Wall clock time and date at job start Sat Mar 6 2021 13:16:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86304 * 109.46684 * 2 1 4 4 C 1.50700 * 109.46776 * 240.00625 * 2 1 3 5 5 C 1.38268 * 119.94274 * 119.72314 * 4 2 1 6 6 C 1.38149 * 120.05738 * 180.27561 * 5 4 2 7 7 C 1.38729 * 119.94092 * 359.97438 * 6 5 4 8 8 O 1.35900 * 120.05757 * 180.02562 * 7 6 5 9 9 C 1.42904 * 116.99760 * 359.97438 * 8 7 6 10 10 F 1.39897 * 109.46846 * 299.99959 * 9 8 7 11 11 F 1.39901 * 109.47245 * 59.99805 * 9 8 7 12 12 C 1.50703 * 109.47031 * 179.97438 * 9 8 7 13 13 O 1.21278 * 120.00089 * 359.97438 * 12 9 8 14 14 N 1.34773 * 119.99605 * 180.02562 * 12 9 8 15 15 C 1.46501 * 119.99557 * 180.02562 * 14 12 9 16 16 H 1.09000 * 112.84808 * 334.65859 * 15 14 12 17 17 C 1.53785 * 113.61746 * 105.86351 * 15 14 12 18 18 C 1.54049 * 86.98402 * 89.15822 * 17 15 14 19 19 H 1.09001 * 113.61061 * 270.88315 * 18 17 15 20 20 C 1.50700 * 113.61701 * 139.98182 * 18 17 15 21 21 C 1.38333 * 120.01043 * 142.50316 * 20 18 17 22 22 Cl 1.73606 * 120.00921 * 359.97438 * 21 20 18 23 23 C 1.38370 * 119.97631 * 179.97438 * 21 20 18 24 24 C 1.38193 * 119.98493 * 359.97438 * 23 21 20 25 25 C 1.38252 * 120.01548 * 0.02562 * 24 23 21 26 26 C 1.38228 * 120.02758 * 359.70101 * 25 24 23 27 27 C 1.53778 * 87.08225 * 25.43187 * 18 17 15 28 28 C 1.38737 * 119.89071 * 359.97438 * 7 6 5 29 29 C 1.38142 * 119.94357 * 0.02562 * 28 7 6 30 30 H 0.96696 * 114.00719 * 59.99623 * 1 2 3 31 31 H 1.08990 * 109.47585 * 120.00203 * 2 1 3 32 32 H 1.48503 * 109.99746 * 60.00839 * 3 2 1 33 33 H 1.48500 * 109.99683 * 181.31812 * 3 2 1 34 34 H 1.08005 * 119.97210 * 0.24927 * 5 4 2 35 35 H 1.07998 * 120.03168 * 180.02562 * 6 5 4 36 36 H 0.97002 * 120.00324 * 359.97438 * 14 12 9 37 37 H 1.08998 * 113.61439 * 203.66159 * 17 15 14 38 38 H 1.08999 * 113.60675 * 334.56112 * 17 15 14 39 39 H 1.08001 * 120.00823 * 179.97438 * 23 21 20 40 40 H 1.08002 * 119.98891 * 179.97438 * 24 23 21 41 41 H 1.08003 * 119.98893 * 179.97438 * 25 24 23 42 42 H 1.07998 * 119.99359 * 180.30307 * 26 25 24 43 43 H 1.08997 * 113.61402 * 220.02177 * 27 18 17 44 44 H 1.09008 * 113.61277 * 89.11422 * 27 18 17 45 45 H 1.08001 * 120.03090 * 180.02562 * 28 7 6 46 46 H 1.07997 * 119.97374 * 180.02562 * 29 28 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9312 -0.7103 -1.2306 5 6 2.7213 -0.0355 -2.1428 6 6 3.1783 -0.6826 -3.2745 7 6 2.8443 -2.0109 -3.4950 8 8 3.2930 -2.6500 -4.6073 9 6 4.1042 -1.8929 -5.5077 10 9 3.3795 -0.7908 -5.9740 11 9 5.2511 -1.4485 -4.8410 12 6 4.5054 -2.7603 -6.6729 13 8 4.1338 -3.9135 -6.7267 14 7 5.2782 -2.2549 -7.6546 15 6 5.6678 -3.0980 -8.7876 16 1 5.6707 -4.1603 -8.5433 17 6 4.9175 -2.7670 -10.0885 18 6 6.0424 -1.7571 -10.3846 19 1 5.8548 -0.7632 -9.9782 20 6 6.4637 -1.7295 -11.8312 21 6 6.8003 -0.5292 -12.4310 22 17 6.7370 0.9457 -11.5176 23 6 7.1875 -0.5048 -13.7592 24 6 7.2383 -1.6793 -14.4856 25 6 6.9017 -2.8785 -13.8856 26 6 6.5202 -2.9044 -12.5573 27 6 6.9485 -2.6251 -9.4956 28 6 2.0523 -2.6861 -2.5777 29 6 1.5978 -2.0345 -1.4476 30 1 -0.3934 0.4417 -0.7649 31 1 1.7924 -0.5138 0.8899 32 1 1.5614 2.4678 1.2086 33 1 3.5345 1.7704 -0.0321 34 1 2.9811 0.9987 -1.9706 35 1 3.7958 -0.1552 -3.9866 36 1 5.5758 -1.3326 -7.6114 37 1 4.8793 -3.5972 -10.7938 38 1 3.9444 -2.3037 -9.9255 39 1 7.4501 0.4320 -14.2281 40 1 7.5401 -1.6602 -15.5224 41 1 6.9411 -3.7962 -14.4538 42 1 6.2622 -3.8422 -12.0879 43 1 7.6139 -2.0472 -8.8543 44 1 7.4645 -3.4167 -10.0391 45 1 1.7912 -3.7204 -2.7469 46 1 0.9816 -2.5597 -0.7329 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_10565092_4549640.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:16:14 Heat of formation + Delta-G solvation = -116.470803 kcal Electronic energy + Delta-G solvation = -35706.402715 eV Core-core repulsion = 30418.865234 eV Total energy + Delta-G solvation = -5287.537481 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 410.093 amu Computer time = 1.25 seconds Orbital eigenvalues (eV) -50.82291 -48.79869 -41.91214 -41.30678 -40.63638 -39.37597 -38.91988 -37.47604 -37.23940 -35.07247 -32.42983 -32.13008 -31.90396 -31.80671 -29.07900 -27.00083 -26.65727 -26.03623 -24.54595 -23.87549 -23.03015 -22.65657 -22.36926 -20.61399 -20.53794 -19.71676 -19.61179 -18.63050 -18.37681 -17.64868 -17.34846 -17.01983 -16.78862 -16.63660 -16.46737 -16.31313 -16.18355 -15.79364 -15.68307 -15.41603 -15.32645 -15.25468 -15.18141 -15.03883 -14.94883 -14.90713 -14.66241 -14.35846 -14.28358 -14.15391 -13.78310 -13.60155 -13.58198 -13.17504 -12.97186 -12.85113 -12.57274 -12.35011 -12.33380 -12.11659 -12.02620 -11.83363 -11.66574 -11.51109 -11.48071 -10.57166 -10.48905 -10.15372 -9.97204 -9.70533 -9.51544 -5.07396 0.05705 0.07745 0.15167 0.19161 0.48227 0.69611 1.09842 1.25539 1.59241 1.75197 1.93988 2.01705 2.48572 2.50394 2.71669 3.12634 3.26598 3.38069 3.41027 3.42205 3.54630 3.62638 3.66426 3.74563 3.75210 3.89933 3.94407 4.10747 4.19174 4.22033 4.23213 4.34291 4.41309 4.47184 4.50940 4.51238 4.56955 4.62999 4.75064 4.79929 4.82858 4.83272 4.94564 5.08382 5.10592 5.15185 5.32754 5.36060 5.37516 5.41660 5.69837 5.75823 5.89041 6.39407 6.53942 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.540 6.540 2 C -0.065 4.065 3 Si 0.686 3.314 4 C -0.142 4.142 5 C -0.078 4.078 6 C -0.186 4.186 7 C 0.107 3.893 8 O -0.286 6.286 9 C 0.432 3.568 10 F -0.174 7.174 11 F -0.175 7.175 12 C 0.520 3.480 13 O -0.465 6.465 14 N -0.688 5.688 15 C 0.118 3.882 16 H 0.115 0.885 17 C -0.141 4.141 18 C -0.083 4.083 19 H 0.107 0.893 20 C -0.063 4.063 21 C -0.033 4.033 22 Cl -0.067 7.067 23 C -0.108 4.108 24 C -0.110 4.110 25 C -0.111 4.111 26 C -0.106 4.106 27 C -0.131 4.131 28 C -0.126 4.126 29 C -0.056 4.056 30 H 0.380 0.620 31 H 0.116 0.884 32 H -0.253 1.253 33 H -0.257 1.257 34 H 0.134 0.866 35 H 0.136 0.864 36 H 0.411 0.589 37 H 0.102 0.898 38 H 0.080 0.920 39 H 0.134 0.866 40 H 0.133 0.867 41 H 0.130 0.870 42 H 0.133 0.867 43 H 0.083 0.917 44 H 0.106 0.894 45 H 0.141 0.859 46 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.723 1.345 -4.869 5.337 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.345 6.345 2 C -0.176 4.176 3 Si 0.588 3.412 4 C -0.143 4.143 5 C -0.095 4.095 6 C -0.205 4.205 7 C 0.063 3.937 8 O -0.202 6.202 9 C 0.354 3.646 10 F -0.155 7.155 11 F -0.156 7.156 12 C 0.297 3.703 13 O -0.335 6.335 14 N -0.341 5.341 15 C 0.013 3.987 16 H 0.133 0.867 17 C -0.179 4.179 18 C -0.101 4.101 19 H 0.125 0.875 20 C -0.064 4.064 21 C -0.059 4.059 22 Cl -0.038 7.038 23 C -0.127 4.127 24 C -0.128 4.128 25 C -0.129 4.129 26 C -0.124 4.124 27 C -0.169 4.169 28 C -0.144 4.144 29 C -0.074 4.074 30 H 0.227 0.773 31 H 0.133 0.867 32 H -0.178 1.178 33 H -0.182 1.182 34 H 0.151 0.849 35 H 0.154 0.846 36 H 0.247 0.753 37 H 0.121 0.879 38 H 0.099 0.901 39 H 0.152 0.848 40 H 0.150 0.850 41 H 0.148 0.852 42 H 0.151 0.849 43 H 0.101 0.899 44 H 0.124 0.876 45 H 0.159 0.841 46 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges 1.992 0.747 -3.885 4.430 hybrid contribution 0.430 0.498 0.154 0.676 sum 2.423 1.245 -3.731 4.620 Atomic orbital electron populations 1.86505 1.16995 1.81683 1.49311 1.25001 0.85297 1.09992 0.97269 0.94762 0.81023 0.78101 0.87344 1.20375 1.00640 0.95498 0.97777 1.20806 0.96397 0.99352 0.92971 1.21469 1.04630 0.93606 1.00772 1.18982 0.96499 0.91768 0.86401 1.86671 1.63791 1.38308 1.31434 1.21803 0.76756 0.79439 0.86582 1.93197 1.77990 1.55635 1.88680 1.93198 1.50697 1.89850 1.81855 1.19285 0.80902 0.87631 0.82441 1.90877 1.51412 1.15622 1.75585 1.45468 1.50865 1.16391 1.21379 1.22059 0.96050 0.96171 0.84371 0.86702 1.23638 0.98359 0.99456 0.96490 1.21817 0.97020 1.00162 0.91116 0.87506 1.19496 0.99543 0.91631 0.95716 1.20865 1.04658 0.87325 0.93069 1.98376 1.96919 1.34269 1.74269 1.21115 0.99668 0.99653 0.92229 1.21186 0.99397 0.91897 1.00330 1.21299 0.98185 0.98487 0.94941 1.21009 0.99726 0.97438 0.94231 1.23428 0.95705 1.00110 0.97621 1.20540 0.99179 1.01248 0.93465 1.20888 0.97131 0.93480 0.95877 0.77287 0.86714 1.17778 1.18228 0.84872 0.84627 0.75332 0.87929 0.90097 0.84826 0.84954 0.85164 0.84888 0.89875 0.87594 0.84125 0.84224 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.04 12.77 -35.23 -0.45 -0.49 16 2 C -0.06 0.02 2.82 36.01 0.10 0.12 16 3 Si 0.69 -0.71 29.78 -169.99 -5.06 -5.77 16 4 C -0.14 -0.05 5.39 -104.60 -0.56 -0.61 16 5 C -0.08 -0.02 8.66 -39.60 -0.34 -0.36 16 6 C -0.19 -0.27 8.26 -39.43 -0.33 -0.59 16 7 C 0.11 0.28 6.48 -39.22 -0.25 0.02 16 8 O -0.29 -0.99 9.60 -39.33 -0.38 -1.37 16 9 C 0.43 0.68 2.05 36.01 0.07 0.75 16 10 F -0.17 -0.14 15.29 2.25 0.03 -0.11 16 11 F -0.17 -0.19 15.29 2.25 0.03 -0.15 16 12 C 0.52 0.78 7.34 -10.99 -0.08 0.70 16 13 O -0.47 -2.17 16.12 -14.35 -0.23 -2.40 16 14 N -0.69 1.08 5.26 -53.01 -0.28 0.80 16 15 C 0.12 -0.26 4.30 -67.11 -0.29 -0.55 16 16 H 0.12 -0.16 7.50 -51.93 -0.39 -0.55 16 17 C -0.14 0.35 7.27 -25.78 -0.19 0.16 16 18 C -0.08 0.19 3.65 -90.82 -0.33 -0.14 16 19 H 0.11 -0.23 6.58 -51.93 -0.34 -0.57 16 20 C -0.06 0.07 5.29 -104.59 -0.55 -0.49 16 21 C -0.03 0.00 6.31 -39.50 -0.25 -0.25 16 22 Cl -0.07 -0.01 27.16 -51.86 -1.41 -1.42 16 23 C -0.11 0.06 9.83 -39.55 -0.39 -0.33 16 24 C -0.11 0.15 10.04 -39.59 -0.40 -0.24 16 25 C -0.11 0.20 10.05 -39.58 -0.40 -0.20 16 26 C -0.11 0.20 8.60 -39.59 -0.34 -0.14 16 27 C -0.13 0.43 7.29 -25.92 -0.19 0.24 16 28 C -0.13 -0.19 9.99 -39.43 -0.39 -0.59 16 29 C -0.06 -0.04 9.61 -39.61 -0.38 -0.42 16 30 H 0.38 -1.40 8.70 45.56 0.40 -1.00 16 31 H 0.12 0.00 7.96 -51.93 -0.41 -0.42 16 32 H -0.25 -0.55 7.11 56.52 0.40 -0.15 16 33 H -0.26 -0.33 7.11 56.52 0.40 0.07 16 34 H 0.13 -0.24 4.87 -52.48 -0.26 -0.49 16 35 H 0.14 0.08 5.10 -52.49 -0.27 -0.19 16 36 H 0.41 -1.48 8.70 -40.82 -0.36 -1.83 16 37 H 0.10 -0.34 6.33 -51.93 -0.33 -0.67 16 38 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 39 H 0.13 -0.21 8.06 -52.49 -0.42 -0.64 16 40 H 0.13 -0.42 8.06 -52.49 -0.42 -0.84 16 41 H 0.13 -0.46 8.06 -52.48 -0.42 -0.88 16 42 H 0.13 -0.49 6.68 -52.49 -0.35 -0.84 16 43 H 0.08 -0.29 8.14 -51.93 -0.42 -0.72 16 44 H 0.11 -0.41 7.71 -51.92 -0.40 -0.81 16 45 H 0.14 0.06 8.06 -52.49 -0.42 -0.36 16 46 H 0.14 -0.06 8.06 -52.49 -0.42 -0.49 16 LS Contribution 405.43 15.07 6.11 6.11 Total: 0.00 -7.66 405.43 -11.98 -19.65 By element: Atomic # 1 Polarization: -7.05 SS G_CDS: -4.86 Total: -11.92 kcal Atomic # 6 Polarization: 2.56 SS G_CDS: -5.49 Total: -2.93 kcal Atomic # 7 Polarization: 1.08 SS G_CDS: -0.28 Total: 0.80 kcal Atomic # 8 Polarization: -3.20 SS G_CDS: -1.06 Total: -4.26 kcal Atomic # 9 Polarization: -0.33 SS G_CDS: 0.07 Total: -0.26 kcal Atomic # 14 Polarization: -0.71 SS G_CDS: -5.06 Total: -5.77 kcal Atomic # 17 Polarization: -0.01 SS G_CDS: -1.41 Total: -1.42 kcal Total LS contribution 6.11 Total: 6.11 kcal Total: -7.66 -11.98 -19.65 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10565092_4549640.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -96.822 kcal (2) G-P(sol) polarization free energy of solvation -7.665 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -104.487 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.984 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.649 kcal (6) G-S(sol) free energy of system = (1) + (5) -116.471 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.25 seconds