356 40 1 8.4240 -2.3383 -2.2310 41 1 14.6076 -2.3467 -2.1615 42 1 14.6317 -4.8085 -2.1625 43 1 12.5972 -6.0603 -1.5650 44 1 10.5380 -4.8510 -0.9669 45 1 9.8295 -1.6822 1.2698 46 1 9.9637 -3.4621 0.9310 47 1 5.1386 2.5838 -0.0019 48 1 1.5130 5.5705 0.7230 49 1 0.7837 4.8889 -2.0033 50 1 -0.7049 3.8250 1.7893 51 1 -1.4792 5.7049 0.4538 52 1 0.2147 2.3196 -0.0035 There are 79 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 79 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10565092_4549636.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:16:03 Heat of formation + Delta-G solvation = -43.698131 kcal Electronic energy + Delta-G solvation = -41325.194034 eV Core-core repulsion = 35674.483917 eV Total energy + Delta-G solvation = -5650.710117 eV No. of doubly occupied orbitals = 79 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 449.121 amu Computer time = 2.02 seconds Orbital eigenvalues (eV) -43.41394 -42.14680 -41.65204 -40.65812 -39.72868 -39.23630 -38.72358 -37.74341 -37.41709 -37.13601 -34.77923 -32.69245 -32.59082 -31.90103 -31.67158 -29.80417 -28.75027 -27.92286 -26.74568 -26.28882 -25.72712 -24.05418 -23.67874 -23.23174 -22.65333 -22.00749 -20.79987 -20.21865 -19.85504 -19.51844 -18.84847 -18.69288 -18.39500 -18.22110 -17.76306 -17.65310 -17.36912 -17.02743 -16.85029 -16.58295 -16.40617 -16.34799 -16.09299 -15.69154 -15.69069 -15.19233 -15.13587 -14.87237 -14.78665 -14.74970 -14.44451 -14.37274 -13.98759 -13.89267 -13.57695 -13.45622 -13.38030 -13.04614 -12.96383 -12.70024 -12.67909 -12.51689 -12.48089 -12.44325 -12.33631 -12.28785 -12.21510 -12.16555 -11.79337 -11.78440 -11.53580 -11.28463 -11.11428 -10.54125 -10.46819 -10.22576 -9.84135 -9.58739 -9.50051 -5.13862 -1.37882 -0.44481 0.14960 0.17653 0.28302 0.29426 1.12457 1.16545 1.20664 1.34687 1.57093 1.88687 1.89108 1.93665 2.30657 2.62503 2.97084 3.16196 3.25797 3.39106 3.43579 3.48846 3.55222 3.58909 3.64397 3.84796 3.86129 3.91555 3.92827 3.96330 4.04761 4.10247 4.10694 4.16318 4.21976 4.38599 4.39335 4.39604 4.41644 4.54192 4.60254 4.71399 4.72423 4.74882 4.80395 4.82248 4.88204 4.97146 5.00512 5.09350 5.23711 5.29462 5.37601 5.48785 5.53618 5.59712 5.86261 6.05267 6.34272 6.45080 6.71001 7.03170 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.005 4.005 2 O -0.307 6.307 3 C 0.172 3.828 4 C 0.100 3.900 5 O -0.289 6.289 6 C 0.026 3.974 7 C 0.521 3.479 8 O -0.562 6.562 9 N -0.695 5.695 10 C 0.119 3.881 11 H 0.093 0.907 12 C -0.139 4.139 13 C -0.078 4.078 14 H 0.105 0.895 15 C -0.070 4.070 16 C -0.050 4.050 17 Cl -0.075 7.075 18 C -0.122 4.122 19 C -0.118 4.118 20 C -0.116 4.116 21 C -0.111 4.111 22 C -0.122 4.122 23 C -0.111 4.111 24 C -0.047 4.047 25 N 0.036 4.964 26 O -0.189 6.189 27 O -0.165 6.165 28 C -0.040 4.040 29 C -0.092 4.092 30 O -0.536 6.536 31 Si 0.788 3.212 32 C -0.163 4.163 33 H 0.080 0.920 34 H 0.093 0.907 35 H 0.122 0.878 36 H 0.127 0.873 37 H 0.127 0.873 38 H 0.419 0.581 39 H 0.104 0.896 40 H 0.068 0.932 41 H 0.138 0.862 42 H 0.148 0.852 43 H 0.148 0.852 44 H 0.148 0.852 45 H 0.086 0.914 46 H 0.107 0.893 47 H 0.182 0.818 48 H 0.114 0.886 49 H 0.393 0.607 50 H -0.271 1.271 51 H -0.290 1.290 52 H 0.195 0.805 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.754 -6.684 -0.979 6.979 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.098 4.098 2 O -0.218 6.218 3 C 0.123 3.877 4 C 0.053 3.947 5 O -0.201 6.201 6 C -0.052 4.052 7 C 0.307 3.693 8 O -0.439 6.439 9 N -0.348 5.348 10 C 0.014 3.986 11 H 0.111 0.889 12 C -0.177 4.177 13 C -0.096 4.096 14 H 0.123 0.877 15 C -0.071 4.071 16 C -0.076 4.076 17 Cl -0.046 7.046 18 C -0.141 4.141 19 C -0.136 4.136 20 C -0.134 4.134 21 C -0.129 4.129 22 C -0.160 4.160 23 C -0.130 4.130 24 C -0.131 4.131 25 N 0.549 4.451 26 O -0.399 6.399 27 O -0.379 6.379 28 C -0.042 4.042 29 C -0.200 4.200 30 O -0.343 6.343 31 Si 0.690 3.310 32 C -0.181 4.181 33 H 0.098 0.902 34 H 0.112 0.888 35 H 0.140 0.860 36 H 0.145 0.855 37 H 0.145 0.855 38 H 0.257 0.743 39 H 0.122 0.878 40 H 0.087 0.913 41 H 0.156 0.844 42 H 0.166 0.834 43 H 0.166 0.834 44 H 0.166 0.834 45 H 0.105 0.895 46 H 0.125 0.875 47 H 0.199 0.801 48 H 0.132 0.868 49 H 0.242 0.758 50 H -0.197 1.197 51 H -0.217 1.217 52 H 0.211 0.789 Dipole moment (debyes) X Y Z Total from point charges -2.900 -7.653 -0.090 8.185 hybrid contribution 1.513 1.621 0.127 2.221 sum -1.387 -6.033 0.037 6.190 Atomic orbital electron populations 1.23823 0.74649 1.07123 1.04207 1.86333 1.24890 1.24449 1.86148 1.18666 0.89105 0.86420 0.93484 1.17963 0.88857 0.85066 1.02814 1.86297 1.18338 1.26778 1.88724 1.22902 0.78917 0.96091 1.07250 1.20256 0.82883 0.90412 0.75760 1.90780 1.63778 1.39665 1.49675 1.45391 1.05176 1.09807 1.74466 1.21849 0.94052 0.85138 0.97586 0.88897 1.23562 0.94607 1.02270 0.97272 1.21713 0.90416 1.00063 0.97398 0.87652 1.19706 0.93926 0.94064 0.99374 1.21042 0.96309 0.84410 1.05887 1.98363 1.98547 1.10528 1.97176 1.21298 0.97229 0.95294 1.00274 1.21441 0.99829 0.93110 0.99185 1.21599 0.92558 1.01626 0.97640 1.21257 0.99509 0.92612 0.99547 1.23373 0.92581 1.04422 0.95601 1.20897 1.02962 0.88220 1.00940 1.20561 0.92792 0.81880 1.17862 1.43727 1.00819 1.03458 0.97139 1.94506 0.96539 1.94136 1.54693 1.94575 1.64393 1.25447 1.53457 1.20233 0.91019 0.97712 0.95223 1.25785 1.10694 0.92761 0.90780 1.86669 1.87128 1.44600 1.15933 0.94390 0.71679 0.82180 0.82778 1.21085 1.01789 0.88056 1.07175 0.90162 0.88815 0.86016 0.85493 0.85495 0.74348 0.87817 0.91273 0.84434 0.83418 0.83401 0.83402 0.89499 0.87512 0.80101 0.86836 0.75796 1.19721 1.21747 0.78901 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.00 0.05 9.81 113.37 1.11 1.16 16 2 O -0.31 0.19 10.28 -79.55 -0.82 -0.63 16 3 C 0.17 -0.21 6.70 22.57 0.15 -0.06 16 4 C 0.10 0.06 6.70 22.57 0.15 0.21 16 5 O -0.29 -0.92 9.45 -67.07 -0.63 -1.55 16 6 C 0.03 -0.11 5.22 71.24 0.37 0.27 16 7 C 0.52 0.66 7.91 87.66 0.69 1.35 16 8 O -0.56 -6.68 16.10 16.00 0.26 -6.43 16 9 N -0.69 3.18 5.26 -440.03 -2.32 0.86 16 10 C 0.12 -0.38 4.32 45.52 0.20 -0.19 16 11 H 0.09 0.07 7.46 -2.38 -0.02 0.05 16 12 C -0.14 0.50 7.26 31.12 0.23 0.73 16 13 C -0.08 0.32 3.64 -11.01 -0.04 0.28 16 14 H 0.11 -0.42 6.57 -2.39 -0.02 -0.44 16 15 C -0.07 0.09 5.29 -19.84 -0.11 -0.02 16 16 C -0.05 -0.05 6.31 22.32 0.14 0.09 16 17 Cl -0.08 -0.10 27.15 -2.72 -0.07 -0.17 16 18 C -0.12 0.00 9.83 22.29 0.22 0.22 16 19 C -0.12 0.28 10.05 22.27 0.22 0.50 16 20 C -0.12 0.40 10.05 22.27 0.22 0.62 16 21 C -0.11 0.35 8.61 22.26 0.19 0.54 16 22 C -0.12 0.72 7.29 31.12 0.23 0.95 16 23 C -0.11 0.03 8.54 22.35 0.19 0.22 16 24 C -0.05 -0.17 6.85 36.38 0.25 0.08 16 25 N 0.04 0.36 4.45 -46.46 -0.21 0.15 16 26 O -0.19 -2.12 18.44 18.88 0.35 -1.77 16 27 O -0.16 -2.18 14.62 25.10 0.37 -1.81 16 28 C -0.04 0.02 5.26 -19.86 -0.10 -0.09 16 29 C -0.09 -0.02 1.74 71.24 0.12 0.10 16 30 O -0.54 -0.72 11.80 -129.62 -1.53 -2.25 16 31 Si 0.79 -4.19 29.91 68.60 2.05 -2.14 16 32 C -0.16 0.86 7.65 22.35 0.17 1.03 16 33 H 0.08 -1.07 7.67 -2.39 -0.02 -1.09 16 34 H 0.09 -1.44 7.66 -2.39 -0.02 -1.46 16 35 H 0.12 -1.44 8.14 -2.38 -0.02 -1.46 16 36 H 0.13 -1.23 7.67 -2.38 -0.02 -1.25 16 37 H 0.13 -1.24 7.66 -2.39 -0.02 -1.26 16 38 H 0.42 -4.41 8.70 -92.71 -0.81 -5.21 16 39 H 0.10 -0.51 6.32 -2.38 -0.02 -0.52 16 40 H 0.07 -0.12 8.14 -2.39 -0.02 -0.14 16 41 H 0.14 -0.26 8.06 -2.91 -0.02 -0.28 16 42 H 0.15 -0.93 8.06 -2.91 -0.02 -0.96 16 43 H 0.15 -1.12 8.06 -2.91 -0.02 -1.14 16 44 H 0.15 -1.02 6.67 -2.91 -0.02 -1.04 16 45 H 0.09 -0.60 8.14 -2.39 -0.02 -0.62 16 46 H 0.11 -0.71 7.72 -2.39 -0.02 -0.73 16 47 H 0.18 -0.82 5.85 -2.91 -0.02 -0.84 16 48 H 0.11 0.58 6.07 -2.39 -0.01 0.56 16 49 H 0.39 -3.41 8.70 -74.06 -0.64 -4.06 16 50 H -0.27 0.55 7.11 99.48 0.71 1.26 16 51 H -0.29 -0.80 7.11 99.48 0.71 -0.09 16 52 H 0.19 -2.45 3.36 -2.91 -0.01 -2.46 16 Total: 0.00 -32.60 447.38 1.70 -30.90 By element: Atomic # 1 Polarization: -22.80 SS G_CDS: -0.37 Total: -23.17 kcal Atomic # 6 Polarization: 3.40 SS G_CDS: 4.61 Total: 8.01 kcal Atomic # 7 Polarization: 3.54 SS G_CDS: -2.52 Total: 1.01 kcal Atomic # 8 Polarization: -12.44 SS G_CDS: -2.01 Total: -14.44 kcal Atomic # 14 Polarization: -4.19 SS G_CDS: 2.05 Total: -2.14 kcal Atomic # 17 Polarization: -0.10 SS G_CDS: -0.07 Total: -0.17 kcal Total: -32.60 1.70 -30.90 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10565092_4549636.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -12.797 kcal (2) G-P(sol) polarization free energy of solvation -32.596 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -45.393 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.695 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.901 kcal (6) G-S(sol) free energy of system = (1) + (5) -43.698 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.02 seconds