Wall clock time and date at job start Sat Mar 6 2021 13:16:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86302 * 109.47338 * 2 1 4 4 C 1.50700 * 109.47245 * 239.99540 * 2 1 3 5 5 C 1.38243 * 119.94212 * 299.97809 * 4 2 1 6 6 C 1.38168 * 120.05338 * 179.76609 * 5 4 2 7 7 N 1.48002 * 120.02856 * 180.26176 * 6 5 4 8 8 O 1.21797 * 120.00497 * 0.26747 * 7 6 5 9 9 O 1.21807 * 119.99702 * 180.27962 * 7 6 5 10 10 C 1.38709 * 119.94275 * 0.53386 * 6 5 4 11 11 O 1.35902 * 120.05564 * 179.74942 * 10 6 5 12 12 C 1.42900 * 116.99916 * 179.72324 * 11 10 6 13 13 C 1.50703 * 109.47361 * 179.97438 * 12 11 10 14 14 O 1.21283 * 119.99488 * 359.97438 * 13 12 11 15 15 N 1.34777 * 120.00290 * 180.02562 * 13 12 11 16 16 C 1.46498 * 119.99828 * 180.27728 * 15 13 12 17 17 H 1.09001 * 112.85160 * 25.05344 * 16 15 13 18 18 C 1.53784 * 113.61507 * 156.25317 * 16 15 13 19 19 C 1.53777 * 87.08269 * 89.11382 * 18 16 15 20 20 H 1.09007 * 113.61513 * 270.88559 * 19 18 16 21 21 C 1.50690 * 113.61484 * 139.98200 * 19 18 16 22 22 C 1.38334 * 120.00646 * 119.99792 * 21 19 18 23 23 Cl 1.73599 * 120.01348 * 0.02562 * 22 21 19 24 24 C 1.38373 * 119.97227 * 179.97438 * 22 21 19 25 25 C 1.38190 * 119.98966 * 0.02562 * 24 22 21 26 26 C 1.38261 * 120.01122 * 0.02562 * 25 24 22 27 27 C 1.38221 * 120.02811 * 359.71007 * 26 25 24 28 28 C 1.53781 * 113.61116 * 253.85697 * 16 15 13 29 29 C 1.38757 * 119.89064 * 359.46980 * 10 6 5 30 30 C 1.38130 * 119.94015 * 0.25266 * 29 10 6 31 31 H 0.96705 * 114.00397 * 300.00646 * 1 2 3 32 32 H 1.09005 * 109.46964 * 120.00014 * 2 1 3 33 33 H 1.48504 * 109.99468 * 299.99536 * 3 2 1 34 34 H 1.48493 * 110.00208 * 61.31334 * 3 2 1 35 35 H 1.08001 * 119.97787 * 0.02846 * 5 4 2 36 36 H 1.08998 * 109.47421 * 59.99643 * 12 11 10 37 37 H 1.09002 * 109.47461 * 299.99906 * 12 11 10 38 38 H 0.97001 * 119.99727 * 359.97438 * 15 13 12 39 39 H 1.08996 * 113.61507 * 203.66303 * 18 16 15 40 40 H 1.09002 * 113.61214 * 334.47664 * 18 16 15 41 41 H 1.08002 * 120.00520 * 179.97438 * 24 22 21 42 42 H 1.08005 * 119.99549 * 179.97438 * 25 24 22 43 43 H 1.08003 * 119.98283 * 179.97438 * 26 25 24 44 44 H 1.07992 * 119.99440 * 180.29649 * 27 26 25 45 45 H 1.08993 * 113.61427 * 25.43567 * 28 16 15 46 46 H 1.09003 * 113.61197 * 156.33752 * 28 16 15 47 47 H 1.07993 * 120.03213 * 180.23276 * 29 10 6 48 48 H 1.07997 * 119.96770 * 180.02562 * 30 29 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2304 5 6 1.5970 -2.0342 -1.4476 6 6 2.0523 -2.6864 -2.5774 7 7 1.6893 -4.1019 -2.8123 8 8 0.9849 -4.6909 -2.0121 9 8 2.0952 -4.6778 -3.8059 10 6 2.8546 -2.0152 -3.4883 11 8 3.3080 -2.6560 -4.5977 12 6 4.1244 -1.9009 -5.4950 13 6 4.5303 -2.7700 -6.6573 14 8 4.1574 -3.9228 -6.7116 15 7 5.3084 -2.2666 -7.6358 16 6 5.6979 -3.1099 -8.7687 17 1 4.9964 -3.9238 -8.9514 18 6 6.0605 -2.3136 -10.0334 19 6 7.5020 -2.2729 -9.4994 20 1 7.7054 -1.4167 -8.8562 21 6 8.5471 -2.4654 -10.5677 22 6 9.4871 -1.4779 -10.8019 23 17 9.4635 -0.0168 -9.8647 24 6 10.4469 -1.6556 -11.7827 25 6 10.4655 -2.8191 -12.5281 26 6 9.5251 -3.8053 -12.2943 27 6 8.5696 -3.6307 -11.3110 28 6 7.1673 -3.5613 -8.7240 29 6 3.1888 -0.6866 -3.2679 30 6 2.7263 -0.0374 -2.1398 31 1 -0.3934 0.4418 0.7650 32 1 1.7923 -0.5139 0.8900 33 1 1.5615 2.4678 -1.2086 34 1 1.5879 2.4586 1.2241 35 1 0.9759 -2.5577 -0.7359 36 1 5.0159 -1.5552 -4.9716 37 1 3.5627 -1.0419 -5.8620 38 1 5.6069 -1.3447 -7.5922 39 1 5.9523 -2.8850 -10.9552 40 1 5.5844 -1.3343 -10.0842 41 1 11.1807 -0.8848 -11.9662 42 1 11.2144 -2.9577 -13.2939 43 1 9.5399 -4.7143 -12.8774 44 1 7.8383 -4.4034 -11.1256 45 1 7.5853 -3.5882 -7.7178 46 1 7.3611 -4.4734 -9.2886 47 1 3.8102 -0.1607 -3.9775 48 1 2.9858 0.9968 -1.9681 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10565092_4549638.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:16:08 Heat of formation + Delta-G solvation = -15.025553 kcal Electronic energy + Delta-G solvation = -36292.673371 eV Core-core repulsion = 31117.426401 eV Total energy + Delta-G solvation = -5175.246969 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 419.106 amu Computer time = 1.62 seconds Orbital eigenvalues (eV) -43.29644 -41.87730 -41.43858 -40.44261 -39.48881 -38.68455 -37.63031 -37.49309 -37.39258 -34.73695 -33.51856 -32.37311 -31.91646 -31.65776 -29.78359 -27.82233 -26.72599 -26.66117 -26.06101 -24.21322 -23.68870 -22.85012 -22.55754 -21.90734 -20.48455 -20.17273 -19.78424 -19.08419 -18.74189 -18.64963 -18.51925 -18.10615 -17.57486 -17.41705 -16.97348 -16.58631 -16.47845 -16.33866 -15.94679 -15.79103 -15.59070 -15.33607 -15.12814 -14.80289 -14.75930 -14.47640 -14.30589 -14.16751 -13.90816 -13.75199 -13.49602 -13.35125 -13.14805 -12.96048 -12.71838 -12.69877 -12.67395 -12.46405 -12.35115 -12.27442 -12.15617 -12.12256 -11.91166 -11.76025 -11.51073 -11.25408 -11.03852 -10.83226 -10.61773 -10.17395 -9.82597 -9.77178 -9.56948 -4.93406 -1.30849 -0.24109 0.15905 0.19197 0.29665 0.34876 1.17880 1.19080 1.25731 1.43639 1.62803 1.97536 2.02635 2.30179 2.63816 3.06015 3.21402 3.30089 3.41768 3.53168 3.57391 3.61726 3.68511 3.70248 3.86615 3.86868 3.94939 3.95144 4.02911 4.11845 4.18321 4.23662 4.32684 4.40326 4.41014 4.51267 4.62162 4.63809 4.73291 4.76881 4.82774 4.85642 4.91557 4.99001 5.02362 5.07255 5.12441 5.18885 5.30605 5.41172 5.50543 5.58907 5.75510 5.87374 6.42344 6.43417 6.52965 7.13925 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.562 6.562 2 C -0.094 4.094 3 Si 0.785 3.215 4 C -0.112 4.112 5 C -0.004 4.004 6 C -0.105 4.105 7 N 0.035 4.965 8 O -0.203 6.203 9 O -0.171 6.171 10 C 0.194 3.806 11 O -0.290 6.290 12 C 0.023 3.977 13 C 0.512 3.488 14 O -0.562 6.562 15 N -0.692 5.692 16 C 0.118 3.882 17 H 0.085 0.915 18 C -0.121 4.121 19 C -0.074 4.074 20 H 0.111 0.889 21 C -0.070 4.070 22 C -0.048 4.048 23 Cl -0.072 7.072 24 C -0.122 4.122 25 C -0.118 4.118 26 C -0.118 4.118 27 C -0.113 4.113 28 C -0.141 4.141 29 C -0.188 4.188 30 C -0.007 4.007 31 H 0.399 0.601 32 H 0.100 0.900 33 H -0.280 1.280 34 H -0.291 1.291 35 H 0.151 0.849 36 H 0.147 0.853 37 H 0.143 0.857 38 H 0.421 0.579 39 H 0.102 0.898 40 H 0.091 0.909 41 H 0.139 0.861 42 H 0.148 0.852 43 H 0.146 0.854 44 H 0.145 0.855 45 H 0.069 0.931 46 H 0.099 0.901 47 H 0.208 0.792 48 H 0.187 0.813 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.594 11.785 -0.745 14.040 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.373 6.373 2 C -0.201 4.201 3 Si 0.688 3.312 4 C -0.113 4.113 5 C -0.023 4.023 6 C -0.190 4.190 7 N 0.545 4.455 8 O -0.410 6.410 9 O -0.386 6.386 10 C 0.144 3.856 11 O -0.200 6.200 12 C -0.054 4.054 13 C 0.298 3.702 14 O -0.439 6.439 15 N -0.346 5.346 16 C 0.013 3.987 17 H 0.103 0.897 18 C -0.158 4.158 19 C -0.092 4.092 20 H 0.129 0.871 21 C -0.071 4.071 22 C -0.075 4.075 23 Cl -0.043 7.043 24 C -0.140 4.140 25 C -0.136 4.136 26 C -0.136 4.136 27 C -0.131 4.131 28 C -0.179 4.179 29 C -0.206 4.206 30 C -0.024 4.024 31 H 0.250 0.750 32 H 0.117 0.883 33 H -0.207 1.207 34 H -0.218 1.218 35 H 0.169 0.831 36 H 0.164 0.836 37 H 0.160 0.840 38 H 0.259 0.741 39 H 0.121 0.879 40 H 0.109 0.891 41 H 0.157 0.843 42 H 0.165 0.835 43 H 0.164 0.836 44 H 0.163 0.837 45 H 0.088 0.912 46 H 0.117 0.883 47 H 0.225 0.775 48 H 0.203 0.797 Dipole moment (debyes) X Y Z Total from point charges 7.320 12.022 -1.192 14.125 hybrid contribution -1.312 -0.589 0.615 1.564 sum 6.008 11.432 -0.577 12.928 Atomic orbital electron populations 1.86544 1.18439 1.80993 1.51305 1.25229 0.84385 1.13047 0.97436 0.94238 0.89293 0.70227 0.77439 1.19462 1.01161 0.91976 0.98734 1.20832 0.93933 0.94842 0.92734 1.20837 1.13325 0.81739 1.03087 1.43860 0.98255 1.03888 0.99482 1.94495 1.35817 1.68310 1.42380 1.94676 1.56420 1.69169 1.18300 1.18936 0.89665 0.92025 0.85006 1.86466 1.63658 1.39631 1.30261 1.23131 0.98265 0.94465 0.89493 1.20476 0.78217 0.87676 0.83874 1.90850 1.55143 1.20089 1.77828 1.45314 1.51370 1.16432 1.21527 1.21812 0.96137 0.94441 0.86340 0.89652 1.23349 0.93768 1.01869 0.96858 1.21747 0.92620 0.99638 0.95168 0.87141 1.19709 0.95937 0.93360 0.98068 1.21013 0.99420 0.89553 0.97478 1.98356 1.98128 1.35478 1.72307 1.21302 0.98266 0.99263 0.95190 1.21434 0.99549 0.92911 0.99703 1.21584 0.94468 0.99950 0.97559 1.21254 0.99569 0.96834 0.95443 1.23604 0.95373 0.97876 1.01064 1.21789 1.06211 0.90497 1.02142 1.21666 0.89943 1.01060 0.89772 0.74952 0.88251 1.20720 1.21819 0.83101 0.83578 0.83958 0.74061 0.87913 0.89090 0.84288 0.83466 0.83632 0.83722 0.91223 0.88313 0.77544 0.79662 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 0.84 12.74 -148.98 -1.90 -1.05 16 2 C -0.09 0.56 2.81 71.24 0.20 0.76 16 3 Si 0.79 -7.62 29.78 68.60 2.04 -5.58 16 4 C -0.11 0.35 5.42 -19.85 -0.11 0.25 16 5 C 0.00 -0.02 9.12 22.25 0.20 0.19 16 6 C -0.10 -0.89 6.87 36.47 0.25 -0.64 16 7 N 0.03 0.62 4.45 -46.24 -0.21 0.41 16 8 O -0.20 -3.94 18.45 18.89 0.35 -3.59 16 9 O -0.17 -3.82 17.24 25.60 0.44 -3.38 16 10 C 0.19 0.36 6.67 22.51 0.15 0.51 16 11 O -0.29 -1.50 7.68 -63.42 -0.49 -1.99 16 12 C 0.02 -0.16 5.22 71.24 0.37 0.21 16 13 C 0.51 0.60 7.91 87.66 0.69 1.29 16 14 O -0.56 -8.28 16.12 16.00 0.26 -8.03 16 15 N -0.69 4.04 5.26 -440.03 -2.32 1.73 16 16 C 0.12 -0.35 4.30 45.52 0.20 -0.16 16 17 H 0.09 0.20 7.50 -2.39 -0.02 0.19 16 18 C -0.12 0.77 7.29 31.12 0.23 1.00 16 19 C -0.07 0.37 3.65 -10.93 -0.04 0.33 16 20 H 0.11 -0.67 6.58 -2.38 -0.02 -0.69 16 21 C -0.07 0.13 5.29 -19.84 -0.11 0.03 16 22 C -0.05 0.01 6.31 22.32 0.14 0.15 16 23 Cl -0.07 0.07 27.16 -2.72 -0.07 -0.01 16 24 C -0.12 0.11 9.83 22.29 0.22 0.33 16 25 C -0.12 0.32 10.05 22.26 0.22 0.54 16 26 C -0.12 0.38 10.05 22.27 0.22 0.60 16 27 C -0.11 0.33 8.62 22.27 0.19 0.52 16 28 C -0.14 0.47 7.27 31.21 0.23 0.70 16 29 C -0.19 1.71 9.04 22.37 0.20 1.91 16 30 C -0.01 0.07 8.66 22.25 0.19 0.26 16 31 H 0.40 -3.68 8.74 -74.05 -0.65 -4.33 16 32 H 0.10 -0.91 7.96 -2.38 -0.02 -0.93 16 33 H -0.28 1.28 7.11 99.48 0.71 1.99 16 34 H -0.29 1.04 7.11 99.48 0.71 1.75 16 35 H 0.15 0.76 7.61 -2.91 -0.02 0.74 16 36 H 0.15 -2.31 7.66 -2.39 -0.02 -2.32 16 37 H 0.14 -2.16 7.66 -2.39 -0.02 -2.17 16 38 H 0.42 -5.75 8.70 -92.71 -0.81 -6.55 16 39 H 0.10 -0.66 7.73 -2.39 -0.02 -0.68 16 40 H 0.09 -0.76 8.14 -2.39 -0.02 -0.78 16 41 H 0.14 -0.43 8.06 -2.91 -0.02 -0.45 16 42 H 0.15 -0.96 8.06 -2.91 -0.02 -0.99 16 43 H 0.15 -1.02 8.06 -2.91 -0.02 -1.04 16 44 H 0.15 -0.86 6.65 -2.91 -0.02 -0.88 16 45 H 0.07 -0.11 8.14 -2.39 -0.02 -0.13 16 46 H 0.10 -0.36 6.31 -2.39 -0.02 -0.38 16 47 H 0.21 -4.04 6.30 -2.91 -0.02 -4.06 16 48 H 0.19 -3.09 4.87 -2.91 -0.01 -3.10 16 Total: 0.00 -38.94 422.21 1.42 -37.52 By element: Atomic # 1 Polarization: -24.48 SS G_CDS: -0.35 Total: -24.83 kcal Atomic # 6 Polarization: 5.13 SS G_CDS: 3.66 Total: 8.79 kcal Atomic # 7 Polarization: 4.66 SS G_CDS: -2.52 Total: 2.14 kcal Atomic # 8 Polarization: -16.70 SS G_CDS: -1.34 Total: -18.03 kcal Atomic # 14 Polarization: -7.62 SS G_CDS: 2.04 Total: -5.58 kcal Atomic # 17 Polarization: 0.07 SS G_CDS: -0.07 Total: -0.01 kcal Total: -38.94 1.42 -37.52 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10565092_4549638.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 22.495 kcal (2) G-P(sol) polarization free energy of solvation -38.943 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -16.448 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.423 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.521 kcal (6) G-S(sol) free energy of system = (1) + (5) -15.026 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.62 seconds