Wall clock time and date at job start Sat Mar 6 2021 13:16:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86304 * 109.46684 * 2 1 4 4 C 1.50700 * 109.46776 * 240.00625 * 2 1 3 5 5 C 1.38268 * 119.94274 * 119.72314 * 4 2 1 6 6 C 1.38149 * 120.05738 * 180.27561 * 5 4 2 7 7 C 1.38729 * 119.94092 * 359.97438 * 6 5 4 8 8 O 1.35900 * 120.05757 * 180.02562 * 7 6 5 9 9 C 1.42904 * 116.99760 * 359.97438 * 8 7 6 10 10 F 1.39897 * 109.46846 * 299.99959 * 9 8 7 11 11 F 1.39901 * 109.47245 * 59.99805 * 9 8 7 12 12 C 1.50703 * 109.47031 * 179.97438 * 9 8 7 13 13 O 1.21278 * 120.00089 * 359.97438 * 12 9 8 14 14 N 1.34773 * 119.99605 * 180.02562 * 12 9 8 15 15 C 1.46501 * 119.99557 * 180.02562 * 14 12 9 16 16 H 1.09000 * 112.84808 * 334.65859 * 15 14 12 17 17 C 1.53785 * 113.61746 * 105.86351 * 15 14 12 18 18 C 1.54049 * 86.98402 * 89.15822 * 17 15 14 19 19 H 1.09001 * 113.61061 * 270.88315 * 18 17 15 20 20 C 1.50700 * 113.61701 * 139.98182 * 18 17 15 21 21 C 1.38333 * 120.01043 * 142.50316 * 20 18 17 22 22 Cl 1.73606 * 120.00921 * 359.97438 * 21 20 18 23 23 C 1.38370 * 119.97631 * 179.97438 * 21 20 18 24 24 C 1.38193 * 119.98493 * 359.97438 * 23 21 20 25 25 C 1.38252 * 120.01548 * 0.02562 * 24 23 21 26 26 C 1.38228 * 120.02758 * 359.70101 * 25 24 23 27 27 C 1.53778 * 87.08225 * 25.43187 * 18 17 15 28 28 C 1.38737 * 119.89071 * 359.97438 * 7 6 5 29 29 C 1.38142 * 119.94357 * 0.02562 * 28 7 6 30 30 H 0.96696 * 114.00719 * 59.99623 * 1 2 3 31 31 H 1.08990 * 109.47585 * 120.00203 * 2 1 3 32 32 H 1.48503 * 109.99746 * 60.00839 * 3 2 1 33 33 H 1.48500 * 109.99683 * 181.31812 * 3 2 1 34 34 H 1.08005 * 119.97210 * 0.24927 * 5 4 2 35 35 H 1.07998 * 120.03168 * 180.02562 * 6 5 4 36 36 H 0.97002 * 120.00324 * 359.97438 * 14 12 9 37 37 H 1.08998 * 113.61439 * 203.66159 * 17 15 14 38 38 H 1.08999 * 113.60675 * 334.56112 * 17 15 14 39 39 H 1.08001 * 120.00823 * 179.97438 * 23 21 20 40 40 H 1.08002 * 119.98891 * 179.97438 * 24 23 21 41 41 H 1.08003 * 119.98893 * 179.97438 * 25 24 23 42 42 H 1.07998 * 119.99359 * 180.30307 * 26 25 24 43 43 H 1.08997 * 113.61402 * 220.02177 * 27 18 17 44 44 H 1.09008 * 113.61277 * 89.11422 * 27 18 17 45 45 H 1.08001 * 120.03090 * 180.02562 * 28 7 6 46 46 H 1.07997 * 119.97374 * 180.02562 * 29 28 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9312 -0.7103 -1.2306 5 6 2.7213 -0.0355 -2.1428 6 6 3.1783 -0.6826 -3.2745 7 6 2.8443 -2.0109 -3.4950 8 8 3.2930 -2.6500 -4.6073 9 6 4.1042 -1.8929 -5.5077 10 9 3.3795 -0.7908 -5.9740 11 9 5.2511 -1.4485 -4.8410 12 6 4.5054 -2.7603 -6.6729 13 8 4.1338 -3.9135 -6.7267 14 7 5.2782 -2.2549 -7.6546 15 6 5.6678 -3.0980 -8.7876 16 1 5.6707 -4.1603 -8.5433 17 6 4.9175 -2.7670 -10.0885 18 6 6.0424 -1.7571 -10.3846 19 1 5.8548 -0.7632 -9.9782 20 6 6.4637 -1.7295 -11.8312 21 6 6.8003 -0.5292 -12.4310 22 17 6.7370 0.9457 -11.5176 23 6 7.1875 -0.5048 -13.7592 24 6 7.2383 -1.6793 -14.4856 25 6 6.9017 -2.8785 -13.8856 26 6 6.5202 -2.9044 -12.5573 27 6 6.9485 -2.6251 -9.4956 28 6 2.0523 -2.6861 -2.5777 29 6 1.5978 -2.0345 -1.4476 30 1 -0.3934 0.4417 -0.7649 31 1 1.7924 -0.5138 0.8899 32 1 1.5614 2.4678 1.2086 33 1 3.5345 1.7704 -0.0321 34 1 2.9811 0.9987 -1.9706 35 1 3.7958 -0.1552 -3.9866 36 1 5.5758 -1.3326 -7.6114 37 1 4.8793 -3.5972 -10.7938 38 1 3.9444 -2.3037 -9.9255 39 1 7.4501 0.4320 -14.2281 40 1 7.5401 -1.6602 -15.5224 41 1 6.9411 -3.7962 -14.4538 42 1 6.2622 -3.8422 -12.0879 43 1 7.6139 -2.0472 -8.8543 44 1 7.4645 -3.4167 -10.0391 45 1 1.7912 -3.7204 -2.7469 46 1 0.9816 -2.5597 -0.7329 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_10565092_4549640.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 13:16:12 Heat of formation + Delta-G solvation = -110.879119 kcal Electronic energy + Delta-G solvation = -35706.160242 eV Core-core repulsion = 30418.865234 eV Total energy + Delta-G solvation = -5287.295008 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 410.093 amu Computer time = 1.51 seconds Orbital eigenvalues (eV) -50.92255 -48.89270 -41.85273 -41.37865 -40.62386 -39.38932 -38.89312 -37.41165 -37.25004 -35.07339 -32.47593 -32.10409 -31.86055 -31.65861 -29.14025 -26.79177 -26.60866 -25.98798 -24.57637 -23.75577 -22.99752 -22.60740 -22.41992 -20.67689 -20.47231 -19.72650 -19.71437 -18.61570 -18.27448 -17.67538 -17.37649 -16.97028 -16.76303 -16.52284 -16.48075 -16.30283 -16.19655 -15.84328 -15.72475 -15.45275 -15.38105 -15.20768 -15.18508 -15.13482 -14.86533 -14.76525 -14.54736 -14.41793 -14.37053 -14.24089 -13.62673 -13.61226 -13.43030 -13.04059 -13.00629 -12.72199 -12.48885 -12.40456 -12.18678 -12.15434 -11.91351 -11.86767 -11.66682 -11.48552 -11.33464 -10.52587 -10.47846 -10.20728 -9.83279 -9.59647 -9.58336 -5.01786 0.00053 0.14023 0.18561 0.29423 0.42234 0.59002 1.17334 1.29452 1.61184 1.64896 1.94573 1.95994 2.44545 2.63379 2.71508 3.18897 3.30790 3.47688 3.52966 3.54525 3.57905 3.63909 3.73522 3.81611 3.92453 4.07583 4.09068 4.14861 4.19600 4.37915 4.38822 4.38993 4.46544 4.50357 4.68471 4.70970 4.74642 4.78234 4.81176 4.88691 4.95398 4.96898 5.01392 5.02797 5.25254 5.30758 5.33020 5.36981 5.49519 5.51788 5.78348 5.83036 5.87529 6.40573 6.76181 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.554 6.554 2 C -0.068 4.068 3 Si 0.770 3.230 4 C -0.141 4.141 5 C -0.078 4.078 6 C -0.193 4.193 7 C 0.085 3.915 8 O -0.304 6.304 9 C 0.434 3.566 10 F -0.170 7.170 11 F -0.172 7.172 12 C 0.521 3.479 13 O -0.503 6.503 14 N -0.671 5.671 15 C 0.113 3.887 16 H 0.109 0.891 17 C -0.137 4.137 18 C -0.082 4.082 19 H 0.103 0.897 20 C -0.069 4.069 21 C -0.050 4.050 22 Cl -0.077 7.077 23 C -0.122 4.122 24 C -0.117 4.117 25 C -0.116 4.116 26 C -0.110 4.110 27 C -0.119 4.119 28 C -0.135 4.135 29 C -0.058 4.058 30 H 0.396 0.604 31 H 0.112 0.888 32 H -0.297 1.297 33 H -0.285 1.285 34 H 0.154 0.846 35 H 0.141 0.859 36 H 0.421 0.579 37 H 0.114 0.886 38 H 0.071 0.929 39 H 0.137 0.863 40 H 0.147 0.853 41 H 0.149 0.851 42 H 0.152 0.848 43 H 0.088 0.912 44 H 0.117 0.883 45 H 0.145 0.855 46 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.989 1.388 -5.374 5.896 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.362 6.362 2 C -0.178 4.178 3 Si 0.676 3.324 4 C -0.142 4.142 5 C -0.095 4.095 6 C -0.212 4.212 7 C 0.043 3.957 8 O -0.221 6.221 9 C 0.356 3.644 10 F -0.151 7.151 11 F -0.153 7.153 12 C 0.299 3.701 13 O -0.376 6.376 14 N -0.324 5.324 15 C 0.009 3.991 16 H 0.127 0.873 17 C -0.175 4.175 18 C -0.100 4.100 19 H 0.121 0.879 20 C -0.070 4.070 21 C -0.077 4.077 22 Cl -0.048 7.048 23 C -0.141 4.141 24 C -0.136 4.136 25 C -0.134 4.134 26 C -0.127 4.127 27 C -0.157 4.157 28 C -0.153 4.153 29 C -0.076 4.076 30 H 0.246 0.754 31 H 0.130 0.870 32 H -0.225 1.225 33 H -0.212 1.212 34 H 0.171 0.829 35 H 0.159 0.841 36 H 0.259 0.741 37 H 0.132 0.868 38 H 0.090 0.910 39 H 0.155 0.845 40 H 0.165 0.835 41 H 0.167 0.833 42 H 0.170 0.830 43 H 0.107 0.893 44 H 0.135 0.865 45 H 0.163 0.837 46 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges 2.263 0.812 -4.431 5.041 hybrid contribution 0.345 0.505 0.311 0.686 sum 2.608 1.317 -4.120 5.051 Atomic orbital electron populations 1.86472 1.17025 1.82131 1.50539 1.25105 0.85382 1.10538 0.96798 0.93779 0.77935 0.75602 0.85058 1.20497 1.00352 0.95432 0.97909 1.21026 0.95882 1.00233 0.92394 1.21606 1.04858 0.93331 1.01370 1.19243 0.97407 0.92474 0.86620 1.86645 1.64246 1.39220 1.31978 1.21767 0.76694 0.79484 0.86423 1.93199 1.77934 1.55378 1.88593 1.93197 1.50497 1.89807 1.81841 1.19339 0.80908 0.87140 0.82720 1.90855 1.53215 1.17069 1.76490 1.45469 1.49373 1.16956 1.20644 1.22158 0.97029 0.95802 0.84099 0.87326 1.23642 0.97786 0.99716 0.96377 1.21795 0.97312 1.00133 0.90746 0.87885 1.19662 0.99486 0.91603 0.96267 1.21051 1.05782 0.87406 0.93434 1.98365 1.97030 1.34899 1.74483 1.21288 1.00127 1.00339 0.92347 1.21440 0.99233 0.91785 1.01098 1.21603 0.97502 0.99079 0.95190 1.21278 0.99233 0.97879 0.94350 1.23407 0.95114 1.00096 0.97083 1.20706 0.99281 1.01661 0.93700 1.21046 0.97063 0.93771 0.95706 0.75414 0.87050 1.22493 1.21184 0.82926 0.84100 0.74062 0.86810 0.91046 0.84516 0.83486 0.83348 0.83036 0.89332 0.86491 0.83699 0.83247 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.30 12.77 -148.98 -1.90 -1.60 16 2 C -0.07 0.07 2.82 71.24 0.20 0.28 16 3 Si 0.77 -1.91 29.78 68.60 2.04 0.13 16 4 C -0.14 -0.05 5.39 -19.85 -0.11 -0.15 16 5 C -0.08 0.00 8.66 22.26 0.19 0.19 16 6 C -0.19 -0.60 8.26 22.37 0.18 -0.41 16 7 C 0.09 0.52 6.48 22.51 0.15 0.66 16 8 O -0.30 -2.51 9.60 -73.38 -0.70 -3.21 16 9 C 0.43 1.73 2.05 71.24 0.15 1.88 16 10 F -0.17 -0.37 15.29 44.97 0.69 0.32 16 11 F -0.17 -0.45 15.29 44.97 0.69 0.24 16 12 C 0.52 2.03 7.34 87.66 0.64 2.68 16 13 O -0.50 -5.42 16.12 16.01 0.26 -5.16 16 14 N -0.67 1.91 5.26 -440.02 -2.32 -0.41 16 15 C 0.11 -0.50 4.30 45.52 0.20 -0.31 16 16 H 0.11 -0.28 7.50 -2.39 -0.02 -0.29 16 17 C -0.14 0.70 7.27 31.21 0.23 0.92 16 18 C -0.08 0.40 3.65 -10.92 -0.04 0.36 16 19 H 0.10 -0.43 6.58 -2.39 -0.02 -0.44 16 20 C -0.07 0.16 5.29 -19.84 -0.11 0.06 16 21 C -0.05 -0.02 6.31 22.32 0.14 0.13 16 22 Cl -0.08 -0.07 27.16 -2.72 -0.07 -0.14 16 23 C -0.12 0.09 9.83 22.29 0.22 0.31 16 24 C -0.12 0.37 10.04 22.26 0.22 0.60 16 25 C -0.12 0.53 10.05 22.27 0.22 0.75 16 26 C -0.11 0.51 8.60 22.27 0.19 0.70 16 27 C -0.12 0.87 7.29 31.12 0.23 1.10 16 28 C -0.14 -0.52 9.99 22.37 0.22 -0.30 16 29 C -0.06 -0.08 9.61 22.25 0.21 0.13 16 30 H 0.40 -3.30 8.70 -74.06 -0.64 -3.94 16 31 H 0.11 -0.04 7.96 -2.39 -0.02 -0.06 16 32 H -0.30 -1.48 7.11 99.48 0.71 -0.77 16 33 H -0.28 -0.62 7.11 99.48 0.71 0.09 16 34 H 0.15 -0.71 4.87 -2.91 -0.01 -0.72 16 35 H 0.14 0.19 5.10 -2.91 -0.01 0.17 16 36 H 0.42 -3.03 8.70 -92.71 -0.81 -3.84 16 37 H 0.11 -0.84 6.33 -2.39 -0.02 -0.85 16 38 H 0.07 -0.20 8.14 -2.39 -0.02 -0.22 16 39 H 0.14 -0.33 8.06 -2.91 -0.02 -0.36 16 40 H 0.15 -1.02 8.06 -2.91 -0.02 -1.05 16 41 H 0.15 -1.29 8.06 -2.91 -0.02 -1.31 16 42 H 0.15 -1.36 6.68 -2.91 -0.02 -1.38 16 43 H 0.09 -0.70 8.14 -2.39 -0.02 -0.72 16 44 H 0.12 -1.06 7.71 -2.38 -0.02 -1.08 16 45 H 0.15 0.30 8.06 -2.91 -0.02 0.27 16 46 H 0.15 -0.15 8.06 -2.91 -0.02 -0.18 16 Total: 0.00 -18.68 405.43 1.70 -16.98 By element: Atomic # 1 Polarization: -16.37 SS G_CDS: -0.33 Total: -16.69 kcal Atomic # 6 Polarization: 6.21 SS G_CDS: 3.35 Total: 9.56 kcal Atomic # 7 Polarization: 1.91 SS G_CDS: -2.32 Total: -0.41 kcal Atomic # 8 Polarization: -7.63 SS G_CDS: -2.35 Total: -9.98 kcal Atomic # 9 Polarization: -0.82 SS G_CDS: 1.38 Total: 0.56 kcal Atomic # 14 Polarization: -1.91 SS G_CDS: 2.04 Total: 0.13 kcal Atomic # 17 Polarization: -0.07 SS G_CDS: -0.07 Total: -0.14 kcal Total: -18.68 1.70 -16.98 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_10565092_4549640.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -93.901 kcal (2) G-P(sol) polarization free energy of solvation -18.677 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -112.578 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.699 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.978 kcal (6) G-S(sol) free energy of system = (1) + (5) -110.879 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.51 seconds